Experiment: D-Leucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21175 and SM_b21176 are separated by 171 nucleotides SM_b21176 and SM_b21177 are separated by 91 nucleotides
SM_b21175: SM_b21175 - phosphate uptake ABC transporter permease, at 921,140 to 922,102
_b21175
SM_b21176: SM_b21176 - phosphate uptake ABC transporter substrate-binding protein precursor, at 922,274 to 923,179
_b21176
SM_b21177: SM_b21177 - phosphate uptake ABC transporter ATP-binding protein, at 923,271 to 924,110
_b21177
Position (kb) 922
923
924 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 921.366 kb on + strand, within SM_b21175 at 921.756 kb on + strand, within SM_b21175 at 921.786 kb on + strand, within SM_b21175 at 921.811 kb on - strand, within SM_b21175 at 922.011 kb on + strand at 922.085 kb on - strand at 922.476 kb on - strand, within SM_b21176 at 922.796 kb on - strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.900 kb on - strand, within SM_b21176 at 922.978 kb on - strand, within SM_b21176 at 923.173 kb on + strand at 923.390 kb on - strand, within SM_b21177 at 923.390 kb on - strand, within SM_b21177 at 923.479 kb on + strand, within SM_b21177 at 923.479 kb on + strand, within SM_b21177 at 923.480 kb on - strand, within SM_b21177 at 923.501 kb on + strand, within SM_b21177 at 923.502 kb on - strand, within SM_b21177 at 923.781 kb on + strand, within SM_b21177 at 923.922 kb on + strand, within SM_b21177 at 923.923 kb on - strand, within SM_b21177 at 923.971 kb on - strand, within SM_b21177 at 924.014 kb on + strand, within SM_b21177 at 924.014 kb on + strand, within SM_b21177 at 924.040 kb on - strand at 924.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Leucrose (C) remove 921,366 + SM_b21175 0.23 -4.4 921,756 + SM_b21175 0.64 -5.0 921,786 + SM_b21175 0.67 -2.0 921,811 - SM_b21175 0.70 -3.9 922,011 + -6.9 922,085 - -3.5 922,476 - SM_b21176 0.22 -3.3 922,796 - SM_b21176 0.58 -3.3 922,899 + SM_b21176 0.69 +0.2 922,899 + SM_b21176 0.69 -2.4 922,899 + SM_b21176 0.69 -3.0 922,900 - SM_b21176 0.69 -2.5 922,978 - SM_b21176 0.78 -0.5 923,173 + -3.5 923,390 - SM_b21177 0.14 -1.6 923,390 - SM_b21177 0.14 -2.5 923,479 + SM_b21177 0.25 -3.7 923,479 + SM_b21177 0.25 -2.7 923,480 - SM_b21177 0.25 -2.5 923,501 + SM_b21177 0.27 -0.8 923,502 - SM_b21177 0.28 -4.5 923,781 + SM_b21177 0.61 -3.0 923,922 + SM_b21177 0.78 -0.8 923,923 - SM_b21177 0.78 -4.1 923,971 - SM_b21177 0.83 -0.2 924,014 + SM_b21177 0.88 +0.2 924,014 + SM_b21177 0.88 -1.3 924,040 - -4.9 924,091 - -0.8
Or see this region's nucleotide sequence