Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15515

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
3,249,084	-				-2.1
3,249,084	-				-0.8
3,249,084	-				+0.0
3,249,108	+				+0.3
3,249,110	-				+0.4
3,249,131	+		BWI76_RS15505	0.16	-0.7
3,249,133	-		BWI76_RS15505	0.16	-0.9
3,249,139	-		BWI76_RS15505	0.18	-0.8
3,249,139	-		BWI76_RS15505	0.18	-1.4
3,249,139	-		BWI76_RS15505	0.18	+0.3
3,249,141	-		BWI76_RS15505	0.19	-1.1
3,249,141	-		BWI76_RS15505	0.19	-0.8
3,249,149	-		BWI76_RS15505	0.21	-0.9
3,249,149	-		BWI76_RS15505	0.21	-0.8
3,249,164	+		BWI76_RS15505	0.26	-1.4
3,249,172	+		BWI76_RS15505	0.28	+0.6
3,249,172	-		BWI76_RS15505	0.28	-0.5
3,249,241	+				-1.4
3,249,249	-		BWI76_RS15505	0.52	-0.8
3,249,288	+		BWI76_RS15505	0.63	-0.7
3,249,315	+				+0.9
3,249,342	-		BWI76_RS15505	0.80	+0.2
3,249,351	+		BWI76_RS15505	0.82	+0.5
3,249,351	+		BWI76_RS15505	0.82	+0.9
3,249,358	+		BWI76_RS15505	0.85	-1.9
3,249,368	+		BWI76_RS15505	0.88	-0.6
3,249,371	-		BWI76_RS15505	0.88	-3.8
3,249,502	-		BWI76_RS15510	0.39	-0.9
3,249,583	-		BWI76_RS15510	0.73	-1.7
3,249,835	+				+0.3
3,249,843	-				-0.7
3,249,843	-				-0.1
3,249,843	-				-3.7
3,249,843	-				-2.4
3,249,848	-				+2.2
3,249,849	+				-1.2
3,249,853	-				-0.1
3,250,021	+				-1.1
3,250,084	+				-2.3
3,250,092	-				-1.6
3,250,092	-				-0.2
3,250,094	-				-0.1
3,250,109	-				+0.4
3,250,193	-		BWI76_RS15515	0.17	-0.4
3,250,275	+		BWI76_RS15515	0.28	-1.0
3,250,278	-		BWI76_RS15515	0.29	+0.9
3,250,301	-		BWI76_RS15515	0.32	-2.3
3,250,348	-		BWI76_RS15515	0.39	-3.3
3,250,378	+		BWI76_RS15515	0.43	-1.0
3,250,386	-		BWI76_RS15515	0.44	-4.0
3,250,400	-		BWI76_RS15515	0.47	-2.9
3,250,400	-		BWI76_RS15515	0.47	-1.0
3,250,465	+		BWI76_RS15515	0.56	-3.3
3,250,465	+		BWI76_RS15515	0.56	+0.7
3,250,468	-		BWI76_RS15515	0.56	-4.4
3,250,482	+		BWI76_RS15515	0.58	-0.7
3,250,490	-		BWI76_RS15515	0.60	-1.9
3,250,490	-		BWI76_RS15515	0.60	-0.9
3,250,490	-		BWI76_RS15515	0.60	-1.0
3,250,490	-		BWI76_RS15515	0.60	-0.5
3,250,538	-		BWI76_RS15515	0.67	-2.3
3,250,548	-		BWI76_RS15515	0.68	-1.0
3,250,548	-		BWI76_RS15515	0.68	-2.4
3,250,587	+		BWI76_RS15515	0.74	-3.8
3,250,587	-		BWI76_RS15515	0.74	-2.7
3,250,594	-		BWI76_RS15515	0.75	-1.0
3,250,596	+		BWI76_RS15515	0.75	-1.6
3,250,604	-		BWI76_RS15515	0.76	-0.9
3,250,606	+		BWI76_RS15515	0.76	-0.6
3,250,616	-		BWI76_RS15515	0.78	-1.1
3,250,695	-		BWI76_RS15515	0.89	-1.7
3,250,708	+				-1.3
3,250,747	-				-0.1
3,250,764	-				-0.5
3,250,768	+				-0.3
3,250,776	-				-1.0
3,250,818	-				+0.5
3,250,818	-				-0.3
3,250,818	-				-2.1
3,250,820	-				-0.7
3,250,860	+				-3.5
3,250,972	-		BWI76_RS15520	0.11	-1.3
3,250,972	-		BWI76_RS15520	0.11	+0.0
3,251,035	-		BWI76_RS15520	0.14	-0.5
3,251,038	+		BWI76_RS15520	0.15	-2.3
3,251,045	+		BWI76_RS15520	0.15	-1.7
3,251,060	-		BWI76_RS15520	0.16	-1.1
3,251,066	+		BWI76_RS15520	0.16	+0.9
3,251,074	-		BWI76_RS15520	0.16	+0.9
3,251,075	+		BWI76_RS15520	0.17	+2.5
3,251,075	-		BWI76_RS15520	0.17	-3.0
3,251,087	-		BWI76_RS15520	0.17	-1.8
3,251,087	-		BWI76_RS15520	0.17	-3.1
3,251,106	-		BWI76_RS15520	0.18	+0.9
3,251,116	-		BWI76_RS15520	0.19	-1.7
3,251,207	-		BWI76_RS15520	0.24	-3.2
3,251,253	-		BWI76_RS15520	0.26	-3.3
3,251,285	-		BWI76_RS15520	0.28	-4.1
3,251,299	+		BWI76_RS15520	0.29	-1.9
3,251,299	-		BWI76_RS15520	0.29	-0.5
3,251,299	-		BWI76_RS15520	0.29	+0.9
3,251,307	-		BWI76_RS15520	0.29	-1.7
3,251,307	-		BWI76_RS15520	0.29	-1.7
3,251,307	-		BWI76_RS15520	0.29	-0.1
3,251,307	-		BWI76_RS15520	0.29	-0.7
3,251,329	-				-3.5
3,251,329	-		BWI76_RS15520	0.30	-2.6
3,251,330	-		BWI76_RS15520	0.30	-0.8
3,251,352	-		BWI76_RS15520	0.31	-3.1
3,251,354	+		BWI76_RS15520	0.32	-1.9
3,251,362	-		BWI76_RS15520	0.32	-1.2
3,251,376	+		BWI76_RS15520	0.33	-0.1
3,251,383	-		BWI76_RS15520	0.33	-1.7
3,251,383	-		BWI76_RS15520	0.33	-1.4
3,251,567	-		BWI76_RS15520	0.43	+0.4
3,251,576	+		BWI76_RS15520	0.44	-2.6
3,251,579	-		BWI76_RS15520	0.44	-1.3
3,251,579	-		BWI76_RS15520	0.44	-1.3
3,251,584	-		BWI76_RS15520	0.44	-3.1
3,251,589	-		BWI76_RS15520	0.44	-1.5
3,251,595	+		BWI76_RS15520	0.45	+1.3
3,251,599	-		BWI76_RS15520	0.45	-0.6
3,251,660	+		BWI76_RS15520	0.48	-0.6
3,251,660	+		BWI76_RS15520	0.48	-1.0
3,251,668	+		BWI76_RS15520	0.49	+0.6
3,251,668	-		BWI76_RS15520	0.49	-0.5
3,251,676	-		BWI76_RS15520	0.49	+0.9
3,251,676	-		BWI76_RS15520	0.49	+0.0
3,251,681	-		BWI76_RS15520	0.49	-3.3
3,251,681	-		BWI76_RS15520	0.49	-1.7
3,251,699	+		BWI76_RS15520	0.50	-1.1
3,251,712	-		BWI76_RS15520	0.51	-1.3
3,251,737	+		BWI76_RS15520	0.52	-1.7
3,251,745	-		BWI76_RS15520	0.53	-1.0