Experiment: Maltitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03985 and SMc03986 are separated by 145 nucleotides SMc03986 and SMc03987 are separated by 181 nucleotides SMc03987 and SMc03988 overlap by 14 nucleotides SMc03988 and SMc03989 are separated by 363 nucleotides
SMc03985: SMc03985 - adenylate/guanylate cyclase, at 2,982,469 to 2,984,373
SMc03985
SMc03986: SMc03986 - hypothetical protein, at 2,984,519 to 2,984,674
SMc03986
SMc03987: SMc03987 - transport transmembrane protein, at 2,984,856 to 2,986,157
SMc03987
SMc03988: SMc03988 - hypothetical protein, at 2,986,144 to 2,986,332
SMc03988
SMc03989: SMc03989 - hypothetical protein, at 2,986,696 to 2,987,286
SMc03989
Position (kb)
2984
2985
2986
2987 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2983.890 kb on + strand, within SMc03985 at 2984.107 kb on - strand, within SMc03985 at 2984.202 kb on + strand at 2984.202 kb on + strand at 2984.202 kb on + strand at 2984.202 kb on + strand at 2984.202 kb on + strand at 2984.203 kb on - strand at 2984.203 kb on - strand at 2984.203 kb on - strand at 2984.203 kb on - strand at 2984.376 kb on + strand at 2984.414 kb on - strand at 2984.446 kb on + strand at 2984.515 kb on + strand at 2984.515 kb on + strand at 2984.515 kb on + strand at 2984.749 kb on + strand at 2984.749 kb on + strand at 2984.967 kb on + strand at 2985.258 kb on + strand, within SMc03987 at 2985.259 kb on - strand, within SMc03987 at 2985.259 kb on - strand, within SMc03987 at 2985.260 kb on + strand, within SMc03987 at 2985.358 kb on - strand, within SMc03987 at 2985.358 kb on - strand, within SMc03987 at 2985.747 kb on + strand, within SMc03987 at 2985.852 kb on + strand, within SMc03987 at 2985.895 kb on + strand, within SMc03987 at 2985.947 kb on + strand, within SMc03987 at 2985.947 kb on + strand, within SMc03987 at 2985.947 kb on + strand, within SMc03987 at 2985.948 kb on - strand, within SMc03987 at 2985.948 kb on - strand, within SMc03987 at 2985.964 kb on - strand, within SMc03987 at 2985.964 kb on - strand, within SMc03987 at 2986.154 kb on - strand at 2986.360 kb on + strand at 2986.361 kb on - strand at 2986.655 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol (C) remove 2,983,890 + SMc03985 0.75 +0.7 2,984,107 - SMc03985 0.86 -0.0 2,984,202 + -1.0 2,984,202 + +0.7 2,984,202 + +0.6 2,984,202 + +0.9 2,984,202 + +0.7 2,984,203 - -0.0 2,984,203 - -0.3 2,984,203 - +0.6 2,984,203 - +0.7 2,984,376 + +0.6 2,984,414 - -0.8 2,984,446 + +0.8 2,984,515 + +1.0 2,984,515 + +0.6 2,984,515 + +1.3 2,984,749 + +0.6 2,984,749 + +1.8 2,984,967 + -1.7 2,985,258 + SMc03987 0.31 -2.7 2,985,259 - SMc03987 0.31 -1.1 2,985,259 - SMc03987 0.31 -1.2 2,985,260 + SMc03987 0.31 +0.1 2,985,358 - SMc03987 0.39 -2.0 2,985,358 - SMc03987 0.39 +0.9 2,985,747 + SMc03987 0.68 -2.1 2,985,852 + SMc03987 0.76 -0.2 2,985,895 + SMc03987 0.80 -1.0 2,985,947 + SMc03987 0.84 -2.0 2,985,947 + SMc03987 0.84 -1.8 2,985,947 + SMc03987 0.84 -0.5 2,985,948 - SMc03987 0.84 -2.1 2,985,948 - SMc03987 0.84 -2.1 2,985,964 - SMc03987 0.85 -1.6 2,985,964 - SMc03987 0.85 -2.3 2,986,154 - -0.7 2,986,360 + -0.1 2,986,361 - -0.3 2,986,655 + -1.6
Or see this region's nucleotide sequence