Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10240

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10235 and BWI76_RS10240 are separated by 189 nucleotidesBWI76_RS10240 and BWI76_RS10245 are separated by 317 nucleotides BWI76_RS10235: BWI76_RS10235 - hypothetical protein, at 2,167,576 to 2,167,875 _RS10235 BWI76_RS10240: BWI76_RS10240 - hypothetical protein, at 2,168,065 to 2,169,282 _RS10240 BWI76_RS10245: BWI76_RS10245 - aspartate aminotransferase, at 2,169,600 to 2,170,808 _RS10245 Position (kb) 2168 2169 2170Strain fitness (log2 ratio) -1 0 1at 2169.491 kb on + strandat 2169.584 kb on - strandat 2169.584 kb on - strandat 2169.781 kb on - strand, within BWI76_RS10245

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
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2,169,491 + -0.9
2,169,584 - +0.2
2,169,584 - +1.3
2,169,781 - BWI76_RS10245 0.15 -0.5

Or see this region's nucleotide sequence