Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16325 and BWI76_RS16330 are separated by 56 nucleotides BWI76_RS16330 and BWI76_RS16335 are separated by 177 nucleotides BWI76_RS16335 and BWI76_RS16340 are separated by 103 nucleotides
BWI76_RS16325: BWI76_RS16325 - adenosine deaminase, at 3,388,669 to 3,389,670
_RS16325
BWI76_RS16330: BWI76_RS16330 - oxidoreductase, at 3,389,727 to 3,390,767
_RS16330
BWI76_RS16335: BWI76_RS16335 - division septum protein Blr, at 3,390,945 to 3,391,094
_RS16335
BWI76_RS16340: BWI76_RS16340 - aryl-phospho-beta-D-glucosidase, at 3,391,198 to 3,392,568
_RS16340
Position (kb)
3389
3390
3391 Strain fitness (log2 ratio)
-2
-1
0
1 at 3388.813 kb on - strand, within BWI76_RS16325 at 3388.852 kb on + strand, within BWI76_RS16325 at 3388.873 kb on - strand, within BWI76_RS16325 at 3388.944 kb on + strand, within BWI76_RS16325 at 3389.252 kb on - strand, within BWI76_RS16325 at 3389.421 kb on + strand, within BWI76_RS16325 at 3389.725 kb on + strand at 3390.090 kb on + strand, within BWI76_RS16330 at 3390.199 kb on - strand, within BWI76_RS16330 at 3390.437 kb on - strand, within BWI76_RS16330 at 3390.553 kb on - strand, within BWI76_RS16330 at 3390.856 kb on - strand at 3391.018 kb on - strand, within BWI76_RS16335 at 3391.100 kb on + strand at 3391.237 kb on + strand at 3391.303 kb on - strand at 3391.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,388,813 - BWI76_RS16325 0.14 -1.4 3,388,852 + BWI76_RS16325 0.18 -0.2 3,388,873 - BWI76_RS16325 0.20 -1.1 3,388,944 + BWI76_RS16325 0.27 +0.6 3,389,252 - BWI76_RS16325 0.58 +0.1 3,389,421 + BWI76_RS16325 0.75 -0.5 3,389,725 + -0.9 3,390,090 + BWI76_RS16330 0.35 -1.7 3,390,199 - BWI76_RS16330 0.45 -1.0 3,390,437 - BWI76_RS16330 0.68 -2.2 3,390,553 - BWI76_RS16330 0.79 +0.9 3,390,856 - -0.3 3,391,018 - BWI76_RS16335 0.49 -0.0 3,391,100 + +0.3 3,391,237 + +0.1 3,391,303 - -0.1 3,391,330 - -1.1
Or see this region's nucleotide sequence