Experiment: RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26450 and BWI76_RS26455 overlap by 4 nucleotides BWI76_RS26455 and BWI76_RS26460 overlap by 1 nucleotides BWI76_RS26460 and BWI76_RS26465 overlap by 4 nucleotides
BWI76_RS26450: BWI76_RS26450 - hypothetical protein, at 5,474,310 to 5,475,359
_RS26450
BWI76_RS26455: BWI76_RS26455 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 5,475,356 to 5,475,739
_RS26455
BWI76_RS26460: BWI76_RS26460 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 5,475,739 to 5,476,077
_RS26460
BWI76_RS26465: BWI76_RS26465 - 4-amino-4-deoxy-L-arabinose lipid A transferase, at 5,476,074 to 5,477,729
_RS26465
Position (kb)
5475
5476
5477 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 5474.832 kb on + strand, within BWI76_RS26450 at 5474.875 kb on - strand, within BWI76_RS26450 at 5474.934 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.981 kb on + strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5475.057 kb on + strand, within BWI76_RS26450 at 5475.163 kb on + strand, within BWI76_RS26450 at 5475.178 kb on + strand, within BWI76_RS26450 at 5475.186 kb on - strand, within BWI76_RS26450 at 5475.482 kb on - strand, within BWI76_RS26455 at 5475.482 kb on - strand, within BWI76_RS26455 at 5475.719 kb on - strand at 5475.867 kb on + strand, within BWI76_RS26460 at 5475.872 kb on + strand, within BWI76_RS26460 at 5475.875 kb on - strand, within BWI76_RS26460 at 5475.880 kb on - strand, within BWI76_RS26460 at 5475.967 kb on + strand, within BWI76_RS26460 at 5476.026 kb on + strand, within BWI76_RS26460 at 5476.036 kb on + strand, within BWI76_RS26460 at 5476.044 kb on - strand at 5476.211 kb on + strand at 5476.264 kb on + strand, within BWI76_RS26465 at 5476.272 kb on - strand, within BWI76_RS26465 at 5476.740 kb on - strand, within BWI76_RS26465 at 5476.771 kb on - strand, within BWI76_RS26465 at 5476.792 kb on + strand, within BWI76_RS26465 at 5476.794 kb on - strand, within BWI76_RS26465 at 5476.843 kb on + strand, within BWI76_RS26465 at 5476.843 kb on + strand, within BWI76_RS26465 at 5477.022 kb on - strand, within BWI76_RS26465
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 5,474,832 + BWI76_RS26450 0.50 +0.5 5,474,875 - BWI76_RS26450 0.54 -0.5 5,474,934 - BWI76_RS26450 0.59 +1.0 5,474,952 - BWI76_RS26450 0.61 +1.1 5,474,952 - BWI76_RS26450 0.61 -2.7 5,474,981 + BWI76_RS26450 0.64 -0.2 5,474,989 - BWI76_RS26450 0.65 -0.8 5,474,989 - BWI76_RS26450 0.65 +0.6 5,475,057 + BWI76_RS26450 0.71 +2.1 5,475,163 + BWI76_RS26450 0.81 +0.3 5,475,178 + BWI76_RS26450 0.83 -0.5 5,475,186 - BWI76_RS26450 0.83 -0.3 5,475,482 - BWI76_RS26455 0.33 -2.2 5,475,482 - BWI76_RS26455 0.33 -3.4 5,475,719 - -3.9 5,475,867 + BWI76_RS26460 0.38 -3.0 5,475,872 + BWI76_RS26460 0.39 -2.9 5,475,875 - BWI76_RS26460 0.40 -0.8 5,475,880 - BWI76_RS26460 0.42 -2.3 5,475,967 + BWI76_RS26460 0.67 -1.8 5,476,026 + BWI76_RS26460 0.85 -3.2 5,476,036 + BWI76_RS26460 0.88 -1.4 5,476,044 - -3.5 5,476,211 + -3.7 5,476,264 + BWI76_RS26465 0.11 -0.6 5,476,272 - BWI76_RS26465 0.12 -0.2 5,476,740 - BWI76_RS26465 0.40 -0.8 5,476,771 - BWI76_RS26465 0.42 -1.1 5,476,792 + BWI76_RS26465 0.43 -0.8 5,476,794 - BWI76_RS26465 0.43 -2.9 5,476,843 + BWI76_RS26465 0.46 -0.5 5,476,843 + BWI76_RS26465 0.46 -2.0 5,477,022 - BWI76_RS26465 0.57 +1.0
Or see this region's nucleotide sequence