Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12135

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,542,866	+				+1.3
2,543,010	-		BWI76_RS12115	0.41	-0.8
2,543,010	-		BWI76_RS12115	0.41	-0.9
2,543,015	-		BWI76_RS12115	0.43	+0.2
2,543,015	-		BWI76_RS12115	0.43	+0.1
2,543,107	-		BWI76_RS12115	0.88	+0.4
2,543,108	-		BWI76_RS12115	0.89	-0.9
2,543,311	+				-0.1
2,543,311	+				-0.1
2,543,311	+				-0.9
2,543,456	+		BWI76_RS12125	0.69	-1.6
2,543,490	-		BWI76_RS12125	0.85	-1.7
2,543,913	-				-1.1
2,543,927	+				-0.2
2,544,089	-		BWI76_RS12135	0.16	-1.2
2,544,253	+				+0.1
2,544,529	+		BWI76_RS12135	0.38	+0.3
2,544,604	+		BWI76_RS12135	0.42	-0.9
2,544,614	-		BWI76_RS12135	0.42	-0.6
2,544,890	-		BWI76_RS12135	0.56	-0.5
2,544,890	-		BWI76_RS12135	0.56	-0.3
2,545,115	+		BWI76_RS12135	0.68	-0.8
2,545,115	+		BWI76_RS12135	0.68	-1.8
2,545,327	+		BWI76_RS12135	0.78	+0.1
2,545,454	-		BWI76_RS12135	0.85	-2.8
2,545,507	-		BWI76_RS12135	0.87	-2.9
2,545,579	+				-3.0
2,545,580	+				+0.4
2,545,580	+				+0.5
2,545,588	-				-1.7
2,545,590	+				+0.3
2,545,590	+				+0.6
2,545,598	-				-1.2
2,545,603	-				-1.1
2,545,603	-				+0.3
2,545,603	-				-2.1
2,545,625	+				-0.4
2,545,625	+				-0.2
2,545,635	+				-0.3
2,545,672	+				-0.8
2,545,672	+				+0.1
2,545,672	+				+0.6
2,545,672	+				-2.4
2,545,680	-				-0.2
2,545,681	-				+1.4
2,545,681	-				-0.4
2,545,704	+				-0.8
2,545,709	+				-0.5
2,545,709	+				+0.4
2,545,714	+				+0.5
2,545,714	+				-0.4
2,545,714	+				-0.4
2,545,714	+				-1.3
2,545,714	+				-0.7
2,545,717	-				-2.8
2,545,722	-				-1.5
2,545,728	+				-0.6
2,545,733	+				+0.7
2,545,738	+				-1.2
2,545,738	+				+0.5
2,545,741	-				-1.7
2,545,741	-				-0.4
2,545,746	-				-1.9
2,545,786	+				-0.4
2,545,811	+				-1.1
2,545,814	-				-0.5
2,545,814	-				+0.2
2,545,819	-				-0.4
2,545,824	+				+0.5
2,545,832	-				+0.1
2,545,840	-				+0.2
2,545,886	+				+1.7
2,545,886	+				-0.4
2,545,894	-				+0.8
2,545,894	-				-0.1
2,545,894	-				+0.6
2,545,894	-				-0.8
2,545,894	-				-1.4
2,545,894	-				-0.9
2,545,894	-				+0.2
2,545,925	-				+0.7
2,545,930	-				-0.9
2,545,930	-				-1.2
2,545,930	-				-4.1