Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27885

Experiment: Glucose (C) and Betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS
6,208,017	+		PFLU_RS27880	0.83	-0.4
6,208,068	+		PFLU_RS27880	0.85	-2.3
6,208,103	+		PFLU_RS27880	0.87	-1.0
6,208,170	+				+0.0
6,208,170	+				-1.3
6,208,170	+				-2.1
6,208,170	+				-2.7
6,208,170	+				-1.9
6,208,170	+				-1.3
6,208,170	+				-1.9
6,208,170	+				-2.2
6,208,170	+				-1.9
6,208,170	+				-2.4
6,208,170	+				+0.3
6,208,170	+				-1.6
6,208,170	+				-1.9
6,208,171	-				-1.2
6,208,171	-				-2.4
6,208,171	-				-1.6
6,208,171	-				-0.7
6,208,171	-				-2.1
6,208,171	-				-2.5
6,208,171	-				-1.7
6,208,171	-				-3.1
6,208,171	-				-1.6
6,208,209	+				-2.0
6,208,209	+				-0.4
6,208,209	+				-2.5
6,208,209	+				-2.1
6,208,209	+				-1.9
6,208,210	-				-1.4
6,208,333	+				-1.4
6,208,334	-				-1.2
6,208,383	+				-2.3
6,208,384	-				-0.3
6,208,400	+				-1.8
6,208,400	+				-0.9
6,208,400	+				-2.2
6,208,400	+				-0.0
6,208,401	-				+2.5
6,208,401	-				+0.7
6,208,401	-				+0.6
6,208,511	+				-2.0
6,208,511	+				-0.9
6,208,511	+				-1.0
6,208,512	-				+0.1
6,208,512	-				-0.7
6,208,512	-				-1.9
6,208,512	-				+1.1
6,208,512	-				-0.8
6,208,557	+				-0.4
6,208,557	+				-3.0
6,208,557	+				-1.2
6,208,557	+				-1.3
6,208,557	+				-3.2
6,208,557	+				-1.1
6,208,558	-				-1.3
6,208,558	-				-0.8
6,208,558	-				-3.3
6,208,576	+				-2.8
6,208,576	+				-2.3
6,208,576	+				-3.6
6,208,576	+				-0.4
6,208,577	-				-2.9
6,208,577	-				-0.9
6,208,577	-				-3.4
6,208,577	-				+0.1
6,208,577	-				-1.4
6,208,614	+				-2.5
6,208,614	+				-2.3
6,208,614	+				-3.5
6,208,615	-				-1.0
6,208,713	+				-2.3
6,208,713	+				-1.4
6,208,713	+				-3.1
6,208,713	+				-3.5
6,208,713	+				-3.9
6,208,713	+				-3.5
6,208,713	+				-2.6
6,208,713	+				-1.9
6,208,714	-				-3.0
6,208,714	-				-3.2
6,208,714	-				-2.9
6,208,714	-				-0.8
6,208,714	-				-2.8
6,208,714	-				-0.6
6,208,716	+				-2.1
6,208,716	+				-2.6
6,208,716	+				-3.5
6,208,716	+				-2.5
6,208,716	+				-0.2
6,208,716	+				-1.2
6,208,716	+				+2.1
6,208,716	+				-1.6
6,208,717	-				-0.6
6,208,717	-				-2.1
6,208,717	-				-2.2
6,208,717	-				-2.6
6,208,717	-				-0.5
6,208,717	-				-0.9
6,208,791	+		PFLU_RS27885	0.13	-1.4
6,208,791	+		PFLU_RS27885	0.13	-1.9
6,208,791	+		PFLU_RS27885	0.13	-1.0
6,208,791	+		PFLU_RS27885	0.13	+0.1
6,208,792	-		PFLU_RS27885	0.13	-2.0
6,208,792	-		PFLU_RS27885	0.13	+0.6
6,208,792	-		PFLU_RS27885	0.13	-1.8
6,208,792	-		PFLU_RS27885	0.13	-0.2
6,208,833	+		PFLU_RS27885	0.15	+0.2
6,208,881	+		PFLU_RS27885	0.17	-2.3
6,208,882	-		PFLU_RS27885	0.17	-2.0
6,208,882	-		PFLU_RS27885	0.17	-1.9
6,208,882	-		PFLU_RS27885	0.17	-2.9
6,208,882	-		PFLU_RS27885	0.17	-2.7
6,208,894	-		PFLU_RS27885	0.18	-3.8
6,208,894	-		PFLU_RS27885	0.18	-1.6
6,208,896	+		PFLU_RS27885	0.18	-1.4
6,208,896	+		PFLU_RS27885	0.18	-2.3
6,208,896	+		PFLU_RS27885	0.18	+1.1
6,208,896	+		PFLU_RS27885	0.18	-3.4
6,208,896	+		PFLU_RS27885	0.18	-1.9
6,208,896	+		PFLU_RS27885	0.18	+0.8
6,208,896	+		PFLU_RS27885	0.18	-1.0
6,208,896	+		PFLU_RS27885	0.18	-2.6
6,208,896	+		PFLU_RS27885	0.18	-0.3
6,208,897	-		PFLU_RS27885	0.18	-1.1
6,208,897	-		PFLU_RS27885	0.18	-2.3
6,208,897	-		PFLU_RS27885	0.18	-0.5
6,208,913	-		PFLU_RS27885	0.19	-2.7
6,209,025	+		PFLU_RS27885	0.24	-1.3
6,209,025	+		PFLU_RS27885	0.24	+0.1
6,209,025	+		PFLU_RS27885	0.24	-1.4
6,209,026	-		PFLU_RS27885	0.24	-0.6
6,209,026	-		PFLU_RS27885	0.24	-1.7
6,209,026	-		PFLU_RS27885	0.24	-2.0
6,209,460	+		PFLU_RS27885	0.45	+1.1
6,209,460	+		PFLU_RS27885	0.45	-0.6
6,209,460	+		PFLU_RS27885	0.45	-0.7
6,209,460	+		PFLU_RS27885	0.45	-2.4
6,209,460	+		PFLU_RS27885	0.45	-1.4
6,209,460	+		PFLU_RS27885	0.45	-2.3
6,209,460	+		PFLU_RS27885	0.45	-0.4
6,209,460	+		PFLU_RS27885	0.45	-2.3
6,209,460	+		PFLU_RS27885	0.45	-1.0
6,209,461	-		PFLU_RS27885	0.45	-2.3
6,209,461	-		PFLU_RS27885	0.45	-2.2
6,209,461	-		PFLU_RS27885	0.45	-1.9
6,209,461	-		PFLU_RS27885	0.45	-1.8
6,209,461	-		PFLU_RS27885	0.45	-0.8
6,209,461	-		PFLU_RS27885	0.45	-1.2
6,209,461	-		PFLU_RS27885	0.45	-0.2
6,209,461	-		PFLU_RS27885	0.45	-1.6
6,209,511	+		PFLU_RS27885	0.48	-1.4
6,209,512	-		PFLU_RS27885	0.48	-1.8
6,209,529	+		PFLU_RS27885	0.49	-3.3
6,209,529	+		PFLU_RS27885	0.49	-3.6
6,209,529	+		PFLU_RS27885	0.49	-1.4
6,209,529	+		PFLU_RS27885	0.49	-1.2
6,209,529	+		PFLU_RS27885	0.49	-1.7
6,209,529	+		PFLU_RS27885	0.49	-2.7
6,209,530	-		PFLU_RS27885	0.49	-0.7
6,209,530	-		PFLU_RS27885	0.49	+1.1
6,209,530	-		PFLU_RS27885	0.49	-3.3
6,209,530	-		PFLU_RS27885	0.49	-1.1
6,209,637	+		PFLU_RS27885	0.54	-1.6
6,209,637	+		PFLU_RS27885	0.54	-1.6
6,209,637	+		PFLU_RS27885	0.54	-1.2
6,209,757	+		PFLU_RS27885	0.60	-1.9
6,209,758	-		PFLU_RS27885	0.60	-2.7
6,209,850	+		PFLU_RS27885	0.64	-1.4
6,209,850	+		PFLU_RS27885	0.64	-2.1
6,209,851	-		PFLU_RS27885	0.64	-2.8
6,209,853	+		PFLU_RS27885	0.64	-2.3
6,209,853	+		PFLU_RS27885	0.64	-1.0
6,209,854	-		PFLU_RS27885	0.64	-2.5
6,209,854	-		PFLU_RS27885	0.64	-3.0
6,209,854	-		PFLU_RS27885	0.64	-1.7
6,210,022	+		PFLU_RS27885	0.73	-2.3
6,210,022	+		PFLU_RS27885	0.73	-3.1
6,210,132	+		PFLU_RS27885	0.78	-1.6
6,210,132	+		PFLU_RS27885	0.78	-1.3
6,210,132	+		PFLU_RS27885	0.78	-2.8
6,210,133	-		PFLU_RS27885	0.78	-0.9
6,210,133	-		PFLU_RS27885	0.78	+0.1
6,210,133	-		PFLU_RS27885	0.78	-2.6
6,210,133	-		PFLU_RS27885	0.78	-0.4
6,210,136	+		PFLU_RS27885	0.78	-2.4
6,210,227	-		PFLU_RS27885	0.83	-1.6
6,210,272	-		PFLU_RS27885	0.85	-1.9
6,210,340	+		PFLU_RS27885	0.88	-1.8
6,210,340	+		PFLU_RS27885	0.88	-1.7
6,210,341	-		PFLU_RS27885	0.88	-1.6
6,210,341	-		PFLU_RS27885	0.88	-2.8
6,210,341	-		PFLU_RS27885	0.88	-1.7
6,210,453	+				-2.6
6,210,453	+				-3.1
6,210,453	+				-2.6
6,210,454	-				-0.7
6,210,456	+				-1.3
6,210,457	-				-0.9
6,210,457	-				-1.0
6,210,457	-				-3.0
6,210,465	+				-0.3
6,210,465	+				-2.3
6,210,465	+				-1.2
6,210,465	+				-1.2
6,210,465	+				-0.4
6,210,498	+				-1.0
6,210,498	+				-1.6
6,210,498	+				-0.3
6,210,498	+				-1.8
6,210,498	+				-1.6
6,210,499	-				-3.4
6,210,499	-				-3.1
6,210,499	-				-2.7
6,210,499	-				-3.4
6,210,499	-				-0.2
6,210,499	-				-1.0
6,210,499	-				-2.1
6,210,499	-				-2.6
6,210,499	-				-3.1
6,210,499	-				-2.0
6,210,499	-				-0.9
6,210,603	+				-0.7
6,210,604	-				-0.8
6,210,604	-				-0.9
6,210,657	+		PFLU_RS27890	0.10	-2.0
6,210,658	-		PFLU_RS27890	0.11	-2.4
6,210,658	-		PFLU_RS27890	0.11	-1.3
6,210,744	+		PFLU_RS27890	0.27	+1.1
6,210,744	+		PFLU_RS27890	0.27	-1.8
6,210,744	+		PFLU_RS27890	0.27	-2.1
6,210,744	+		PFLU_RS27890	0.27	-1.5
6,210,744	+		PFLU_RS27890	0.27	-1.2
6,210,744	+		PFLU_RS27890	0.27	+0.6
6,210,744	+		PFLU_RS27890	0.27	-1.4
6,210,744	+		PFLU_RS27890	0.27	-1.3
6,210,744	+		PFLU_RS27890	0.27	-2.6
6,210,745	-		PFLU_RS27890	0.27	-0.2
6,210,745	-		PFLU_RS27890	0.27	+0.1
6,210,745	-		PFLU_RS27890	0.27	-3.1
6,210,745	-		PFLU_RS27890	0.27	-1.4
6,210,745	-		PFLU_RS27890	0.27	-1.7
6,210,745	-		PFLU_RS27890	0.27	-3.2
6,210,745	-		PFLU_RS27890	0.27	-1.8
6,210,745	-		PFLU_RS27890	0.27	-2.0
6,210,745	-		PFLU_RS27890	0.27	-0.7
6,210,745	-		PFLU_RS27890	0.27	-1.2
6,210,745	-		PFLU_RS27890	0.27	+0.4
6,210,745	-		PFLU_RS27890	0.27	-2.0
6,210,745	-		PFLU_RS27890	0.27	-0.4
6,210,745	-		PFLU_RS27890	0.27	+0.3
6,210,745	-		PFLU_RS27890	0.27	+0.1
6,210,777	+		PFLU_RS27890	0.33	-2.7
6,210,777	+		PFLU_RS27890	0.33	-2.6
6,210,778	-		PFLU_RS27890	0.33	-2.3
6,210,778	-		PFLU_RS27890	0.33	+0.8
6,210,778	-		PFLU_RS27890	0.33	-1.9
6,210,778	-		PFLU_RS27890	0.33	-2.6
6,210,778	-		PFLU_RS27890	0.33	-0.2
6,210,882	+		PFLU_RS27890	0.53	-2.2
6,210,882	+		PFLU_RS27890	0.53	-2.4
6,210,883	-		PFLU_RS27890	0.53	+0.4
6,210,883	-		PFLU_RS27890	0.53	-0.9
6,210,883	-		PFLU_RS27890	0.53	-1.2
6,210,883	-		PFLU_RS27890	0.53	-2.1
6,210,883	-		PFLU_RS27890	0.53	-2.0
6,210,883	-		PFLU_RS27890	0.53	-1.9
6,210,883	-		PFLU_RS27890	0.53	-0.0
6,210,969	+		PFLU_RS27890	0.69	+0.1
6,210,970	-		PFLU_RS27890	0.69	+1.0
6,210,985	-		PFLU_RS27890	0.72	-1.6
6,210,985	-		PFLU_RS27890	0.72	+0.3
6,211,024	+		PFLU_RS27890	0.79	-2.8
6,211,024	+		PFLU_RS27890	0.79	-2.3
6,211,024	+		PFLU_RS27890	0.79	-2.1
6,211,024	+		PFLU_RS27890	0.79	-1.6
6,211,025	-		PFLU_RS27890	0.80	-3.0
6,211,050	+		PFLU_RS27890	0.84	-3.2
6,211,050	+		PFLU_RS27890	0.84	-0.4
6,211,050	+		PFLU_RS27890	0.84	-0.4
6,211,050	+		PFLU_RS27890	0.84	-1.9
6,211,050	+		PFLU_RS27890	0.84	-1.9
6,211,051	-		PFLU_RS27890	0.85	+1.1
6,211,051	-		PFLU_RS27890	0.85	-2.0
6,211,140	+				-2.9
6,211,140	+				-2.9
6,211,140	+				-2.4
6,211,141	-				-0.5
6,211,141	-				-1.7
6,211,141	-				-1.6
6,211,160	+				-2.8
6,211,161	-				-1.6
6,211,203	+				-3.1
6,211,203	+				+0.0
6,211,377	+		PFLU_RS27895	0.18	-3.7
6,211,377	+		PFLU_RS27895	0.18	-2.7
6,211,479	+		PFLU_RS27895	0.28	-2.6
6,211,479	+		PFLU_RS27895	0.28	-2.3
6,211,479	+		PFLU_RS27895	0.28	-1.6
6,211,480	-		PFLU_RS27895	0.28	-2.1
6,211,480	-		PFLU_RS27895	0.28	+0.8
6,211,480	-		PFLU_RS27895	0.28	-1.1
6,211,497	+		PFLU_RS27895	0.30	-1.7