Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21065

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
4,405,483	+				+1.2
4,405,483	+				+0.3
4,405,486	-				-0.3
4,405,507	-		BWI76_RS21055	0.12	-0.1
4,405,509	+		BWI76_RS21055	0.13	+0.1
4,405,524	+		BWI76_RS21055	0.17	+3.1
4,405,552	+		BWI76_RS21055	0.24	-3.6
4,405,555	-		BWI76_RS21055	0.24	+0.2
4,405,590	+		BWI76_RS21055	0.33	+0.0
4,405,595	+		BWI76_RS21055	0.35	+1.3
4,405,600	+		BWI76_RS21055	0.36	-0.2
4,405,604	+		BWI76_RS21055	0.37	-2.3
4,405,608	-		BWI76_RS21055	0.38	-0.5
4,405,612	-		BWI76_RS21055	0.39	+1.1
4,405,672	-		BWI76_RS21055	0.54	-1.2
4,405,700	+		BWI76_RS21055	0.61	-0.1
4,405,708	-		BWI76_RS21055	0.63	+0.1
4,405,753	+		BWI76_RS21055	0.75	-0.7
4,405,761	-		BWI76_RS21055	0.77	+0.4
4,405,769	-		BWI76_RS21055	0.79	+0.2
4,405,787	+		BWI76_RS21055	0.83	+0.2
4,405,795	-		BWI76_RS21055	0.85	-0.1
4,405,797	+		BWI76_RS21055	0.86	+0.5
4,405,797	+		BWI76_RS21055	0.86	+0.6
4,405,797	+		BWI76_RS21055	0.86	+0.5
4,405,880	+				-0.6
4,405,886	+				-0.3
4,405,900	+				+0.7
4,405,908	-				+2.2
4,405,931	+				-0.7
4,405,931	+				+0.8
4,405,931	+				-0.9
4,405,934	-				-0.1
4,405,939	-				+0.4
4,405,939	-				+0.3
4,405,939	-				-0.2
4,405,939	-				-0.7
4,405,939	-				-3.1
4,405,939	-				+1.5
4,405,939	-				+0.1
4,405,939	-				+1.1
4,405,939	-				+0.2
4,405,939	-				-0.2
4,405,959	-		BWI76_RS21060	0.13	-0.5
4,405,959	-		BWI76_RS21060	0.13	-1.9
4,405,966	+		BWI76_RS21060	0.15	-0.8
4,405,966	+		BWI76_RS21060	0.15	-0.3
4,405,966	+		BWI76_RS21060	0.15	+0.6
4,405,966	+		BWI76_RS21060	0.15	-0.3
4,405,971	+		BWI76_RS21060	0.16	+1.1
4,405,974	-		BWI76_RS21060	0.17	-0.9
4,405,974	-		BWI76_RS21060	0.17	+0.4
4,405,981	+		BWI76_RS21060	0.19	-0.2
4,405,994	-		BWI76_RS21060	0.22	+1.1
4,406,023	+		BWI76_RS21060	0.30	+1.1
4,406,023	-		BWI76_RS21060	0.30	-0.2
4,406,030	-		BWI76_RS21060	0.32	-0.2
4,406,066	-		BWI76_RS21060	0.41	-1.2
4,406,080	+		BWI76_RS21060	0.45	-0.6
4,406,089	+		BWI76_RS21060	0.47	+2.4
4,406,126	+		BWI76_RS21060	0.57	+0.7
4,406,148	+		BWI76_RS21060	0.63	-1.1
4,406,148	+		BWI76_RS21060	0.63	-0.5
4,406,153	+		BWI76_RS21060	0.64	-0.5
4,406,153	+		BWI76_RS21060	0.64	-2.1
4,406,153	+		BWI76_RS21060	0.64	-0.0
4,406,161	-		BWI76_RS21060	0.66	-0.3
4,406,203	-		BWI76_RS21060	0.78	-1.9
4,406,207	-		BWI76_RS21060	0.79	-2.8
4,406,207	-				-0.5
4,406,207	-		BWI76_RS21060	0.79	-0.0
4,406,207	-		BWI76_RS21060	0.79	-1.9
4,406,210	+		BWI76_RS21060	0.79	-3.1
4,406,220	-		BWI76_RS21060	0.82	+0.5
4,406,220	-		BWI76_RS21060	0.82	-1.3
4,406,235	+		BWI76_RS21060	0.86	-0.5
4,406,235	+		BWI76_RS21060	0.86	-2.5
4,406,240	+		BWI76_RS21060	0.87	+1.5
4,406,240	+		BWI76_RS21060	0.87	-0.2
4,406,248	-		BWI76_RS21060	0.89	-2.6
4,406,256	-				-2.6
4,406,256	-				-0.4
4,406,294	-				+0.5
4,406,294	-				+0.7
4,408,334	-		BWI76_RS21070	0.25	-1.7
4,408,461	-		BWI76_RS21070	0.36	-0.9