Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15380

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
3,221,817	+				-1.8
3,221,837	-		BWI76_RS15375	0.12	+1.7
3,221,958	+		BWI76_RS15375	0.32	+0.6
3,221,963	+		BWI76_RS15375	0.33	-0.0
3,222,019	+		BWI76_RS15375	0.42	+0.3
3,222,075	+		BWI76_RS15375	0.51	+0.5
3,222,075	+		BWI76_RS15375	0.51	+1.1
3,222,083	-		BWI76_RS15375	0.52	-0.1
3,222,119	+		BWI76_RS15375	0.58	-2.4
3,222,301	-		BWI76_RS15375	0.88	+0.7
3,222,303	-		BWI76_RS15375	0.88	-0.4
3,222,303	-		BWI76_RS15375	0.88	-0.2
3,222,303	-		BWI76_RS15375	0.88	-0.6
3,222,316	-				-1.8
3,222,332	-				+1.1
3,222,535	-				-1.3
3,222,540	-				+0.9
3,222,540	-				-0.3
3,222,540	-				-1.8
3,222,568	+				-0.5
3,222,589	-				-0.2
3,222,705	+				-2.2
3,222,719	+				+0.8
3,222,867	+		BWI76_RS15380	0.16	-1.3
3,222,874	+		BWI76_RS15380	0.17	+0.4
3,222,879	+		BWI76_RS15380	0.18	-1.3
3,222,905	+		BWI76_RS15380	0.24	+0.2
3,222,949	+		BWI76_RS15380	0.33	-0.6
3,222,984	+		BWI76_RS15380	0.40	-0.8
3,223,057	+		BWI76_RS15380	0.55	+0.1
3,223,099	+		BWI76_RS15380	0.63	-1.5
3,223,099	+		BWI76_RS15380	0.63	+0.8
3,223,099	+		BWI76_RS15380	0.63	-2.2
3,223,099	+		BWI76_RS15380	0.63	-3.6
3,223,099	+		BWI76_RS15380	0.63	-1.8
3,223,099	+		BWI76_RS15380	0.63	-0.3
3,223,099	+		BWI76_RS15380	0.63	+1.0
3,223,099	+		BWI76_RS15380	0.63	-1.0
3,223,099	+		BWI76_RS15380	0.63	+1.2
3,223,099	+		BWI76_RS15380	0.63	-2.3
3,223,099	+		BWI76_RS15380	0.63	+0.7
3,223,099	+		BWI76_RS15380	0.63	+1.2
3,223,107	-		BWI76_RS15380	0.65	+2.6
3,223,131	+		BWI76_RS15380	0.70	+0.5
3,223,138	-		BWI76_RS15380	0.71	-1.8
3,223,195	-		BWI76_RS15380	0.83	-0.3
3,223,197	+				+1.0
3,223,285	-				-1.6
3,223,287	+				-0.8
3,223,350	+				+0.2
3,223,350	+				-0.0
3,223,350	+				-0.7
3,223,355	+				-2.8
3,223,358	-				+0.2
3,223,358	-				-0.0
3,223,358	-				-0.1
3,223,358	-				+0.1
3,223,369	-				-1.1
3,223,375	-				+0.6
3,223,430	-				+0.4
3,223,455	+		BWI76_RS15385	0.12	+0.5
3,223,455	+		BWI76_RS15385	0.12	-0.0
3,223,456	+		BWI76_RS15385	0.12	+0.4
3,223,463	+		BWI76_RS15385	0.15	-1.0
3,223,463	+		BWI76_RS15385	0.15	+0.6
3,223,463	+		BWI76_RS15385	0.15	-2.0
3,223,464	-		BWI76_RS15385	0.15	-0.1
3,223,471	-		BWI76_RS15385	0.18	+2.4
3,223,471	-		BWI76_RS15385	0.18	+1.1
3,223,471	-		BWI76_RS15385	0.18	-1.3
3,223,480	+		BWI76_RS15385	0.21	-1.3
3,223,488	-		BWI76_RS15385	0.24	+0.5
3,223,495	+		BWI76_RS15385	0.26	+0.8
3,223,505	+		BWI76_RS15385	0.30	-1.0
3,223,505	+		BWI76_RS15385	0.30	+1.5
3,223,505	+		BWI76_RS15385	0.30	-0.0
3,223,505	+		BWI76_RS15385	0.30	-0.2
3,223,507	+		BWI76_RS15385	0.30	+0.1
3,223,513	-		BWI76_RS15385	0.33	-0.3
3,223,513	-		BWI76_RS15385	0.33	-0.7
3,223,513	-		BWI76_RS15385	0.33	+0.6
3,223,552	-		BWI76_RS15385	0.47	-1.0
3,223,606	+		BWI76_RS15385	0.66	-1.0
3,223,623	+		BWI76_RS15385	0.72	-0.6
3,223,631	-		BWI76_RS15385	0.75	+1.0
3,223,631	-		BWI76_RS15385	0.75	-0.4
3,223,631	-		BWI76_RS15385	0.75	-2.9
3,223,765	-				-1.2
3,223,809	-				-1.2
3,223,825	+				-0.0
3,223,831	+				-0.0
3,223,833	-				+2.2
3,223,839	-				-1.0
3,223,839	-				-0.9
3,224,001	-		BWI76_RS15390	0.15	-0.2
3,224,001	-		BWI76_RS15390	0.15	-2.5
3,224,099	-		BWI76_RS15390	0.25	-0.2
3,224,147	-		BWI76_RS15390	0.29	+0.8
3,224,192	-		BWI76_RS15390	0.34	-1.4
3,224,213	+		BWI76_RS15390	0.36	-1.3
3,224,213	+		BWI76_RS15390	0.36	-0.0
3,224,221	-		BWI76_RS15390	0.36	+1.3
3,224,235	-		BWI76_RS15390	0.38	+0.7
3,224,250	-		BWI76_RS15390	0.39	+0.1
3,224,263	+		BWI76_RS15390	0.40	+0.5