Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20054 and SM_b20055 are separated by 147 nucleotides
SM_b20054: SM_b20054 - non-heme chloroperoxidase, at 63,020 to 63,847
_b20054
SM_b20055: SM_b20055 - transcriptional regulator, at 63,995 to 64,984
_b20055
Position (kb)
63
64
65 Strain fitness (log2 ratio)
-2
-1
0
1 at 62.999 kb on - strand at 62.999 kb on - strand at 62.999 kb on - strand at 63.066 kb on + strand at 63.066 kb on + strand at 63.066 kb on + strand at 63.066 kb on + strand at 63.067 kb on - strand at 63.067 kb on - strand at 63.099 kb on + strand at 63.110 kb on + strand, within SM_b20054 at 63.351 kb on + strand, within SM_b20054 at 63.352 kb on - strand, within SM_b20054 at 63.397 kb on - strand, within SM_b20054 at 63.699 kb on + strand, within SM_b20054 at 63.737 kb on + strand, within SM_b20054 at 63.737 kb on + strand, within SM_b20054 at 63.807 kb on + strand at 63.807 kb on + strand at 63.807 kb on + strand at 63.895 kb on + strand at 63.895 kb on + strand at 63.895 kb on + strand at 63.896 kb on - strand at 63.963 kb on + strand at 63.963 kb on + strand at 63.964 kb on - strand at 63.964 kb on - strand at 64.561 kb on - strand, within SM_b20055 at 64.619 kb on + strand, within SM_b20055 at 64.886 kb on + strand at 64.949 kb on + strand at 64.949 kb on + strand at 64.949 kb on + strand at 65.064 kb on - strand at 65.246 kb on - strand at 65.255 kb on + strand at 65.255 kb on + strand at 65.255 kb on + strand at 65.256 kb on - strand at 65.256 kb on - strand at 65.256 kb on - strand at 65.256 kb on - strand at 65.256 kb on - strand at 65.257 kb on + strand at 65.257 kb on + strand at 65.257 kb on + strand at 65.257 kb on + strand at 65.258 kb on - strand at 65.258 kb on - strand at 65.258 kb on - strand at 65.278 kb on - strand at 65.278 kb on - strand at 65.278 kb on - strand at 65.299 kb on + strand at 65.300 kb on - strand at 65.300 kb on - strand at 65.300 kb on - strand at 65.300 kb on - strand at 65.300 kb on - strand at 65.300 kb on - strand at 65.302 kb on - strand at 65.302 kb on - strand at 65.369 kb on + strand at 65.369 kb on + strand at 65.369 kb on + strand at 65.369 kb on + strand at 65.369 kb on + strand at 65.370 kb on - strand at 65.370 kb on - strand at 65.370 kb on - strand at 65.370 kb on - strand at 65.370 kb on - strand at 65.484 kb on + strand at 65.485 kb on - strand at 65.553 kb on - strand at 65.553 kb on - strand at 65.626 kb on + strand at 65.681 kb on + strand at 65.681 kb on + strand at 65.682 kb on - strand at 65.682 kb on - strand at 65.682 kb on - strand at 65.682 kb on - strand at 65.743 kb on + strand at 65.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 62,999 - -0.1 62,999 - -0.2 62,999 - -0.6 63,066 + -0.1 63,066 + -0.0 63,066 + -0.8 63,066 + -0.2 63,067 - -0.2 63,067 - +0.7 63,099 + +0.2 63,110 + SM_b20054 0.11 -0.3 63,351 + SM_b20054 0.40 -2.3 63,352 - SM_b20054 0.40 +0.4 63,397 - SM_b20054 0.46 -0.2 63,699 + SM_b20054 0.82 -0.6 63,737 + SM_b20054 0.87 +0.1 63,737 + SM_b20054 0.87 -0.5 63,807 + -0.1 63,807 + +0.2 63,807 + +0.5 63,895 + +0.0 63,895 + -1.2 63,895 + +0.2 63,896 - -0.6 63,963 + +0.3 63,963 + -0.0 63,964 - +0.3 63,964 - +0.8 64,561 - SM_b20055 0.57 -1.1 64,619 + SM_b20055 0.63 -1.1 64,886 + -0.1 64,949 + -0.0 64,949 + -0.3 64,949 + +0.3 65,064 - +0.5 65,246 - +0.2 65,255 + -0.8 65,255 + -0.7 65,255 + -1.6 65,256 - -0.1 65,256 - +0.3 65,256 - -0.2 65,256 - -0.5 65,256 - -1.0 65,257 + +0.0 65,257 + +1.7 65,257 + -0.9 65,257 + -0.4 65,258 - -0.3 65,258 - -0.5 65,258 - -0.6 65,278 - +0.7 65,278 - -1.3 65,278 - -0.2 65,299 + -0.4 65,300 - -0.3 65,300 - +0.5 65,300 - +0.7 65,300 - +0.2 65,300 - +0.5 65,300 - -0.5 65,302 - +0.8 65,302 - +0.6 65,369 + -0.6 65,369 + -0.4 65,369 + +0.4 65,369 + -0.9 65,369 + -0.4 65,370 - +0.4 65,370 - -0.2 65,370 - +0.2 65,370 - +0.5 65,370 - +0.1 65,484 + +0.8 65,485 - +0.2 65,553 - +0.8 65,553 - +0.0 65,626 + +0.1 65,681 + -0.2 65,681 + +0.0 65,682 - -0.5 65,682 - +0.2 65,682 - -0.4 65,682 - -0.2 65,743 + +0.5 65,921 - +0.3
Or see this region's nucleotide sequence