Experiment: D-Leucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20568 and SM_b20569 are separated by 139 nucleotides SM_b20569 and SM_b20570 are separated by 10 nucleotides SM_b20570 and SM_b20571 are separated by 96 nucleotides SM_b20571 and SM_b21691 are separated by 16 nucleotides
SM_b20568: SM_b20568 - amino acid ABC transporter substrate-binding protein, at 1,580,560 to 1,581,771
_b20568
SM_b20569: SM_b20569 - ABC transporter ATP-binding protein, at 1,581,911 to 1,582,681
_b20569
SM_b20570: SM_b20570 - aliphatic sulfonate ABC transporter substrate-binding protein, at 1,582,692 to 1,583,684
_b20570
SM_b20571: SM_b20571 - aliphatic sulfonate ABC transporter permease, at 1,583,781 to 1,584,626
_b20571
SM_b21691: SM_b21691 - nitrilotriacetate monooxygenase subunit A, at 1,584,643 to 1,585,992
_b21691
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-1
0
1
2 at 1581.731 kb on + strand at 1581.732 kb on - strand at 1581.783 kb on - strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.843 kb on + strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.844 kb on - strand at 1581.912 kb on + strand at 1581.913 kb on - strand at 1582.038 kb on - strand, within SM_b20569 at 1582.059 kb on + strand, within SM_b20569 at 1582.059 kb on + strand, within SM_b20569 at 1582.059 kb on + strand, within SM_b20569 at 1582.060 kb on - strand, within SM_b20569 at 1582.060 kb on - strand, within SM_b20569 at 1582.060 kb on - strand, within SM_b20569 at 1582.205 kb on + strand, within SM_b20569 at 1582.254 kb on - strand, within SM_b20569 at 1582.305 kb on + strand, within SM_b20569 at 1582.305 kb on + strand, within SM_b20569 at 1582.306 kb on - strand, within SM_b20569 at 1582.306 kb on - strand, within SM_b20569 at 1582.590 kb on - strand, within SM_b20569 at 1582.747 kb on + strand at 1582.748 kb on - strand at 1582.748 kb on - strand at 1582.748 kb on - strand at 1582.748 kb on - strand at 1582.892 kb on + strand, within SM_b20570 at 1582.892 kb on + strand, within SM_b20570 at 1582.962 kb on + strand, within SM_b20570 at 1582.962 kb on + strand, within SM_b20570 at 1582.963 kb on - strand, within SM_b20570 at 1583.243 kb on - strand, within SM_b20570 at 1583.264 kb on + strand, within SM_b20570 at 1583.264 kb on + strand, within SM_b20570 at 1583.283 kb on - strand, within SM_b20570 at 1583.329 kb on + strand, within SM_b20570 at 1583.330 kb on - strand, within SM_b20570 at 1583.330 kb on - strand, within SM_b20570 at 1583.543 kb on - strand, within SM_b20570 at 1583.777 kb on - strand at 1583.905 kb on + strand, within SM_b20571 at 1583.905 kb on + strand, within SM_b20571 at 1584.073 kb on + strand, within SM_b20571 at 1584.312 kb on + strand, within SM_b20571 at 1584.313 kb on - strand, within SM_b20571 at 1584.314 kb on + strand, within SM_b20571 at 1584.315 kb on - strand, within SM_b20571 at 1584.334 kb on - strand, within SM_b20571 at 1584.557 kb on - strand at 1584.645 kb on - strand at 1584.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Leucrose (C) remove 1,581,731 + -0.6 1,581,732 - -0.1 1,581,783 - +0.4 1,581,843 + -0.8 1,581,843 + +0.1 1,581,843 + -0.5 1,581,843 + -0.7 1,581,843 + +1.8 1,581,843 + +0.1 1,581,843 + +0.2 1,581,844 - -0.5 1,581,844 - +0.4 1,581,844 - +1.1 1,581,844 - +0.0 1,581,844 - -0.4 1,581,844 - +0.2 1,581,844 - +0.5 1,581,844 - -0.2 1,581,844 - +0.0 1,581,844 - -0.3 1,581,844 - +0.9 1,581,912 + -0.2 1,581,913 - +0.0 1,582,038 - SM_b20569 0.16 -0.6 1,582,059 + SM_b20569 0.19 +0.1 1,582,059 + SM_b20569 0.19 -0.2 1,582,059 + SM_b20569 0.19 -0.4 1,582,060 - SM_b20569 0.19 -0.9 1,582,060 - SM_b20569 0.19 +0.5 1,582,060 - SM_b20569 0.19 -0.5 1,582,205 + SM_b20569 0.38 +1.5 1,582,254 - SM_b20569 0.44 -0.6 1,582,305 + SM_b20569 0.51 -0.3 1,582,305 + SM_b20569 0.51 -0.9 1,582,306 - SM_b20569 0.51 +0.2 1,582,306 - SM_b20569 0.51 -0.9 1,582,590 - SM_b20569 0.88 +0.4 1,582,747 + +0.3 1,582,748 - -0.3 1,582,748 - +1.8 1,582,748 - -0.1 1,582,748 - -0.4 1,582,892 + SM_b20570 0.20 -0.7 1,582,892 + SM_b20570 0.20 -1.6 1,582,962 + SM_b20570 0.27 -1.0 1,582,962 + SM_b20570 0.27 -0.5 1,582,963 - SM_b20570 0.27 -1.6 1,583,243 - SM_b20570 0.55 -1.0 1,583,264 + SM_b20570 0.58 -0.4 1,583,264 + SM_b20570 0.58 -0.7 1,583,283 - SM_b20570 0.60 -0.8 1,583,329 + SM_b20570 0.64 -1.2 1,583,330 - SM_b20570 0.64 -0.2 1,583,330 - SM_b20570 0.64 -0.6 1,583,543 - SM_b20570 0.86 -0.3 1,583,777 - +0.2 1,583,905 + SM_b20571 0.15 -0.3 1,583,905 + SM_b20571 0.15 -0.5 1,584,073 + SM_b20571 0.35 +0.3 1,584,312 + SM_b20571 0.63 +0.2 1,584,313 - SM_b20571 0.63 -1.0 1,584,314 + SM_b20571 0.63 -0.1 1,584,315 - SM_b20571 0.63 -0.5 1,584,334 - SM_b20571 0.65 -1.6 1,584,557 - -0.3 1,584,645 - -0.5 1,584,645 - -0.0
Or see this region's nucleotide sequence