Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29300

Experiment: Glucose (C) and Betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS
6,506,747	+		PFLU_RS29290	0.50	-0.6
6,506,747	+		PFLU_RS29290	0.50	-0.4
6,506,747	+		PFLU_RS29290	0.50	+1.6
6,506,748	-		PFLU_RS29290	0.51	+0.7
6,506,748	-		PFLU_RS29290	0.51	-1.8
6,506,748	-		PFLU_RS29290	0.51	-1.0
6,506,870	+		PFLU_RS29290	0.88	-0.8
6,506,870	+		PFLU_RS29290	0.88	+0.1
6,506,871	-		PFLU_RS29290	0.88	-0.8
6,506,871	-		PFLU_RS29290	0.88	-0.1
6,506,871	-		PFLU_RS29290	0.88	-0.9
6,506,871	-		PFLU_RS29290	0.88	-1.3
6,506,871	-		PFLU_RS29290	0.88	-0.1
6,506,871	-		PFLU_RS29290	0.88	+0.1
6,506,871	-		PFLU_RS29290	0.88	-0.8
6,506,871	-		PFLU_RS29290	0.88	+0.9
6,506,913	+				-1.7
6,506,913	+				-1.9
6,506,913	+				+1.2
6,506,913	+				+0.0
6,506,913	+				-0.1
6,506,913	+				-0.1
6,506,914	-				-0.2
6,506,914	-				+1.5
6,506,914	-				+1.2
6,506,914	-				-1.6
6,506,914	-				-1.3
6,506,914	-				-1.8
6,506,914	-				-0.5
6,506,914	-				-1.2
6,506,914	-				-1.3
6,506,939	+				+0.1
6,506,939	+				+0.4
6,506,939	+				-0.6
6,506,939	+				+0.6
6,506,939	+				+0.6
6,506,939	+				+0.9
6,506,939	+				-1.1
6,506,939	+				-2.3
6,506,939	+				+1.8
6,506,939	+				-0.7
6,506,939	+				-1.0
6,506,939	+				+0.3
6,506,940	-				+0.4
6,506,940	-				-0.8
6,506,940	-				-0.1
6,506,940	-				-0.5
6,506,940	-				-0.7
6,506,940	-				+0.5
6,506,940	-				+1.4
6,506,940	-				-0.1
6,506,940	-				+0.2
6,506,940	-				+0.1
6,506,940	-				+0.1
6,506,940	-				-2.3
6,506,940	-				+1.3
6,506,940	-				+0.6
6,506,940	-				-0.8
6,506,940	-				-0.9
6,506,940	-				+0.9
6,506,940	-				+1.0
6,506,940	-				-0.4
6,506,940	-				+0.3
6,506,940	-				+1.2
6,506,940	-				+0.7
6,506,943	+				+0.2
6,506,943	+				-1.8
6,506,943	+				-0.3
6,506,943	+				+1.2
6,506,943	+				-0.6
6,506,943	+				+0.9
6,506,943	+				-2.2
6,506,943	+				-0.3
6,506,943	+				+0.6
6,506,943	+				-1.0
6,506,943	+				-0.9
6,506,943	+				+0.7
6,506,943	+				-2.0
6,506,944	-				-0.5
6,506,944	-				-1.0
6,506,944	-				+1.2
6,506,944	-				+1.3
6,506,944	-				-1.8
6,506,944	-				+0.1
6,506,944	-				+1.3
6,506,944	-				+0.9
6,506,945	+				-0.5
6,506,945	+				-0.6
6,506,945	+				-1.9
6,506,945	+				-2.3
6,506,945	+				-0.4
6,506,945	+				-2.5
6,506,946	-				-0.1
6,506,946	-				+0.8
6,506,946	-				-0.6
6,506,946	-				+0.0
6,506,946	-				-1.5
6,506,946	-				+1.4
6,507,013	+				-1.1
6,507,013	+				-1.3
6,507,013	+				-0.4
6,507,013	+				-0.5
6,507,013	+				+1.2
6,507,013	+				-1.2
6,507,013	+				-0.1
6,507,013	+				+0.2
6,507,014	-				+0.8
6,507,014	-				-0.1
6,507,014	-				+0.1
6,507,014	-				-0.6
6,507,014	-				+1.6
6,507,014	-				+0.9
6,507,014	-				-0.4
6,507,014	-				-1.8
6,507,014	-				+0.4
6,507,047	+				-2.0
6,507,047	+				+0.2
6,507,047	+				-1.3
6,507,048	-				+0.4
6,507,048	-				+1.4
6,507,082	+		PFLU_RS29295	0.16	-2.6
6,507,082	+		PFLU_RS29295	0.16	-0.4
6,507,082	+		PFLU_RS29295	0.16	+0.3
6,507,082	+		PFLU_RS29295	0.16	-0.6
6,507,082	+		PFLU_RS29295	0.16	-0.4
6,507,082	+		PFLU_RS29295	0.16	-0.8
6,507,082	+		PFLU_RS29295	0.16	-2.1
6,507,083	-		PFLU_RS29295	0.17	+0.2
6,507,083	-		PFLU_RS29295	0.17	-0.8
6,507,083	-		PFLU_RS29295	0.17	+2.0
6,507,083	-		PFLU_RS29295	0.17	+0.5
6,507,348	+		PFLU_RS29295	0.79	+1.5
6,507,348	+		PFLU_RS29295	0.79	-0.1
6,507,348	+		PFLU_RS29295	0.79	-2.4
6,507,349	-		PFLU_RS29295	0.79	+1.2
6,507,349	-		PFLU_RS29295	0.79	+1.2
6,507,349	-		PFLU_RS29295	0.79	-2.7
6,507,416	+				-1.3
6,507,416	+				-1.1
6,507,416	+				-2.1
6,507,417	-				-1.2
6,507,417	-				+0.5
6,507,417	-				-0.3
6,507,417	-				+0.1
6,507,417	-				-1.1
6,507,417	-				+0.3
6,507,437	+				-2.1
6,507,437	+				-2.0
6,507,437	+				-0.9
6,507,437	+				+1.8
6,507,437	+				+0.2
6,507,437	+				+0.7
6,507,437	+				+0.2
6,507,437	+				-0.1
6,507,437	+				-3.3
6,507,437	+				-0.1
6,507,437	+				-2.4
6,507,437	+				+1.0
6,507,437	+				-1.2
6,507,437	+				-1.2
6,507,437	+				+0.6
6,507,437	+				+0.6
6,507,437	+				-0.5
6,507,437	+				+1.7
6,507,437	+				+0.8
6,507,437	+				+0.0
6,507,437	+				-2.1
6,507,437	+				+2.8
6,507,437	+				-2.5
6,507,437	+				-1.3
6,507,437	+				+0.2
6,507,437	+				+1.0
6,507,438	-				-0.5
6,507,438	-				-0.0
6,507,438	-				+0.3
6,507,438	-				+1.1
6,507,438	-				+1.5
6,507,438	-				-0.5
6,507,438	-				-0.4
6,507,438	-				+0.9
6,507,438	-				+0.6
6,507,438	-				-1.7
6,507,438	-				-0.5
6,507,438	-				+0.0
6,507,438	-				+0.0
6,507,438	-				+0.5
6,507,438	-				+1.0
6,507,438	-				-0.1
6,507,438	-				+1.8
6,507,438	-				-2.0
6,507,438	-				-0.7
6,507,438	-				-0.1
6,507,438	-				+0.6
6,507,438	-				+3.5
6,507,438	-				+0.9
6,507,438	-				+0.6
6,507,438	-				-0.4
6,507,438	-				-0.6
6,507,438	-				-1.3
6,507,438	-				+0.4
6,507,438	-				-1.1
6,507,466	+				-0.7
6,507,467	-				+1.7
6,507,467	-				+0.0
6,507,467	-				+1.4
6,507,498	+				+0.6
6,507,498	+				-0.4
6,507,498	+				+2.8
6,507,499	-				-1.7
6,507,504	+				-0.5
6,507,504	+				-2.3
6,507,504	+				-0.0
6,507,504	+				+0.3
6,507,504	+				+0.8
6,507,504	+				-0.7
6,507,504	+				-1.7
6,507,504	+				+0.5
6,507,504	+				-0.6
6,507,504	+				-1.2
6,507,504	+				-2.6
6,507,504	+				+0.8
6,507,504	+				-0.2
6,507,504	+				-1.3
6,507,504	+				-1.9
6,507,505	-				-1.5
6,507,505	-				-0.6
6,507,505	-				+2.8
6,507,505	-				-0.4
6,507,505	-				+1.2
6,507,505	-				-0.1
6,507,505	-				+0.4
6,507,505	-				-0.7
6,507,505	-				-0.3
6,507,505	-				+0.6
6,507,505	-				-0.3
6,507,505	-				-1.8
6,507,505	-				-0.5
6,507,505	-				+1.4
6,507,505	-				-1.4
6,507,505	-				-0.5
6,507,505	-				+0.9
6,507,505	-				+1.0
6,507,505	-				-2.0
6,507,514	+				-1.8
6,507,514	+				+0.1
6,507,514	+				-1.2
6,507,514	+				+1.0
6,507,515	-				-2.1
6,507,515	-				-0.9
6,507,515	-				+0.6
6,507,577	+				+2.2
6,507,578	-				-0.6
6,507,587	+				-0.9
6,507,587	+				+0.6
6,507,587	+				+0.7
6,507,587	+				-0.3
6,507,587	+				-0.1
6,507,587	+				+1.2
6,507,587	+				+0.1
6,507,588	-				-1.3
6,507,588	-				+1.2
6,507,646	+				-0.3
6,507,646	+				-0.3
6,507,647	-				-1.1
6,507,647	-				-0.3
6,507,647	-				+0.2
6,507,650	+				+0.3
6,507,650	+				-1.5
6,507,650	+				+0.4
6,507,650	+				-0.1
6,507,650	+				-0.3
6,507,650	+				+0.7
6,507,650	+				-2.1
6,507,650	+				-0.6
6,507,650	+				+0.6
6,507,650	+				-0.1
6,507,650	+				-0.6
6,507,650	+				+0.8
6,507,650	+				+0.4
6,507,650	+				-1.1
6,507,650	+				-0.6
6,507,650	+				+0.0
6,507,650	+				-0.2
6,507,650	+				+1.0
6,507,650	+				-0.5
6,507,650	+				-0.6
6,507,650	+				-0.2
6,507,651	-				-1.2
6,507,651	-				-1.4
6,507,651	-				+0.2
6,507,651	-				-1.1
6,507,651	-				+0.3
6,507,651	-				+0.3
6,507,651	-				-1.0
6,507,651	-				+0.7
6,507,651	-				-0.9
6,507,651	-				+1.3
6,507,651	-				-1.4
6,507,651	-				-0.1
6,507,651	-				-1.1
6,507,651	-				-0.5
6,507,651	-				+0.3
6,507,651	-				+0.6
6,507,659	+				-1.7
6,507,659	+				+0.7
6,507,659	+				-0.4
6,507,660	-				+1.2
6,507,660	-				-1.5
6,507,758	+				-1.3
6,507,758	+				+0.1
6,507,758	+				+1.2
6,507,758	+				-0.4
6,507,758	+				-0.9
6,507,758	+				-1.3
6,507,758	+				+3.2
6,507,758	+				-2.2
6,507,758	+				-0.2
6,507,758	+				-0.4
6,507,758	+				+0.5
6,507,758	+				-1.5
6,507,758	+				-1.6
6,507,758	+				-0.6
6,507,758	+				-0.6
6,507,758	+				+0.4
6,507,758	+				-0.4
6,507,758	+				-2.7
6,507,758	+				-1.2
6,507,758	+				-0.7
6,507,758	+				+0.3
6,507,758	+				-1.7
6,507,758	+				-2.5
6,507,758	+				-2.9
6,507,759	-				+0.8
6,507,759	-				-1.1
6,507,759	-				-0.6
6,507,759	-				+1.2
6,507,759	-				-1.0
6,507,759	-				+1.2
6,507,759	-				-1.1
6,507,759	-				-2.1
6,507,759	-				+0.1
6,507,759	-				-1.6
6,507,759	-				-0.2
6,507,759	-				-2.3
6,507,759	-				-1.1
6,507,759	-				-1.1
6,507,759	-				-2.0
6,507,759	-				-1.5
6,507,759	-				+0.4
6,507,759	-				-1.4
6,507,759	-				-0.0
6,507,759	-				-1.9
6,507,759	-				-0.5
6,507,759	-				-1.0
6,507,759	-				-1.7
6,507,776	+				-1.8
6,507,776	+				-1.2
6,507,776	+				-2.1
6,507,776	+				-0.3
6,507,776	+				+1.2
6,507,776	+				-0.1
6,507,776	+				-0.4
6,507,776	+				+1.4
6,507,777	-				-1.6
6,507,777	-				-0.1
6,507,777	-				-2.6
6,507,777	-				-1.4
6,507,777	-				-2.1
6,507,777	-				-0.3
6,507,909	+		PFLU_RS29300	0.19	-0.7
6,507,916	+		PFLU_RS29300	0.20	-0.6
6,507,916	+		PFLU_RS29300	0.20	-2.3
6,507,916	+		PFLU_RS29300	0.20	+0.2
6,507,916	+		PFLU_RS29300	0.20	+1.4
6,507,916	+		PFLU_RS29300	0.20	-1.6
6,507,916	+		PFLU_RS29300	0.20	-1.8
6,507,916	+		PFLU_RS29300	0.20	-0.7
6,507,916	+		PFLU_RS29300	0.20	-0.9
6,507,916	+		PFLU_RS29300	0.20	-0.3
6,507,917	-		PFLU_RS29300	0.20	-2.3
6,507,917	-		PFLU_RS29300	0.20	+0.4
6,507,917	-		PFLU_RS29300	0.20	+0.1
6,507,917	-		PFLU_RS29300	0.20	+0.9
6,507,944	+		PFLU_RS29300	0.22	-1.3
6,507,954	+		PFLU_RS29300	0.23	-0.1
6,507,954	+		PFLU_RS29300	0.23	-0.4
6,507,954	+		PFLU_RS29300	0.23	-1.3
6,507,954	+		PFLU_RS29300	0.23	+0.6
6,507,954	+		PFLU_RS29300	0.23	+0.6
6,507,955	-		PFLU_RS29300	0.23	-0.8
6,507,955	-		PFLU_RS29300	0.23	-0.9
6,507,955	-		PFLU_RS29300	0.23	-1.8
6,507,955	-		PFLU_RS29300	0.23	-0.9
6,507,955	-		PFLU_RS29300	0.23	-2.5
6,507,955	-		PFLU_RS29300	0.23	-1.4
6,507,955	-		PFLU_RS29300	0.23	-1.7
6,507,955	-		PFLU_RS29300	0.23	-1.7
6,507,955	-		PFLU_RS29300	0.23	-1.9
6,507,955	-		PFLU_RS29300	0.23	-1.3
6,508,030	+		PFLU_RS29300	0.28	-0.2
6,508,030	+		PFLU_RS29300	0.28	-1.5
6,508,031	-		PFLU_RS29300	0.28	+0.6
6,508,031	-		PFLU_RS29300	0.28	-1.4
6,508,031	-		PFLU_RS29300	0.28	-1.0
6,508,104	+		PFLU_RS29300	0.34	-0.7
6,508,105	-		PFLU_RS29300	0.34	-1.3
6,508,155	+		PFLU_RS29300	0.38	-1.0
6,508,268	+		PFLU_RS29300	0.46	-1.4
6,508,268	+		PFLU_RS29300	0.46	-0.4
6,508,268	+		PFLU_RS29300	0.46	-0.8
6,508,268	+		PFLU_RS29300	0.46	+0.3
6,508,268	+		PFLU_RS29300	0.46	-2.7
6,508,269	-		PFLU_RS29300	0.46	-1.1
6,508,269	-		PFLU_RS29300	0.46	+0.4
6,508,269	-		PFLU_RS29300	0.46	-0.8
6,508,269	-		PFLU_RS29300	0.46	-3.3
6,508,269	-		PFLU_RS29300	0.46	-1.0
6,508,454	+		PFLU_RS29300	0.60	-1.0
6,508,454	+		PFLU_RS29300	0.60	+0.3
6,508,454	+		PFLU_RS29300	0.60	-0.4
6,508,454	+		PFLU_RS29300	0.60	+0.8
6,508,454	+		PFLU_RS29300	0.60	-1.6
6,508,454	+		PFLU_RS29300	0.60	-2.1
6,508,455	-		PFLU_RS29300	0.60	+1.6
6,508,455	-		PFLU_RS29300	0.60	-0.7
6,508,455	-		PFLU_RS29300	0.60	-1.5
6,508,473	+		PFLU_RS29300	0.61	-0.8
6,508,473	+		PFLU_RS29300	0.61	-0.6
6,508,474	-		PFLU_RS29300	0.62	-2.4
6,508,474	-		PFLU_RS29300	0.62	-1.6
6,508,474	-		PFLU_RS29300	0.62	-1.9
6,508,474	-		PFLU_RS29300	0.62	-1.6
6,508,474	-		PFLU_RS29300	0.62	-1.4
6,508,702	-		PFLU_RS29300	0.79	-3.1
6,508,724	+		PFLU_RS29300	0.80	-1.3
6,508,724	+		PFLU_RS29300	0.80	+0.8
6,508,725	-		PFLU_RS29300	0.80	-2.1
6,508,725	-		PFLU_RS29300	0.80	+0.0
6,508,788	+		PFLU_RS29300	0.85	-0.3
6,508,788	+		PFLU_RS29300	0.85	+0.2
6,508,789	-		PFLU_RS29300	0.85	-1.6
6,508,815	-		PFLU_RS29300	0.87	-1.1
6,508,942	+				+1.2
6,508,943	-				-1.1
6,508,978	-				-2.4
6,508,989	+				+1.0
6,508,989	+				-1.7
6,508,989	+				-1.0
6,508,989	+				+1.2
6,508,990	-				-0.6
6,508,990	-				-1.5
6,508,990	-				-1.5
6,508,990	-				-0.1
6,508,990	-				+0.5
6,509,025	+				-0.6
6,509,025	+				-1.4
6,509,025	+				-2.1
6,509,026	-				+1.4
6,509,026	-				-0.2
6,509,026	-				-0.2
6,509,026	-				-1.4
6,509,054	-				+0.6
6,509,420	+				+0.3
6,509,420	+				+0.2
6,509,421	-				-0.4
6,509,421	-				+0.5
6,509,442	-				+1.0
6,509,442	-				-1.5
6,509,442	-				-1.3
6,509,442	-				-0.5
6,509,442	-				+0.7
6,509,442	-				+0.0
6,509,505	-				+0.8
6,509,571	+				-1.4
6,509,571	+				-0.2
6,509,571	+				+0.6
6,509,627	+				+0.6
6,509,627	+				+0.4
6,509,627	+				+0.4
6,509,627	+				-0.3
6,509,627	+				+0.6
6,509,627	+				-1.2
6,509,627	+				-2.1
6,509,627	+				-0.8
6,509,627	+				-1.3
6,509,627	+				+0.2
6,509,627	+				+0.8
6,509,627	+				-1.2
6,509,628	-				-0.1
6,509,628	-				+0.1
6,509,628	-				-0.7
6,509,628	-				-1.9
6,509,628	-				-0.9
6,509,628	-				+0.7
6,509,731	+				-0.0
6,509,731	+				+0.6
6,509,731	+				+0.4
6,509,731	+				+1.0
6,509,731	+				-0.1
6,509,731	+				-3.6
6,509,732	-				-0.3
6,509,732	-				-0.1
6,509,732	-				-0.4
6,509,732	-				+0.4
6,509,733	+				-1.3
6,509,733	+				+0.8
6,509,733	+				-1.1
6,509,733	+				-0.6
6,509,733	+				+0.1
6,509,733	+				+0.9
6,509,733	+				+0.8
6,509,733	+				+0.6
6,509,733	+				+1.7
6,509,733	+				+0.1
6,509,733	+				+0.7
6,509,733	+				-0.1
6,509,733	+				-0.1
6,509,733	+				-0.6
6,509,733	+				-0.8
6,509,734	-				+0.7
6,509,734	-				+1.2
6,509,734	-				-0.6
6,509,734	-				+1.0
6,509,734	-				+1.0
6,509,734	-				-0.5
6,509,734	-				-2.0
6,509,734	-				+0.0
6,509,734	-				+0.2
6,509,734	-				-0.4
6,509,734	-				+0.4
6,509,734	-				+0.6
6,509,747	+				+1.2
6,509,747	+				-1.4
6,509,747	+				-0.9
6,509,747	+				+0.9
6,509,747	+				+1.4
6,509,747	+				+2.9
6,509,747	+				+1.2
6,509,747	+				-1.0
6,509,747	+				+0.2
6,509,747	+				+0.2
6,509,747	+				-1.0
6,509,748	-				+1.8
6,509,748	-				-1.6
6,509,748	-				-0.9
6,509,748	-				-0.6
6,509,748	-				+1.0
6,509,748	-				-2.5
6,509,748	-				-0.5
6,509,748	-				+0.2
6,509,748	-				+0.1
6,509,748	-				-0.7
6,509,776	-				-1.1
6,509,776	-				-0.5