Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07005

Experiment: RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
1,470,372	+				+0.0
1,470,377	+				-1.5
1,470,380	-				-1.0
1,470,382	+				-2.3
1,470,382	+				-1.8
1,470,382	+				-0.3
1,470,382	+				+0.4
1,470,401	+				+0.2
1,470,416	+				+1.5
1,470,424	-				-0.6
1,470,429	+				-0.2
1,470,476	+		BWI76_RS07000	0.15	+1.6
1,470,476	+		BWI76_RS07000	0.15	-2.0
1,470,476	+		BWI76_RS07000	0.15	-0.1
1,470,484	-		BWI76_RS07000	0.16	-0.9
1,470,487	+		BWI76_RS07000	0.16	-0.6
1,470,490	-		BWI76_RS07000	0.16	+0.0
1,470,490	-		BWI76_RS07000	0.16	-2.0
1,470,499	+		BWI76_RS07000	0.18	-1.6
1,470,541	+		BWI76_RS07000	0.22	-0.1
1,470,541	+		BWI76_RS07000	0.22	-3.3
1,470,549	-		BWI76_RS07000	0.23	+0.2
1,470,570	+		BWI76_RS07000	0.26	-1.5
1,470,578	-		BWI76_RS07000	0.27	+0.3
1,470,591	+		BWI76_RS07000	0.28	-0.8
1,470,594	-		BWI76_RS07000	0.28	+0.3
1,470,612	+		BWI76_RS07000	0.30	+1.8
1,470,630	-		BWI76_RS07000	0.32	-0.5
1,470,723	+		BWI76_RS07000	0.43	-3.0
1,470,773	-		BWI76_RS07000	0.49	-2.7
1,470,780	+		BWI76_RS07000	0.49	-0.6
1,470,788	+		BWI76_RS07000	0.50	+1.2
1,470,788	-		BWI76_RS07000	0.50	-1.3
1,470,837	+		BWI76_RS07000	0.56	+0.0
1,470,837	+		BWI76_RS07000	0.56	+0.0
1,470,837	+		BWI76_RS07000	0.56	-1.8
1,470,837	+		BWI76_RS07000	0.56	+0.3
1,470,837	+		BWI76_RS07000	0.56	-0.3
1,470,837	+		BWI76_RS07000	0.56	-0.3
1,470,837	+		BWI76_RS07000	0.56	-1.3
1,470,837	+		BWI76_RS07000	0.56	-2.7
1,470,837	+		BWI76_RS07000	0.56	+1.0
1,470,837	+		BWI76_RS07000	0.56	-1.3
1,470,837	+		BWI76_RS07000	0.56	+0.0
1,470,844	+		BWI76_RS07000	0.57	+0.1
1,470,845	-		BWI76_RS07000	0.57	+2.0
1,470,845	-		BWI76_RS07000	0.57	-2.0
1,470,845	-		BWI76_RS07000	0.57	-1.3
1,470,845	-		BWI76_RS07000	0.57	-1.3
1,470,845	-		BWI76_RS07000	0.57	-0.3
1,470,845	-		BWI76_RS07000	0.57	-0.4
1,470,845	-		BWI76_RS07000	0.57	-0.6
1,470,845	-		BWI76_RS07000	0.57	-1.1
1,470,852	-		BWI76_RS07000	0.58	-1.6
1,470,852	-		BWI76_RS07000	0.58	+0.5
1,470,871	-		BWI76_RS07000	0.60	+0.6
1,470,914	+		BWI76_RS07000	0.65	+0.2
1,470,920	+		BWI76_RS07000	0.65	+2.0
1,470,920	+		BWI76_RS07000	0.65	-2.3
1,470,928	-		BWI76_RS07000	0.66	-1.0
1,470,935	-		BWI76_RS07000	0.67	-1.6
1,470,950	+		BWI76_RS07000	0.69	-1.8
1,470,951	+		BWI76_RS07000	0.69	-0.6
1,471,026	-		BWI76_RS07000	0.77	+1.6
1,471,054	-		BWI76_RS07000	0.81	+0.6
1,471,056	+		BWI76_RS07000	0.81	-0.5
1,471,068	+		BWI76_RS07000	0.82	-0.6
1,471,076	+		BWI76_RS07000	0.83	-2.8
1,471,094	-		BWI76_RS07000	0.85	+2.6
1,471,094	-		BWI76_RS07000	0.85	-0.8
1,471,095	-		BWI76_RS07000	0.85	-1.0
1,471,120	+		BWI76_RS07000	0.88	-0.3
1,471,120	+		BWI76_RS07000	0.88	-2.2
1,471,120	+		BWI76_RS07000	0.88	-2.3
1,471,127	-		BWI76_RS07000	0.89	+1.0
1,471,130	+		BWI76_RS07000	0.89	-2.9
1,471,253	+				-0.6
1,471,334	+				-2.0
1,471,334	+				-0.3
1,471,334	+				-2.0
1,471,334	+				+1.0
1,471,334	+				+0.1
1,471,334	+				+0.9
1,471,334	+				-2.8
1,471,334	+				+0.8
1,471,334	+				+0.1
1,471,334	+				+1.7
1,471,334	+				-2.8
1,471,334	+				+0.7
1,471,334	+				+0.0
1,471,334	+				-0.8
1,471,334	+				-1.2
1,471,342	-				+0.2
1,471,352	-				-3.7
1,471,403	+		BWI76_RS07005	0.10	+1.0
1,471,403	+		BWI76_RS07005	0.10	+0.9
1,471,403	+		BWI76_RS07005	0.10	-1.0
1,471,403	+		BWI76_RS07005	0.10	-0.4
1,471,403	+		BWI76_RS07005	0.10	-0.7
1,471,403	+		BWI76_RS07005	0.10	-1.6
1,471,403	+		BWI76_RS07005	0.10	-0.1
1,471,403	+		BWI76_RS07005	0.10	-1.8
1,471,403	+		BWI76_RS07005	0.10	+0.7
1,471,403	+		BWI76_RS07005	0.10	-2.5
1,471,403	+		BWI76_RS07005	0.10	-0.3
1,471,403	+		BWI76_RS07005	0.10	+0.0
1,471,403	+		BWI76_RS07005	0.10	+0.7
1,471,403	+		BWI76_RS07005	0.10	-1.6
1,471,403	+		BWI76_RS07005	0.10	+0.3
1,471,403	+		BWI76_RS07005	0.10	-0.6
1,471,403	+		BWI76_RS07005	0.10	+0.3
1,471,403	+		BWI76_RS07005	0.10	+0.3
1,471,403	+		BWI76_RS07005	0.10	-0.6
1,471,403	+				+1.0
1,471,403	+		BWI76_RS07005	0.10	+0.9
1,471,403	+		BWI76_RS07005	0.10	-2.0
1,471,403	+		BWI76_RS07005	0.10	-3.3
1,471,403	+		BWI76_RS07005	0.10	-1.0
1,471,403	+		BWI76_RS07005	0.10	+0.6
1,471,403	+		BWI76_RS07005	0.10	-1.1
1,471,403	+		BWI76_RS07005	0.10	-3.2
1,471,403	+		BWI76_RS07005	0.10	-1.6
1,471,403	+		BWI76_RS07005	0.10	-0.3
1,471,411	-		BWI76_RS07005	0.11	-0.2
1,471,411	-		BWI76_RS07005	0.11	-1.2
1,471,414	+		BWI76_RS07005	0.11	-0.5
1,471,414	+		BWI76_RS07005	0.11	-1.2
1,471,423	+		BWI76_RS07005	0.12	+0.5
1,471,464	+		BWI76_RS07005	0.15	-2.0
1,471,472	+		BWI76_RS07005	0.16	-0.7
1,471,472	+		BWI76_RS07005	0.16	-1.0
1,471,480	+		BWI76_RS07005	0.16	-1.0
1,471,488	+		BWI76_RS07005	0.17	-2.3
1,471,488	+		BWI76_RS07005	0.17	-1.6
1,471,488	+		BWI76_RS07005	0.17	-2.5
1,471,525	+		BWI76_RS07005	0.20	-0.6
1,471,556	+		BWI76_RS07005	0.22	+0.7
1,471,581	+		BWI76_RS07005	0.24	-2.0
1,471,591	+		BWI76_RS07005	0.25	-1.2
1,471,591	+		BWI76_RS07005	0.25	+0.9
1,471,591	+		BWI76_RS07005	0.25	-3.0
1,471,591	+		BWI76_RS07005	0.25	+0.0
1,471,599	-		BWI76_RS07005	0.26	+1.5
1,471,602	+		BWI76_RS07005	0.26	+0.3
1,471,607	+		BWI76_RS07005	0.26	-1.0
1,471,616	+		BWI76_RS07005	0.27	-0.5
1,471,620	-		BWI76_RS07005	0.27	-0.6
1,471,631	+		BWI76_RS07005	0.28	-3.0
1,471,666	-		BWI76_RS07005	0.31	+0.0
1,471,703	+		BWI76_RS07005	0.34	+0.4
1,471,734	+		BWI76_RS07005	0.36	+0.3
1,471,734	+		BWI76_RS07005	0.36	-2.0
1,471,739	+		BWI76_RS07005	0.37	-1.2
1,471,739	+		BWI76_RS07005	0.37	+1.0
1,471,739	+		BWI76_RS07005	0.37	-4.0
1,471,747	-		BWI76_RS07005	0.37	+0.3
1,471,828	+		BWI76_RS07005	0.44	-1.3
1,471,831	-		BWI76_RS07005	0.44	-2.0
1,471,860	+		BWI76_RS07005	0.46	-1.0
1,471,860	+		BWI76_RS07005	0.46	-2.2
1,471,939	+		BWI76_RS07005	0.53	+0.1
1,471,959	+		BWI76_RS07005	0.54	-2.2
1,472,137	-		BWI76_RS07005	0.69	+0.4
1,472,189	+		BWI76_RS07005	0.73	-0.3
1,472,192	-		BWI76_RS07005	0.73	-0.7
1,472,207	-		BWI76_RS07005	0.74	+0.2
1,472,207	-		BWI76_RS07005	0.74	-2.1
1,472,220	+		BWI76_RS07005	0.75	-0.3
1,472,223	-		BWI76_RS07005	0.75	+1.0
1,472,228	-		BWI76_RS07005	0.76	-2.3
1,472,238	+		BWI76_RS07005	0.77	+0.1
1,472,238	+		BWI76_RS07005	0.77	-0.2
1,472,238	+		BWI76_RS07005	0.77	+0.5
1,472,238	+		BWI76_RS07005	0.77	+0.7
1,472,240	-		BWI76_RS07005	0.77	-2.5
1,472,241	-		BWI76_RS07005	0.77	-1.6
1,472,241	-		BWI76_RS07005	0.77	+0.5
1,472,243	+		BWI76_RS07005	0.77	+1.7
1,472,246	-		BWI76_RS07005	0.77	-2.6
1,472,246	-		BWI76_RS07005	0.77	+1.0
1,472,246	-		BWI76_RS07005	0.77	-0.6
1,472,248	+		BWI76_RS07005	0.77	-1.5
1,472,248	+		BWI76_RS07005	0.77	+0.0
1,472,248	+		BWI76_RS07005	0.77	-2.3
1,472,255	+		BWI76_RS07005	0.78	-0.7
1,472,256	-		BWI76_RS07005	0.78	-0.9
1,472,256	-		BWI76_RS07005	0.78	+0.9
1,472,256	-		BWI76_RS07005	0.78	+0.7
1,472,256	-		BWI76_RS07005	0.78	-2.6
1,472,256	-		BWI76_RS07005	0.78	-0.6
1,472,279	-		BWI76_RS07005	0.80	+2.6
1,472,316	-		BWI76_RS07005	0.83	+0.1
1,472,321	+		BWI76_RS07005	0.83	-1.6
1,472,321	+				+1.1
1,472,329	-		BWI76_RS07005	0.84	-2.5
1,472,329	-		BWI76_RS07005	0.84	-0.2
1,472,364	+		BWI76_RS07005	0.87	-2.7
1,472,364	+		BWI76_RS07005	0.87	-0.6
1,472,365	-		BWI76_RS07005	0.87	-2.2
1,472,370	-		BWI76_RS07005	0.87	-0.6
1,472,372	-				+1.0
1,472,372	-		BWI76_RS07005	0.87	-0.6
1,472,386	-		BWI76_RS07005	0.88	+1.0
1,472,405	+				+1.3
1,472,456	-				-0.3
1,472,460	-				-1.0
1,472,471	-				-3.3
1,472,472	+				+1.0
1,472,473	-				-1.3
1,472,505	-				-0.2
1,472,517	-				+1.0
1,472,517	-				+1.0
1,472,568	+				-0.6
1,472,568	+				+0.0
1,472,568	+				-1.4
1,472,569	+				-1.6
1,472,575	+				-2.3
1,472,576	-				+1.8
1,472,621	+				-2.5
1,472,632	+				+1.1
1,472,638	+				+0.0
1,472,645	-				+0.6
1,472,719	+				-0.6
1,472,793	+		BWI76_RS07010	0.12	-0.3
1,472,793	+		BWI76_RS07010	0.12	-1.6
1,472,801	-		BWI76_RS07010	0.13	-1.0
1,472,837	+		BWI76_RS07010	0.15	+2.0
1,472,837	+		BWI76_RS07010	0.15	-3.6
1,472,843	+		BWI76_RS07010	0.16	-2.9
1,472,845	+		BWI76_RS07010	0.16	-1.0
1,472,845	-		BWI76_RS07010	0.16	-2.2
1,472,845	-		BWI76_RS07010	0.16	-1.7
1,472,853	-		BWI76_RS07010	0.17	+0.4
1,472,853	-		BWI76_RS07010	0.17	-0.3
1,472,853	-		BWI76_RS07010	0.17	-2.3
1,472,873	+		BWI76_RS07010	0.18	+0.6
1,472,873	+		BWI76_RS07010	0.18	-0.5
1,472,881	-		BWI76_RS07010	0.18	-0.7
1,472,902	+		BWI76_RS07010	0.20	-1.3
1,472,904	+		BWI76_RS07010	0.20	-0.3
1,472,904	+		BWI76_RS07010	0.20	+0.5
1,472,904	+		BWI76_RS07010	0.20	-2.3
1,472,904	+		BWI76_RS07010	0.20	-1.9
1,472,904	+		BWI76_RS07010	0.20	-2.8
1,472,904	+		BWI76_RS07010	0.20	-0.1
1,472,904	+		BWI76_RS07010	0.20	-0.2
1,472,904	+		BWI76_RS07010	0.20	-2.9
1,472,904	+		BWI76_RS07010	0.20	+1.5
1,472,904	+		BWI76_RS07010	0.20	-1.3
1,472,904	+		BWI76_RS07010	0.20	+1.0
1,472,912	-		BWI76_RS07010	0.21	-0.6
1,472,912	-		BWI76_RS07010	0.21	-2.6
1,472,912	-				-0.8
1,472,912	-		BWI76_RS07010	0.21	+3.6
1,472,912	-		BWI76_RS07010	0.21	+1.0
1,472,912	-		BWI76_RS07010	0.21	-1.2
1,472,912	-		BWI76_RS07010	0.21	-1.0
1,472,912	-		BWI76_RS07010	0.21	-1.6
1,472,924	+		BWI76_RS07010	0.21	-1.3
1,472,924	+		BWI76_RS07010	0.21	-1.6
1,472,928	+		BWI76_RS07010	0.22	+1.0
1,472,928	+		BWI76_RS07010	0.22	+2.6
1,472,928	+		BWI76_RS07010	0.22	+2.1
1,472,933	+		BWI76_RS07010	0.22	+1.0
1,472,933	+		BWI76_RS07010	0.22	-1.4
1,472,938	+		BWI76_RS07010	0.22	-1.1
1,472,938	+		BWI76_RS07010	0.22	+0.0
1,472,938	+		BWI76_RS07010	0.22	+1.0
1,472,938	+		BWI76_RS07010	0.22	-0.6
1,472,938	+		BWI76_RS07010	0.22	-1.0
1,472,938	+		BWI76_RS07010	0.22	-2.0
1,472,938	+		BWI76_RS07010	0.22	-0.6
1,472,938	+		BWI76_RS07010	0.22	-1.6
1,472,938	+		BWI76_RS07010	0.22	-0.6
1,472,938	+		BWI76_RS07010	0.22	-3.0
1,472,938	+		BWI76_RS07010	0.22	-0.3
1,472,938	+		BWI76_RS07010	0.22	-0.6
1,472,938	+		BWI76_RS07010	0.22	-1.3
1,472,938	+		BWI76_RS07010	0.22	+2.3
1,472,938	+		BWI76_RS07010	0.22	+1.2
1,472,938	+		BWI76_RS07010	0.22	-2.6
1,472,938	+		BWI76_RS07010	0.22	+2.8
1,472,938	+		BWI76_RS07010	0.22	-1.6
1,472,938	+		BWI76_RS07010	0.22	-2.3
1,472,938	+		BWI76_RS07010	0.22	-0.1
1,472,938	+		BWI76_RS07010	0.22	-0.6
1,472,938	+		BWI76_RS07010	0.22	-2.0
1,472,941	-		BWI76_RS07010	0.23	+0.0
1,472,946	-		BWI76_RS07010	0.23	+0.2
1,472,946	-		BWI76_RS07010	0.23	-0.2
1,472,946	-		BWI76_RS07010	0.23	-1.3
1,472,946	-		BWI76_RS07010	0.23	-1.3
1,472,946	-		BWI76_RS07010	0.23	-1.6
1,472,949	+		BWI76_RS07010	0.23	+0.7
1,472,949	+		BWI76_RS07010	0.23	-0.2
1,472,957	-		BWI76_RS07010	0.24	+1.0
1,472,975	+		BWI76_RS07010	0.25	-0.9
1,472,980	+		BWI76_RS07010	0.25	-1.8
1,472,980	-		BWI76_RS07010	0.25	-1.3
1,472,982	+		BWI76_RS07010	0.25	-0.3
1,472,988	-				-1.3
1,472,993	-		BWI76_RS07010	0.26	+0.0
1,473,002	+		BWI76_RS07010	0.27	-2.3
1,473,017	+		BWI76_RS07010	0.28	+0.0
1,473,054	+		BWI76_RS07010	0.30	-0.2
1,473,068	+		BWI76_RS07010	0.31	-0.2
1,473,073	+		BWI76_RS07010	0.32	-0.4
1,473,073	+		BWI76_RS07010	0.32	-2.8
1,473,073	+		BWI76_RS07010	0.32	-1.1
1,473,081	-		BWI76_RS07010	0.32	-2.7
1,473,081	-		BWI76_RS07010	0.32	-0.6
1,473,101	-		BWI76_RS07010	0.34	-1.3
1,473,177	-		BWI76_RS07010	0.39	-3.6
1,473,177	-		BWI76_RS07010	0.39	+1.0
1,473,183	+		BWI76_RS07010	0.39	-2.4
1,473,183	+		BWI76_RS07010	0.39	-1.2
1,473,216	-		BWI76_RS07010	0.42	-3.5
1,473,231	+		BWI76_RS07010	0.43	-0.4
1,473,231	+		BWI76_RS07010	0.43	+2.0
1,473,234	-		BWI76_RS07010	0.43	+1.2
1,473,239	-		BWI76_RS07010	0.43	-0.0
1,473,239	-		BWI76_RS07010	0.43	-2.5
1,473,242	+		BWI76_RS07010	0.43	-3.3
1,473,249	+		BWI76_RS07010	0.44	+0.3
1,473,250	-		BWI76_RS07010	0.44	-2.5
1,473,341	+		BWI76_RS07010	0.50	-0.2
1,473,376	+		BWI76_RS07010	0.53	-2.3
1,473,387	+		BWI76_RS07010	0.53	+0.6
1,473,398	+		BWI76_RS07010	0.54	-2.3
1,473,405	+		BWI76_RS07010	0.55	-1.8
1,473,405	+		BWI76_RS07010	0.55	-1.3
1,473,405	+		BWI76_RS07010	0.55	-2.0
1,473,407	-		BWI76_RS07010	0.55	-0.9
1,473,413	-		BWI76_RS07010	0.55	-1.2
1,473,442	+		BWI76_RS07010	0.57	-1.8
1,473,442	+		BWI76_RS07010	0.57	-1.3
1,473,443	+		BWI76_RS07010	0.57	+0.2
1,473,473	-		BWI76_RS07010	0.59	-1.8
1,473,492	+		BWI76_RS07010	0.60	+2.4
1,473,500	+		BWI76_RS07010	0.61	-0.8
1,473,500	-		BWI76_RS07010	0.61	-2.5
1,473,500	-		BWI76_RS07010	0.61	+0.5
1,473,508	-		BWI76_RS07010	0.62	-0.6
1,473,517	+		BWI76_RS07010	0.62	-2.7
1,473,526	-		BWI76_RS07010	0.63	-1.8
1,473,526	-		BWI76_RS07010	0.63	+0.0