Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27860

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
6,199,796	+		PFLU_RS27850	0.87	+4.0
6,199,796	+		PFLU_RS27850	0.87	-0.2
6,199,796	+		PFLU_RS27850	0.87	+1.1
6,199,797	-		PFLU_RS27850	0.87	+0.7
6,199,797	-		PFLU_RS27850	0.87	+2.2
6,199,812	+		PFLU_RS27850	0.88	+1.3
6,199,812	+		PFLU_RS27850	0.88	-1.0
6,199,812	+		PFLU_RS27850	0.88	-1.4
6,199,813	-		PFLU_RS27850	0.88	+2.8
6,199,890	+				+0.5
6,199,939	+				+1.1
6,199,939	+				+1.3
6,199,939	+				-0.9
6,199,939	+				+0.2
6,199,940	-				-1.3
6,199,940	-				+1.9
6,199,940	-				+0.1
6,199,940	-				+0.3
6,199,940	-				-1.4
6,200,034	-				-1.3
6,200,034	-				-2.5
6,200,123	+		PFLU_RS27855	0.18	+0.6
6,200,124	-		PFLU_RS27855	0.18	-0.7
6,200,124	-		PFLU_RS27855	0.18	+0.7
6,200,127	+		PFLU_RS27855	0.19	-0.9
6,200,127	+		PFLU_RS27855	0.19	+0.5
6,200,127	+		PFLU_RS27855	0.19	-0.5
6,200,127	+		PFLU_RS27855	0.19	-0.2
6,200,127	+		PFLU_RS27855	0.19	-2.1
6,200,128	-		PFLU_RS27855	0.19	-0.9
6,200,128	-		PFLU_RS27855	0.19	-0.3
6,200,150	+		PFLU_RS27855	0.21	+0.8
6,200,150	+		PFLU_RS27855	0.21	+1.4
6,200,150	+		PFLU_RS27855	0.21	-0.1
6,200,150	+		PFLU_RS27855	0.21	+0.8
6,200,150	+		PFLU_RS27855	0.21	-1.9
6,200,150	+		PFLU_RS27855	0.21	-0.5
6,200,150	+		PFLU_RS27855	0.21	+0.2
6,200,151	-		PFLU_RS27855	0.21	+0.4
6,200,151	-		PFLU_RS27855	0.21	+1.3
6,200,151	-		PFLU_RS27855	0.21	-2.4
6,200,151	-		PFLU_RS27855	0.21	+1.4
6,200,151	-		PFLU_RS27855	0.21	+0.5
6,200,151	-		PFLU_RS27855	0.21	+0.7
6,200,151	-		PFLU_RS27855	0.21	+0.6
6,200,151	-		PFLU_RS27855	0.21	-0.6
6,200,312	+		PFLU_RS27855	0.41	+0.1
6,200,313	-		PFLU_RS27855	0.41	-0.0
6,200,421	-		PFLU_RS27855	0.55	+0.3
6,200,786	+				+1.2
6,200,786	+				-1.3
6,200,786	+				-1.6
6,200,787	-				-0.9
6,200,787	-				-0.2
6,200,840	+				-0.8
6,200,841	-				+1.4
6,200,847	+				-1.7
6,200,847	+				-0.9
6,200,847	+				-1.5
6,200,848	-				-1.6
6,200,848	-				-2.7
6,200,848	-				-1.3
6,201,157	-		PFLU_RS27860	0.33	-1.2
6,201,210	+		PFLU_RS27860	0.38	-1.1
6,201,210	+		PFLU_RS27860	0.38	-2.6
6,201,210	+		PFLU_RS27860	0.38	-0.2
6,201,211	-		PFLU_RS27860	0.38	-1.1
6,201,211	-		PFLU_RS27860	0.38	-2.7
6,201,211	-		PFLU_RS27860	0.38	-1.9
6,201,217	+		PFLU_RS27860	0.38	-2.9
6,201,217	+		PFLU_RS27860	0.38	-1.3
6,201,218	-		PFLU_RS27860	0.38	-1.6
6,201,356	-		PFLU_RS27860	0.51	-2.1
6,201,393	+		PFLU_RS27860	0.54	-0.8
6,201,393	+		PFLU_RS27860	0.54	-1.5
6,201,393	+		PFLU_RS27860	0.54	-1.6
6,201,394	-		PFLU_RS27860	0.54	-2.7
6,201,394	-		PFLU_RS27860	0.54	-2.5
6,201,394	-		PFLU_RS27860	0.54	-2.5
6,201,394	-		PFLU_RS27860	0.54	-1.7
6,201,394	-		PFLU_RS27860	0.54	-1.7
6,201,394	-		PFLU_RS27860	0.54	-0.0
6,201,394	-		PFLU_RS27860	0.54	-2.9
6,201,460	-		PFLU_RS27860	0.60	-0.4
6,201,460	-		PFLU_RS27860	0.60	-2.6
6,201,460	-		PFLU_RS27860	0.60	-2.6
6,201,460	-		PFLU_RS27860	0.60	-0.6
6,201,460	-		PFLU_RS27860	0.60	-1.3
6,201,513	+		PFLU_RS27860	0.65	-2.1
6,201,513	+		PFLU_RS27860	0.65	-3.2
6,201,513	+		PFLU_RS27860	0.65	-1.2
6,201,514	-		PFLU_RS27860	0.65	-0.4
6,201,514	-		PFLU_RS27860	0.65	-2.4
6,201,514	-		PFLU_RS27860	0.65	-0.8
6,201,514	-		PFLU_RS27860	0.65	-2.5
6,201,660	+		PFLU_RS27860	0.79	-2.7
6,201,690	+		PFLU_RS27860	0.81	-2.7
6,201,690	+		PFLU_RS27860	0.81	-2.3
6,201,690	+		PFLU_RS27860	0.81	-2.1
6,201,691	-		PFLU_RS27860	0.81	+1.4
6,201,691	-		PFLU_RS27860	0.81	-1.2
6,201,691	-		PFLU_RS27860	0.81	-2.6
6,201,923	+				-2.7
6,201,923	+				+0.4
6,201,924	-				-1.1
6,201,924	-				-1.1
6,201,924	-				-1.5
6,201,924	-				+4.7
6,201,924	-				-1.3
6,201,924	-				-0.5
6,201,961	+				-2.5
6,201,961	+				-1.1
6,201,961	+				-2.5
6,201,961	+				-0.9
6,201,961	+				-3.3
6,201,961	+				+0.4
6,201,961	+				-1.6
6,201,961	+				-0.6
6,201,961	+				-2.1
6,201,962	-				-0.9
6,201,962	-				-1.8
6,201,962	-				-1.0
6,201,962	-				+0.3
6,201,962	-				-0.6
6,201,965	+				+0.4
6,201,966	-				+1.4
6,201,966	-				-0.9
6,201,982	+				+0.1
6,201,982	+				-1.4
6,201,982	+				-1.9
6,201,982	+				-0.0
6,201,982	+				-1.8
6,201,982	+				-2.8
6,201,982	+				-2.8
6,201,982	+				-1.7
6,201,982	+				+1.7
6,201,982	+				-2.6
6,201,982	+				-2.1
6,201,982	+				-0.0
6,201,983	-				-1.6
6,201,983	-				+0.1
6,201,983	-				-1.3
6,201,983	-				-0.4
6,201,983	-				+1.1
6,201,983	-				-0.7
6,201,983	-				-2.6
6,201,983	-				-1.7
6,201,983	-				-2.2
6,201,983	-				-0.6
6,201,983	-				+1.6
6,201,983	-				-0.1
6,201,983	-				-0.6
6,201,983	-				-0.6
6,201,983	-				-0.9
6,201,983	-				+1.1
6,201,983	-				+0.1
6,201,983	-				-2.3
6,201,983	-				+0.4
6,201,986	+				-2.5
6,201,986	+				-0.4
6,201,986	+				-2.2
6,201,987	-				-1.0
6,201,987	-				-1.8
6,202,004	+				+2.2
6,202,054	+				+2.5
6,202,054	+				-0.8
6,202,108	+				+0.5
6,202,109	-				-1.1
6,202,131	-				-1.1
6,202,138	+				+0.1
6,202,138	+				-1.5
6,202,138	+				-1.3
6,202,139	-				-1.8
6,202,139	-				-2.2
6,202,139	-				+0.6
6,202,139	-				-2.4
6,202,139	-				+0.8
6,202,139	-				-0.4
6,202,196	-				+0.4
6,202,287	+				-1.6
6,202,287	+				-0.8
6,202,287	+				-2.1
6,202,288	-				+0.4
6,202,288	-				-2.7
6,202,311	-		PFLU_RS27865	0.10	-3.0
6,202,386	+		PFLU_RS27865	0.16	-2.4
6,202,386	+		PFLU_RS27865	0.16	-1.7
6,202,386	+		PFLU_RS27865	0.16	-1.4
6,202,386	+		PFLU_RS27865	0.16	-2.5
6,202,386	+		PFLU_RS27865	0.16	-3.1
6,202,386	+		PFLU_RS27865	0.16	-2.1
6,202,386	+		PFLU_RS27865	0.16	-3.0
6,202,387	-		PFLU_RS27865	0.16	-0.4
6,202,387	-		PFLU_RS27865	0.16	-2.1
6,202,387	-		PFLU_RS27865	0.16	-2.5
6,202,387	-		PFLU_RS27865	0.16	-1.9
6,202,387	-		PFLU_RS27865	0.16	-3.0
6,202,387	-		PFLU_RS27865	0.16	-2.7
6,202,387	-		PFLU_RS27865	0.16	-1.8
6,202,387	-		PFLU_RS27865	0.16	-1.9
6,202,387	-		PFLU_RS27865	0.16	-1.9
6,202,387	-		PFLU_RS27865	0.16	-2.7
6,202,387	-		PFLU_RS27865	0.16	-2.7
6,202,548	+		PFLU_RS27865	0.29	-1.1
6,202,548	+		PFLU_RS27865	0.29	-2.3
6,202,549	-		PFLU_RS27865	0.29	-1.9
6,202,653	+		PFLU_RS27865	0.37	-2.0
6,202,653	+		PFLU_RS27865	0.37	-2.3
6,202,653	+		PFLU_RS27865	0.37	+0.4
6,202,653	+		PFLU_RS27865	0.37	-0.4
6,202,653	+		PFLU_RS27865	0.37	-2.0
6,202,653	+		PFLU_RS27865	0.37	-3.4
6,202,653	+		PFLU_RS27865	0.37	-1.5
6,202,653	+		PFLU_RS27865	0.37	+0.4
6,202,654	-		PFLU_RS27865	0.37	-3.1
6,202,654	-		PFLU_RS27865	0.37	-0.4
6,202,654	-		PFLU_RS27865	0.37	-0.4
6,202,654	-		PFLU_RS27865	0.37	-2.8
6,202,654	-		PFLU_RS27865	0.37	-0.9
6,202,719	+		PFLU_RS27865	0.42	-1.5
6,202,719	+		PFLU_RS27865	0.42	-1.7
6,202,719	+		PFLU_RS27865	0.42	-1.7
6,202,719	+		PFLU_RS27865	0.42	-0.9
6,202,719	+		PFLU_RS27865	0.42	-2.6
6,202,719	+		PFLU_RS27865	0.42	-0.6
6,202,719	+		PFLU_RS27865	0.42	-2.6
6,202,719	+		PFLU_RS27865	0.42	-2.3
6,202,719	+		PFLU_RS27865	0.42	-1.7
6,202,719	+		PFLU_RS27865	0.42	-0.8
6,202,719	+		PFLU_RS27865	0.42	-2.2
6,202,719	+		PFLU_RS27865	0.42	-0.5
6,202,719	+		PFLU_RS27865	0.42	-0.6
6,202,720	-		PFLU_RS27865	0.42	-2.4
6,202,720	-		PFLU_RS27865	0.42	+0.4
6,202,720	-		PFLU_RS27865	0.42	-2.4
6,202,720	-		PFLU_RS27865	0.42	-1.9
6,202,720	-		PFLU_RS27865	0.42	-2.6
6,202,720	-		PFLU_RS27865	0.42	-2.1
6,202,731	+		PFLU_RS27865	0.43	-2.7
6,202,731	+		PFLU_RS27865	0.43	-2.7
6,202,731	+		PFLU_RS27865	0.43	-1.3
6,202,732	-		PFLU_RS27865	0.43	-3.0
6,202,732	-		PFLU_RS27865	0.43	-0.9
6,202,821	+		PFLU_RS27865	0.50	-1.5
6,202,822	-		PFLU_RS27865	0.50	+0.1