Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06990

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
1,466,835	+				+0.3
1,466,978	-		BWI76_RS06985	0.26	+0.5
1,467,603	+				-1.6
1,467,852	+				+1.0
1,467,891	+		BWI76_RS06990	0.12	-0.7
1,467,933	+		BWI76_RS06990	0.14	-1.3
1,468,137	+		BWI76_RS06990	0.26	-0.3
1,468,161	+		BWI76_RS06990	0.27	+1.5
1,468,169	-		BWI76_RS06990	0.28	-1.2
1,468,530	+		BWI76_RS06990	0.48	+0.2
1,468,548	+		BWI76_RS06990	0.49	-0.0
1,468,662	+		BWI76_RS06990	0.55	-0.1
1,468,819	+		BWI76_RS06990	0.64	+1.7
1,468,844	-		BWI76_RS06990	0.66	+0.2
1,468,916	+		BWI76_RS06990	0.70	+0.2
1,469,058	+		BWI76_RS06990	0.78	-0.4
1,469,058	+		BWI76_RS06990	0.78	-0.5
1,469,139	+		BWI76_RS06990	0.82	-0.3
1,469,216	-		BWI76_RS06990	0.86	+1.0
1,469,224	+		BWI76_RS06990	0.87	-0.5
1,469,232	-		BWI76_RS06990	0.87	+0.0
1,469,284	-				-1.0
1,469,376	+				+0.1
1,469,381	+				-0.6
1,469,389	-				-2.5
1,469,389	-				+0.3
1,469,391	-				-0.4
1,469,391	-				-1.6
1,469,409	-				-0.0
1,469,412	-				+1.2
1,469,428	+				-0.5
1,469,518	-				-2.6
1,469,545	+				+0.5
1,469,587	-		BWI76_RS06995	0.15	-0.6
1,469,615	-		BWI76_RS06995	0.19	-1.8
1,469,633	+		BWI76_RS06995	0.21	-0.0
1,469,635	+		BWI76_RS06995	0.21	+0.1
1,469,678	-		BWI76_RS06995	0.27	+1.0
1,469,691	+		BWI76_RS06995	0.28	-0.1
1,469,719	-		BWI76_RS06995	0.32	+0.8
1,469,816	+		BWI76_RS06995	0.44	-2.5
1,469,816	+		BWI76_RS06995	0.44	-0.7
1,469,824	-		BWI76_RS06995	0.45	-1.5
1,469,824	-		BWI76_RS06995	0.45	-0.4
1,469,824	-		BWI76_RS06995	0.45	-0.0
1,469,824	-		BWI76_RS06995	0.45	-0.9
1,469,824	-		BWI76_RS06995	0.45	-1.3
1,469,824	-		BWI76_RS06995	0.45	-1.4
1,469,824	-		BWI76_RS06995	0.45	-0.6
1,469,834	-		BWI76_RS06995	0.47	-1.0
1,469,836	+		BWI76_RS06995	0.47	-0.0
1,469,844	-		BWI76_RS06995	0.48	-0.0
1,469,859	+		BWI76_RS06995	0.50	-2.2
1,469,869	+		BWI76_RS06995	0.51	-3.1
1,469,869	+		BWI76_RS06995	0.51	-0.1
1,469,869	+		BWI76_RS06995	0.51	-2.3
1,469,869	+		BWI76_RS06995	0.51	-0.6
1,469,875	+		BWI76_RS06995	0.52	-0.3
1,469,877	-		BWI76_RS06995	0.52	-1.6
1,469,877	-		BWI76_RS06995	0.52	-1.3
1,469,887	+		BWI76_RS06995	0.54	-0.6
1,469,932	+		BWI76_RS06995	0.59	-1.3
1,469,935	+		BWI76_RS06995	0.60	-0.8
1,469,943	-		BWI76_RS06995	0.61	-1.5
1,469,945	+		BWI76_RS06995	0.61	-1.7
1,469,945	+		BWI76_RS06995	0.61	+1.3
1,469,945	+		BWI76_RS06995	0.61	-1.0
1,469,945	-		BWI76_RS06995	0.61	-0.6
1,469,953	-		BWI76_RS06995	0.62	-0.3
1,469,962	+		BWI76_RS06995	0.63	-0.6
1,469,969	-		BWI76_RS06995	0.64	-2.5
1,469,971	+		BWI76_RS06995	0.64	+1.7
1,469,971	+		BWI76_RS06995	0.64	-0.2
1,469,972	-		BWI76_RS06995	0.64	-0.8
1,469,979	-		BWI76_RS06995	0.65	-2.6
1,469,979	-		BWI76_RS06995	0.65	+1.1
1,469,979	-		BWI76_RS06995	0.65	-0.3
1,469,979	-		BWI76_RS06995	0.65	-0.0
1,470,040	-		BWI76_RS06995	0.73	-1.3
1,470,041	-		BWI76_RS06995	0.73	-2.0
1,470,052	+		BWI76_RS06995	0.75	-0.1
1,470,052	+		BWI76_RS06995	0.75	-1.3
1,470,071	+		BWI76_RS06995	0.77	-2.8
1,470,082	+		BWI76_RS06995	0.79	-0.2
1,470,101	-		BWI76_RS06995	0.81	-0.0
1,470,102	-		BWI76_RS06995	0.81	-1.0
1,470,109	+		BWI76_RS06995	0.82	+0.1
1,470,109	+		BWI76_RS06995	0.82	+0.4
1,470,117	-		BWI76_RS06995	0.83	-0.6
1,470,202	+				+0.2
1,470,213	+				+3.3
1,470,215	-				-0.0
1,470,217	-				-0.0
1,470,218	+				-0.0
1,470,218	+				-1.8
1,470,218	+				-0.4
1,470,218	+				-0.9
1,470,218	+				-1.0
1,470,218	+				-0.7
1,470,218	+				+0.8
1,470,218	+				+1.0
1,470,223	+				-2.0
1,470,226	-				-1.3
1,470,228	+				-0.6
1,470,372	+				-0.0
1,470,377	+				-1.4
1,470,380	-				-1.0
1,470,382	+				-1.5
1,470,382	+				-1.8
1,470,382	+				+0.6
1,470,382	+				+0.9
1,470,401	+				-1.8
1,470,416	+				+0.2
1,470,424	-				-0.6
1,470,429	+				+0.1