Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2603

Experiment: KB with Harmalol 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Harmalol 10 mM
3,056,303	+		Psyr_2602	0.87	-0.3
3,056,303	+		Psyr_2602	0.87	-2.4
3,056,303	+		Psyr_2602	0.87	-0.8
3,056,303	+		Psyr_2602	0.87	-2.5
3,056,304	-		Psyr_2602	0.87	+0.1
3,056,304	-		Psyr_2602	0.87	-0.4
3,056,304	-		Psyr_2602	0.87	-0.7
3,056,304	-		Psyr_2602	0.87	-1.5
3,056,367	-				+0.8
3,056,392	+				-1.6
3,056,393	-				+0.8
3,056,407	+				+0.6
3,056,407	+				-0.2
3,056,408	-				-1.9
3,056,461	+				+2.5
3,056,477	+				-1.2
3,056,477	+				-1.1
3,056,484	+				-1.1
3,056,496	+				+0.1
3,056,524	-				+0.2
3,056,540	+				-0.2
3,056,540	+				+0.1
3,056,541	-				-0.5
3,056,546	+				+0.5
3,056,547	-				-1.9
3,056,629	+				-0.0
3,056,629	+				+0.0
3,056,630	-				-0.2
3,056,648	+				+0.2
3,056,648	+				-1.0
3,056,725	+				+0.5
3,056,726	-				+0.2
3,056,752	+				-0.4
3,056,752	+				-1.7
3,056,752	+				+0.2
3,056,752	+				-1.0
3,056,752	+				-1.4
3,056,752	+				-1.0
3,056,752	+				+0.8
3,056,752	+				-1.0
3,056,752	+				-0.2
3,056,753	-				+1.8
3,056,753	-				-0.0
3,056,753	-				-0.2
3,056,753	-				-0.3
3,056,753	-				-0.6
3,056,753	-				-1.5
3,056,753	-				+0.6
3,056,835	+				+1.4
3,056,836	-				+0.9
3,057,016	+				-0.8
3,057,016	+				+0.4
3,057,016	+				-0.8
3,057,016	+				+1.2
3,057,016	+				-2.4
3,057,016	+				+0.5
3,057,016	+				+0.8
3,057,016	+				-1.5
3,057,017	-				+1.4
3,057,017	-				-0.4
3,057,017	-				-1.0
3,057,017	-				+0.9
3,057,017	-				+0.6
3,057,057	+				+0.4
3,057,058	-				-0.7
3,057,058	-				+0.1
3,057,058	-				-0.5
3,057,058	-				+0.2
3,057,058	-				+3.4
3,057,058	-				+0.8
3,057,082	+				-0.8
3,057,082	+				-0.0
3,057,082	+				+0.3
3,057,082	+				-2.0
3,057,083	-				+0.0
3,057,083	-				-0.8
3,057,083	-				+0.0
3,057,092	-				-0.2
3,057,095	+				+1.0
3,057,096	-				+0.0
3,057,096	-				-0.1
3,057,150	-				-0.1
3,057,252	+				-0.5
3,057,252	+				-0.2
3,057,252	+				-0.5
3,057,252	+				-1.8
3,057,252	+				+0.5
3,057,252	+				+1.0
3,057,252	+				-0.6
3,057,253	-				-1.3
3,057,253	-				+1.3
3,057,253	-				+1.4
3,057,321	+		Psyr_2603	0.14	-0.8
3,057,569	+		Psyr_2603	0.35	+0.4
3,057,569	+		Psyr_2603	0.35	-0.1
3,057,570	-		Psyr_2603	0.35	-0.3
3,057,570	-		Psyr_2603	0.35	-0.4
3,057,570	-		Psyr_2603	0.35	-0.4
3,057,570	-		Psyr_2603	0.35	-0.3
3,057,570	-		Psyr_2603	0.35	-1.5
3,057,570	-		Psyr_2603	0.35	-1.4
3,057,570	-		Psyr_2603	0.35	-0.2
3,057,679	+		Psyr_2603	0.44	-0.8
3,057,679	+		Psyr_2603	0.44	+0.1
3,057,679	+		Psyr_2603	0.44	-1.5
3,057,679	+		Psyr_2603	0.44	-0.7
3,057,680	-		Psyr_2603	0.45	+0.3
3,057,680	-		Psyr_2603	0.45	-0.3
3,057,680	-		Psyr_2603	0.45	-0.1
3,057,680	-		Psyr_2603	0.45	-0.2
3,057,909	+		Psyr_2603	0.64	-0.3
3,057,910	-		Psyr_2603	0.64	-0.8
3,057,942	+		Psyr_2603	0.67	+0.3
3,057,942	+		Psyr_2603	0.67	-0.3
3,057,943	-		Psyr_2603	0.67	-0.2
3,057,943	-		Psyr_2603	0.67	-0.6
3,057,943	-		Psyr_2603	0.67	-0.6
3,057,943	-		Psyr_2603	0.67	-0.2
3,058,032	+		Psyr_2603	0.75	-0.6
3,058,032	+		Psyr_2603	0.75	-1.7
3,058,075	-		Psyr_2603	0.78	-1.5
3,058,075	-		Psyr_2603	0.78	-1.1
3,058,075	-		Psyr_2603	0.78	-3.5
3,058,075	-		Psyr_2603	0.78	+1.0
3,058,075	-		Psyr_2603	0.78	+1.0
3,058,075	-		Psyr_2603	0.78	-1.8
3,058,075	-		Psyr_2603	0.78	-0.8
3,058,075	-		Psyr_2603	0.78	-1.2
3,058,126	+		Psyr_2603	0.83	-1.4
3,058,127	-		Psyr_2603	0.83	+0.4
3,058,176	+		Psyr_2603	0.87	-0.7
3,058,176	+		Psyr_2603	0.87	-2.0
3,058,176	+		Psyr_2603	0.87	+0.8
3,058,177	-		Psyr_2603	0.87	+1.8
3,058,177	-		Psyr_2603	0.87	-1.0
3,058,177	-		Psyr_2603	0.87	-0.0
3,058,177	-		Psyr_2603	0.87	+1.9
3,058,183	+		Psyr_2603	0.88	+0.8
3,058,183	+		Psyr_2603	0.88	-1.0
3,058,183	+		Psyr_2603	0.88	-0.2
3,058,183	+		Psyr_2603	0.88	-0.1
3,058,184	-		Psyr_2603	0.88	+0.3
3,058,184	-		Psyr_2603	0.88	-0.5
3,058,221	+				-1.4
3,058,222	-				-0.5
3,058,222	-				+2.8
3,058,222	-				+0.5
3,058,222	-				-0.6
3,058,225	+				-0.5
3,058,261	+				-1.8
3,058,261	+				-1.2
3,058,275	-				+0.1
3,058,333	-				-1.4
3,058,346	-				-1.2
3,058,346	-				+0.8
3,058,423	-				-3.2
3,058,433	+				-0.2
3,058,433	+				+0.4
3,058,433	+				-2.9
3,058,445	+				-0.5
3,058,445	+				-0.6
3,058,445	+				+0.0
3,058,446	-				-2.2
3,058,446	-				-0.2
3,058,446	-				-0.4
3,058,446	-				-1.0
3,058,446	-				-1.5
3,058,499	+				-2.2
3,058,499	+				+0.8
3,058,528	-				-0.2
3,058,567	-				-1.2
3,058,583	+				-0.6
3,058,583	+				-0.0
3,058,583	+				+0.5
3,058,583	+				+0.5
3,058,583	+				-1.7
3,058,583	+				-0.7
3,058,583	+				+0.0
3,058,584	-				-1.5
3,058,584	-				+0.8
3,058,584	-				-1.2
3,058,584	-				+0.2
3,058,584	-				-2.2
3,058,586	+				+1.2
3,058,587	-				+1.2
3,058,675	+		Psyr_2604	0.17	-0.5
3,058,676	-		Psyr_2604	0.17	+2.0
3,058,715	+		Psyr_2604	0.23	+0.0
3,058,715	+		Psyr_2604	0.23	+0.8
3,058,715	+		Psyr_2604	0.23	-1.2
3,058,716	-		Psyr_2604	0.23	+1.4
3,058,716	-		Psyr_2604	0.23	+3.1
3,058,716	-		Psyr_2604	0.23	+0.5
3,058,769	+		Psyr_2604	0.32	-2.7
3,058,769	+		Psyr_2604	0.32	-0.9
3,058,769	+		Psyr_2604	0.32	-1.0
3,058,770	-		Psyr_2604	0.32	+0.3
3,058,820	+		Psyr_2604	0.41	-1.9
3,058,820	+		Psyr_2604	0.41	+0.1
3,058,820	+		Psyr_2604	0.41	-1.0
3,059,071	-		Psyr_2604	0.82	+0.1
3,059,148	-				+0.4
3,059,219	-				-0.4
3,059,222	+				-0.9
3,059,222	+				+0.3
3,059,222	+				-0.3
3,059,222	+				+0.7
3,059,223	-				-0.3
3,059,223	-				-0.5
3,059,223	-				+1.3
3,059,223	-				+0.8
3,059,226	+				-0.5
3,059,226	+				+1.6
3,059,226	+				-0.5
3,059,226	+				+0.0
3,059,226	+				+0.3
3,059,226	+				-1.6
3,059,226	+				-0.9
3,059,226	+				-0.2
3,059,227	-				-0.2
3,059,227	-				-0.0
3,059,227	-				-0.2
3,059,230	+				-1.0
3,059,230	+				-0.1
3,059,246	+				-0.4
3,059,246	+				-0.4
3,059,246	+				-0.5
3,059,246	+				-0.1
3,059,246	+				-0.0
3,059,246	+				+0.3
3,059,247	-				+0.8
3,059,247	-				+0.1
3,059,247	-				-1.2
3,059,247	-				+2.0
3,059,292	+				+0.6
3,059,292	+				-0.2
3,059,293	-				+0.2
3,059,293	-				-1.2
3,059,293	-				+1.4
3,059,293	-				-0.5