Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25570

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
5,313,230	+		BWI76_RS25565	0.46	-0.3
5,314,151	-				+0.4
5,314,152	+				-1.2
5,314,160	+				+1.1
5,314,160	+				+0.9
5,314,167	+				+1.1
5,314,168	+				+0.0
5,314,168	-				+0.2
5,314,168	-				+0.5
5,314,168	-				+0.2
5,314,168	-				+0.1
5,314,168	-				-0.7
5,314,168	-				-0.1
5,314,170	+				-0.4
5,314,170	+				+1.1
5,314,175	-				+0.1
5,314,176	-				-0.2
5,314,176	-				-0.3
5,314,178	+				-2.1
5,314,178	-				-0.3
5,314,178	-				+1.0
5,314,178	-				+0.6
5,314,178	-				-0.9
5,314,178	-				-0.5
5,314,178	-				-0.3
5,314,181	-				+2.1
5,314,181	-				+0.0
5,314,223	+		BWI76_RS25575	0.13	-1.2
5,314,231	-		BWI76_RS25575	0.14	-0.2
5,314,231	-		BWI76_RS25575	0.14	-2.4
5,314,233	+		BWI76_RS25575	0.15	+0.1
5,314,233	+		BWI76_RS25575	0.15	+0.8
5,314,241	-		BWI76_RS25575	0.16	-0.8
5,314,241	-		BWI76_RS25575	0.16	+0.3
5,314,241	-		BWI76_RS25575	0.16	-0.9
5,314,241	-		BWI76_RS25575	0.16	+0.0
5,314,250	-		BWI76_RS25575	0.17	-1.7
5,314,288	+		BWI76_RS25575	0.23	-1.9
5,314,288	+		BWI76_RS25575	0.23	-1.5
5,314,288	+		BWI76_RS25575	0.23	-3.3
5,314,296	-		BWI76_RS25575	0.24	-0.1
5,314,296	-		BWI76_RS25575	0.24	-0.9
5,314,296	-		BWI76_RS25575	0.24	+0.3
5,314,296	-		BWI76_RS25575	0.24	-0.2
5,314,296	-		BWI76_RS25575	0.24	-0.2
5,314,296	-		BWI76_RS25575	0.24	-1.3
5,314,296	-		BWI76_RS25575	0.24	-2.1
5,314,296	-		BWI76_RS25575	0.24	-0.0
5,314,296	-		BWI76_RS25575	0.24	+0.6
5,314,296	-		BWI76_RS25575	0.24	+0.9
5,314,296	-		BWI76_RS25575	0.24	+1.7
5,314,296	-		BWI76_RS25575	0.24	+0.3
5,314,296	-		BWI76_RS25575	0.24	-0.7
5,314,296	-		BWI76_RS25575	0.24	-1.5
5,314,296	-		BWI76_RS25575	0.24	-2.1
5,314,329	+		BWI76_RS25575	0.29	-1.2
5,314,331	+		BWI76_RS25575	0.30	-0.5
5,314,346	+		BWI76_RS25575	0.32	-0.2
5,314,354	+		BWI76_RS25575	0.33	+0.2
5,314,402	+		BWI76_RS25575	0.41	+0.1
5,314,402	+		BWI76_RS25575	0.41	+0.0
5,314,402	+		BWI76_RS25575	0.41	-0.6
5,314,415	+		BWI76_RS25575	0.43	-0.6
5,314,452	+		BWI76_RS25575	0.48	+0.1
5,314,523	+		BWI76_RS25575	0.59	+0.1
5,314,526	+		BWI76_RS25575	0.60	+0.5
5,314,531	+		BWI76_RS25575	0.60	-0.9
5,314,531	+		BWI76_RS25575	0.60	-0.5
5,314,531	+		BWI76_RS25575	0.60	-0.6
5,314,531	+		BWI76_RS25575	0.60	-2.3
5,314,534	-		BWI76_RS25575	0.61	+1.1
5,314,538	+		BWI76_RS25575	0.61	-0.8
5,314,538	+		BWI76_RS25575	0.61	-1.9
5,314,546	-		BWI76_RS25575	0.63	-2.6
5,314,546	-		BWI76_RS25575	0.63	-3.3
5,314,546	-		BWI76_RS25575	0.63	+0.2
5,314,567	-		BWI76_RS25575	0.66	+1.1
5,314,569	+		BWI76_RS25575	0.66	-0.3
5,314,584	+		BWI76_RS25575	0.69	-1.3
5,314,593	+		BWI76_RS25575	0.70	-0.5
5,314,617	+		BWI76_RS25575	0.74	-0.3
5,314,617	+		BWI76_RS25575	0.74	+1.5
5,314,636	+		BWI76_RS25575	0.76	-3.3
5,314,636	+		BWI76_RS25575	0.76	+0.3
5,314,639	+		BWI76_RS25575	0.77	+0.2
5,314,639	+		BWI76_RS25575	0.77	-0.7
5,314,639	+		BWI76_RS25575	0.77	+1.7
5,314,642	+		BWI76_RS25575	0.77	-1.1
5,314,642	+		BWI76_RS25575	0.77	-1.1
5,314,642	+		BWI76_RS25575	0.77	+0.0
5,314,642	+		BWI76_RS25575	0.77	-0.2
5,314,645	-		BWI76_RS25575	0.78	-1.9
5,314,645	-		BWI76_RS25575	0.78	-0.9
5,314,645	-		BWI76_RS25575	0.78	-0.2
5,314,647	-		BWI76_RS25575	0.78	-1.0
5,314,647	-		BWI76_RS25575	0.78	-3.3
5,314,647	-		BWI76_RS25575	0.78	-0.7
5,314,649	+		BWI76_RS25575	0.78	+0.3
5,314,650	-		BWI76_RS25575	0.79	-0.4
5,314,662	-		BWI76_RS25575	0.80	-1.4
5,314,684	+		BWI76_RS25575	0.84	-1.1
5,314,684	+				-0.5
5,314,691	-		BWI76_RS25575	0.85	+0.8
5,314,691	-		BWI76_RS25575	0.85	-0.0
5,314,694	+		BWI76_RS25575	0.85	+0.1
5,314,694	+		BWI76_RS25575	0.85	-0.6
5,314,697	-		BWI76_RS25575	0.86	-0.1
5,314,702	-		BWI76_RS25575	0.87	-2.1
5,314,708	+		BWI76_RS25575	0.88	-1.5
5,314,708	+		BWI76_RS25575	0.88	-2.9
5,314,708	+		BWI76_RS25575	0.88	+0.8
5,314,708	+				+1.1
5,314,716	-		BWI76_RS25575	0.89	-0.9
5,314,716	-		BWI76_RS25575	0.89	-0.0
5,314,716	-		BWI76_RS25575	0.89	-1.7
5,314,716	-		BWI76_RS25575	0.89	+1.6
5,314,720	+		BWI76_RS25575	0.89	+1.4
5,314,720	+		BWI76_RS25575	0.89	-2.6
5,314,739	+				-1.5
5,314,761	-				+0.2
5,314,768	+				+1.1
5,314,778	+				-1.2
5,314,784	+				-0.8
5,314,784	+				-0.6
5,314,792	-				-0.9
5,314,792	-				+0.1
5,314,792	-				-0.6
5,314,792	-				-0.9
5,314,792	-				-0.1
5,314,792	-				+0.8
5,314,792	-				+1.1
5,314,793	-				-2.2
5,314,794	+				+1.1
5,314,794	+				-0.5
5,314,797	+				+1.1
5,314,797	+				+0.5
5,314,800	-				-2.5
5,314,802	+				+1.1
5,314,802	-				-0.9
5,314,802	-				-0.8
5,314,802	-				+1.1
5,314,802	-				+0.3
5,314,802	-				-3.1
5,314,802	-				-0.7
5,314,807	-				-1.9
5,314,810	+				-0.6
5,314,810	+				+0.1
5,314,810	+				-0.5
5,314,810	+				-0.8
5,314,818	-				+0.1
5,314,838	+				+0.1
5,314,838	+				-2.4
5,314,838	+				-0.5
5,314,846	-				+0.1
5,314,846	-				-0.5