Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01840 and BWI76_RS01845 are separated by 98 nucleotides BWI76_RS01845 and BWI76_RS01850 are separated by 107 nucleotides
BWI76_RS01840: BWI76_RS01840 - maltose ABC transporter, ATPase component (MalK) <small>(from data)</small>, at 374,860 to 375,969
_RS01840
BWI76_RS01845: BWI76_RS01845 - maltoporin, at 376,068 to 377,354
_RS01845
BWI76_RS01850: BWI76_RS01850 - maltose operon protein MalM, at 377,462 to 378,394
_RS01850
Position (kb) 376
377
378 Strain fitness (log2 ratio) -2
-1
0
1 at 375.168 kb on - strand, within BWI76_RS01840 at 375.681 kb on + strand, within BWI76_RS01840 at 375.924 kb on + strand at 375.995 kb on + strand at 376.139 kb on + strand at 376.347 kb on - strand, within BWI76_RS01845 at 376.375 kb on + strand, within BWI76_RS01845 at 376.547 kb on - strand, within BWI76_RS01845 at 376.708 kb on + strand, within BWI76_RS01845 at 376.708 kb on + strand, within BWI76_RS01845 at 376.733 kb on - strand, within BWI76_RS01845 at 376.786 kb on + strand, within BWI76_RS01845 at 376.932 kb on + strand, within BWI76_RS01845 at 377.030 kb on + strand, within BWI76_RS01845 at 377.195 kb on - strand, within BWI76_RS01845 at 377.487 kb on + strand at 377.608 kb on + strand, within BWI76_RS01850 at 377.782 kb on - strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 378.006 kb on - strand, within BWI76_RS01850 at 378.093 kb on + strand, within BWI76_RS01850 at 378.108 kb on + strand, within BWI76_RS01850
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 375,168 - BWI76_RS01840 0.28 +0.2 375,681 + BWI76_RS01840 0.74 +0.3 375,924 + +0.2 375,995 + -0.4 376,139 + -1.3 376,347 - BWI76_RS01845 0.22 -1.6 376,375 + BWI76_RS01845 0.24 -0.8 376,547 - BWI76_RS01845 0.37 -1.4 376,708 + BWI76_RS01845 0.50 -0.4 376,708 + BWI76_RS01845 0.50 -0.4 376,733 - BWI76_RS01845 0.52 -0.4 376,786 + BWI76_RS01845 0.56 -2.0 376,932 + BWI76_RS01845 0.67 -0.2 377,030 + BWI76_RS01845 0.75 -0.8 377,195 - BWI76_RS01845 0.88 -0.0 377,487 + +0.3 377,608 + BWI76_RS01850 0.16 +0.1 377,782 - BWI76_RS01850 0.34 -1.0 377,998 + BWI76_RS01850 0.57 -0.2 377,998 + BWI76_RS01850 0.57 -0.1 377,998 + BWI76_RS01850 0.57 +0.1 378,006 - BWI76_RS01850 0.58 +0.3 378,093 + BWI76_RS01850 0.68 +0.2 378,108 + BWI76_RS01850 0.69 -0.2
Or see this region's nucleotide sequence