Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12525

Experiment: RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,614,625	-		BWI76_RS12515	0.58	-0.6
2,614,653	+		BWI76_RS12515	0.63	-0.5
2,614,889	+				-0.1
2,614,901	-				+0.6
2,614,901	-				-1.6
2,614,963	+				+0.0
2,615,139	+		BWI76_RS12520	0.11	+0.7
2,615,227	+		BWI76_RS12520	0.54	+0.8
2,615,232	+		BWI76_RS12520	0.56	+1.0
2,615,232	-		BWI76_RS12520	0.56	-1.3
2,615,304	+				-0.4
2,615,312	-				+0.4
2,615,412	-				-2.0
2,615,485	+				+0.0
2,615,493	-				+0.2
2,615,604	-				+0.3
2,615,619	-				-3.2
2,615,630	-				-0.4
2,615,680	-		BWI76_RS12525	0.11	-0.3
2,615,753	-		BWI76_RS12525	0.15	+0.5
2,615,773	-		BWI76_RS12525	0.16	-0.6
2,615,811	-		BWI76_RS12525	0.19	+0.2
2,615,862	+		BWI76_RS12525	0.22	-1.0
2,615,865	-		BWI76_RS12525	0.22	+0.0
2,615,963	+		BWI76_RS12525	0.28	-1.3
2,615,972	-		BWI76_RS12525	0.28	-0.1
2,616,039	+		BWI76_RS12525	0.32	+0.3
2,616,090	+		BWI76_RS12525	0.35	-1.6
2,616,130	+		BWI76_RS12525	0.38	-1.8
2,616,166	-		BWI76_RS12525	0.40	-0.7
2,616,177	+		BWI76_RS12525	0.40	-0.6
2,616,177	+		BWI76_RS12525	0.40	+1.7
2,616,259	-		BWI76_RS12525	0.45	+0.4
2,616,323	-		BWI76_RS12525	0.49	-1.6
2,616,343	-		BWI76_RS12525	0.50	+1.0
2,616,353	-		BWI76_RS12525	0.51	+1.0
2,616,384	-		BWI76_RS12525	0.53	-1.0
2,616,475	-		BWI76_RS12525	0.58	+1.3
2,616,514	+		BWI76_RS12525	0.61	-1.0
2,616,523	-		BWI76_RS12525	0.61	-3.3
2,616,619	-		BWI76_RS12525	0.67	-0.8
2,616,702	-		BWI76_RS12525	0.72	+0.5
2,616,744	-		BWI76_RS12525	0.74	-2.1
2,616,776	-		BWI76_RS12525	0.76	-0.1
2,616,793	+		BWI76_RS12525	0.77	-0.5
2,616,801	-		BWI76_RS12525	0.78	-1.7
2,616,806	+		BWI76_RS12525	0.78	+1.3
2,616,814	-		BWI76_RS12525	0.78	-0.2
2,616,907	+		BWI76_RS12525	0.84	-1.7
2,616,907	+		BWI76_RS12525	0.84	-0.1
2,616,915	-		BWI76_RS12525	0.84	-2.7
2,616,916	-		BWI76_RS12525	0.84	-2.1
2,616,933	+		BWI76_RS12525	0.85	-0.6
2,616,961	-		BWI76_RS12525	0.87	+0.2
2,617,067	+				+2.6
2,617,075	-				+1.0
2,617,187	-				-1.3
2,617,187	-				+1.1
2,617,239	+				+1.4
2,617,261	+				-0.6
2,617,300	-				+0.3
2,617,325	-				-0.3
2,617,337	+				-3.3
2,617,547	-		BWI76_RS12530	0.22	-0.4
2,617,565	-		BWI76_RS12530	0.23	+0.0
2,617,566	-		BWI76_RS12530	0.23	+1.0
2,617,590	+				+0.0
2,617,590	+		BWI76_RS12530	0.24	-1.0
2,617,598	-		BWI76_RS12530	0.25	-0.2
2,617,598	-		BWI76_RS12530	0.25	-1.4
2,617,631	-		BWI76_RS12530	0.27	-1.6
2,617,638	-		BWI76_RS12530	0.28	+1.0
2,617,649	-		BWI76_RS12530	0.29	-0.4
2,617,787	+		BWI76_RS12530	0.38	-0.0
2,617,787	+		BWI76_RS12530	0.38	-0.9
2,617,800	-		BWI76_RS12530	0.39	-0.1
2,617,815	-		BWI76_RS12530	0.40	+1.1
2,617,831	+		BWI76_RS12530	0.41	-0.0
2,617,839	-				+1.0
2,617,889	+		BWI76_RS12530	0.45	-1.1
2,617,937	+		BWI76_RS12530	0.48	-1.3
2,617,956	+		BWI76_RS12530	0.50	+0.4
2,617,964	-		BWI76_RS12530	0.50	-1.3
2,617,964	-		BWI76_RS12530	0.50	-0.8
2,617,997	-		BWI76_RS12530	0.52	+0.2
2,618,015	+		BWI76_RS12530	0.54	-1.8
2,618,118	+		BWI76_RS12530	0.61	-0.4
2,618,126	-		BWI76_RS12530	0.61	-3.7
2,618,126	-		BWI76_RS12530	0.61	+0.2
2,618,169	+		BWI76_RS12530	0.64	-2.4
2,618,169	+		BWI76_RS12530	0.64	-0.5
2,618,169	+		BWI76_RS12530	0.64	+0.4
2,618,169	+		BWI76_RS12530	0.64	+0.6