Experiment: Maltitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00878 and SMc00877 are separated by 153 nucleotides SMc00877 and SMc00876 are separated by 461 nucleotides
SMc00878: SMc00878 - transcriptional regulator, at 908,239 to 908,979
SMc00878
SMc00877: SMc00877 - transcriptional regulator, at 909,133 to 909,966
SMc00877
SMc00876: SMc00876 - ATP-binding MRP protein, at 910,428 to 911,582
SMc00876
Position (kb) 909
910 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 908.181 kb on + strand at 908.182 kb on - strand at 908.259 kb on + strand at 908.259 kb on + strand at 908.260 kb on - strand at 908.260 kb on - strand at 908.260 kb on - strand at 908.260 kb on - strand at 908.261 kb on + strand at 908.261 kb on + strand at 908.261 kb on + strand at 908.261 kb on + strand at 908.261 kb on + strand at 908.262 kb on - strand at 908.533 kb on + strand, within SMc00878 at 908.533 kb on + strand, within SMc00878 at 908.533 kb on + strand, within SMc00878 at 908.588 kb on + strand, within SMc00878 at 908.588 kb on + strand, within SMc00878 at 908.588 kb on + strand, within SMc00878 at 908.589 kb on - strand, within SMc00878 at 908.589 kb on - strand, within SMc00878 at 908.589 kb on - strand, within SMc00878 at 908.589 kb on - strand, within SMc00878 at 908.627 kb on - strand, within SMc00878 at 908.627 kb on - strand, within SMc00878 at 908.738 kb on + strand, within SMc00878 at 908.738 kb on + strand, within SMc00878 at 908.738 kb on + strand, within SMc00878 at 908.738 kb on + strand at 908.738 kb on + strand, within SMc00878 at 908.738 kb on + strand, within SMc00878 at 908.739 kb on - strand, within SMc00878 at 908.739 kb on - strand, within SMc00878 at 908.739 kb on - strand, within SMc00878 at 908.739 kb on - strand, within SMc00878 at 908.739 kb on - strand, within SMc00878 at 908.740 kb on + strand, within SMc00878 at 908.741 kb on - strand, within SMc00878 at 908.741 kb on - strand, within SMc00878 at 908.879 kb on - strand, within SMc00878 at 908.880 kb on + strand, within SMc00878 at 908.880 kb on + strand, within SMc00878 at 908.881 kb on - strand, within SMc00878 at 908.893 kb on + strand, within SMc00878 at 908.894 kb on - strand, within SMc00878 at 908.957 kb on + strand at 908.957 kb on + strand at 908.958 kb on - strand at 908.997 kb on + strand at 908.997 kb on + strand at 908.998 kb on - strand at 908.998 kb on - strand at 909.182 kb on + strand at 909.209 kb on + strand at 909.243 kb on + strand, within SMc00877 at 909.281 kb on + strand, within SMc00877 at 909.281 kb on + strand, within SMc00877 at 909.316 kb on + strand, within SMc00877 at 909.387 kb on - strand, within SMc00877 at 909.445 kb on + strand, within SMc00877 at 909.445 kb on + strand, within SMc00877 at 909.445 kb on + strand, within SMc00877 at 909.445 kb on + strand, within SMc00877 at 909.446 kb on - strand, within SMc00877 at 909.571 kb on + strand, within SMc00877 at 909.571 kb on + strand, within SMc00877 at 909.571 kb on + strand, within SMc00877 at 909.572 kb on - strand, within SMc00877 at 909.599 kb on + strand, within SMc00877 at 909.599 kb on + strand, within SMc00877 at 909.614 kb on - strand, within SMc00877 at 909.727 kb on + strand, within SMc00877 at 909.727 kb on + strand, within SMc00877 at 909.727 kb on + strand, within SMc00877 at 909.727 kb on + strand, within SMc00877 at 909.728 kb on - strand, within SMc00877 at 909.847 kb on - strand, within SMc00877 at 909.880 kb on + strand, within SMc00877 at 909.880 kb on + strand, within SMc00877 at 909.881 kb on - strand, within SMc00877 at 909.955 kb on + strand at 909.955 kb on + strand at 909.955 kb on + strand at 909.956 kb on - strand at 909.957 kb on + strand at 909.965 kb on - strand at 909.977 kb on + strand at 909.977 kb on + strand at 910.024 kb on + strand at 910.041 kb on - strand at 910.203 kb on - strand at 910.263 kb on + strand at 910.263 kb on + strand at 910.264 kb on - strand at 910.334 kb on + strand at 910.335 kb on - strand at 910.338 kb on + strand at 910.338 kb on + strand at 910.339 kb on - strand at 910.339 kb on - strand at 910.339 kb on - strand at 910.341 kb on + strand at 910.341 kb on + strand at 910.341 kb on + strand at 910.342 kb on - strand at 910.342 kb on - strand at 910.342 kb on - strand at 910.345 kb on + strand at 910.345 kb on + strand at 910.345 kb on + strand at 910.346 kb on - strand at 910.346 kb on - strand at 910.456 kb on + strand at 910.520 kb on - strand at 910.799 kb on + strand, within SMc00876 at 910.911 kb on + strand, within SMc00876 at 910.912 kb on - strand, within SMc00876 at 910.912 kb on - strand, within SMc00876 at 910.912 kb on - strand, within SMc00876
Per-strain Table
Position Strand Gene LocusTag Fraction Maltitol (C) remove 908,181 + -0.2 908,182 - +0.3 908,259 + -0.5 908,259 + -1.2 908,260 - +0.8 908,260 - +1.1 908,260 - +0.4 908,260 - +0.2 908,261 + -0.1 908,261 + +0.1 908,261 + +0.6 908,261 + -0.7 908,261 + -1.1 908,262 - +0.1 908,533 + SMc00878 0.40 -0.7 908,533 + SMc00878 0.40 -1.0 908,533 + SMc00878 0.40 -0.1 908,588 + SMc00878 0.47 -0.6 908,588 + SMc00878 0.47 +0.1 908,588 + SMc00878 0.47 -0.3 908,589 - SMc00878 0.47 +0.2 908,589 - SMc00878 0.47 -0.2 908,589 - SMc00878 0.47 +0.5 908,589 - SMc00878 0.47 +0.1 908,627 - SMc00878 0.52 +0.2 908,627 - SMc00878 0.52 +1.3 908,738 + SMc00878 0.67 -0.2 908,738 + SMc00878 0.67 +0.3 908,738 + SMc00878 0.67 +0.5 908,738 + +0.9 908,738 + SMc00878 0.67 +0.3 908,738 + SMc00878 0.67 +0.2 908,739 - SMc00878 0.67 +0.1 908,739 - SMc00878 0.67 +0.3 908,739 - SMc00878 0.67 -0.5 908,739 - SMc00878 0.67 +1.1 908,739 - SMc00878 0.67 +0.2 908,740 + SMc00878 0.68 -0.4 908,741 - SMc00878 0.68 -0.2 908,741 - SMc00878 0.68 +0.5 908,879 - SMc00878 0.86 +0.0 908,880 + SMc00878 0.87 +0.0 908,880 + SMc00878 0.87 +0.4 908,881 - SMc00878 0.87 -0.7 908,893 + SMc00878 0.88 -0.1 908,894 - SMc00878 0.88 -0.0 908,957 + -0.5 908,957 + +0.2 908,958 - -0.4 908,997 + -0.0 908,997 + +0.0 908,998 - +0.3 908,998 - +0.1 909,182 + -0.2 909,209 + -0.1 909,243 + SMc00877 0.13 -0.7 909,281 + SMc00877 0.18 -0.8 909,281 + SMc00877 0.18 -0.3 909,316 + SMc00877 0.22 -1.1 909,387 - SMc00877 0.30 -0.3 909,445 + SMc00877 0.37 -0.5 909,445 + SMc00877 0.37 -1.4 909,445 + SMc00877 0.37 -0.8 909,445 + SMc00877 0.37 -0.6 909,446 - SMc00877 0.38 -0.4 909,571 + SMc00877 0.53 +0.0 909,571 + SMc00877 0.53 -0.0 909,571 + SMc00877 0.53 +0.6 909,572 - SMc00877 0.53 -2.4 909,599 + SMc00877 0.56 -1.7 909,599 + SMc00877 0.56 -1.4 909,614 - SMc00877 0.58 -2.7 909,727 + SMc00877 0.71 -1.5 909,727 + SMc00877 0.71 -0.9 909,727 + SMc00877 0.71 -0.1 909,727 + SMc00877 0.71 -1.3 909,728 - SMc00877 0.71 +0.1 909,847 - SMc00877 0.86 -0.9 909,880 + SMc00877 0.90 -0.9 909,880 + SMc00877 0.90 -1.6 909,881 - SMc00877 0.90 +0.9 909,955 + -1.3 909,955 + -0.9 909,955 + -0.4 909,956 - -1.4 909,957 + -1.2 909,965 - -0.9 909,977 + +0.1 909,977 + +0.4 910,024 + -0.3 910,041 - -0.1 910,203 - +0.2 910,263 + +0.1 910,263 + -0.2 910,264 - -0.1 910,334 + +0.4 910,335 - -0.9 910,338 + +0.3 910,338 + +0.3 910,339 - -5.0 910,339 - -2.8 910,339 - -0.9 910,341 + +1.2 910,341 + +0.0 910,341 + +1.1 910,342 - -1.6 910,342 - -1.6 910,342 - -1.7 910,345 + +0.6 910,345 + -0.9 910,345 + -0.1 910,346 - -1.3 910,346 - -2.2 910,456 + -4.4 910,520 - -3.7 910,799 + SMc00876 0.32 -1.7 910,911 + SMc00876 0.42 -4.0 910,912 - SMc00876 0.42 -3.6 910,912 - SMc00876 0.42 -1.5 910,912 - SMc00876 0.42 -2.5
Or see this region's nucleotide sequence