Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05585

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
1,168,425	-		BWI76_RS05580	0.26	-0.3
1,168,549	-		BWI76_RS05580	0.36	+0.1
1,168,808	+		BWI76_RS05580	0.57	+1.1
1,168,918	+		BWI76_RS05580	0.66	+1.9
1,168,978	+		BWI76_RS05580	0.71	-0.6
1,168,998	+		BWI76_RS05580	0.73	+0.6
1,169,078	+		BWI76_RS05580	0.80	+1.5
1,169,114	+		BWI76_RS05580	0.83	-0.1
1,169,122	-		BWI76_RS05580	0.83	+1.3
1,169,151	+		BWI76_RS05580	0.86	-0.3
1,169,151	+		BWI76_RS05580	0.86	-0.1
1,169,159	-		BWI76_RS05580	0.86	+0.9
1,169,180	-		BWI76_RS05580	0.88	+0.5
1,169,188	+				-0.9
1,169,226	+				+1.1
1,169,234	-				+0.3
1,169,234	-				+0.2
1,169,235	-				-2.4
1,169,235	-				+1.3
1,169,239	+				-1.5
1,169,355	-				-1.1
1,169,356	-				-3.2
1,169,364	-				-0.8
1,169,374	-				+0.2
1,169,393	+				+0.4
1,169,395	+				+3.0
1,169,399	-				+0.4
1,169,401	-				+1.1
1,169,401	-				+0.0
1,169,401	-				-3.3
1,169,410	-		BWI76_RS05585	0.10	-0.4
1,169,416	-		BWI76_RS05585	0.11	-2.4
1,169,416	-		BWI76_RS05585	0.11	+0.1
1,169,416	-		BWI76_RS05585	0.11	-0.5
1,169,416	-		BWI76_RS05585	0.11	-0.2
1,169,416	-		BWI76_RS05585	0.11	-0.2
1,169,447	+		BWI76_RS05585	0.14	-1.7
1,169,454	-		BWI76_RS05585	0.14	+0.8
1,169,455	-		BWI76_RS05585	0.15	-0.7
1,169,455	-		BWI76_RS05585	0.15	-1.9
1,169,490	-		BWI76_RS05585	0.18	-1.4
1,169,505	+		BWI76_RS05585	0.19	-1.3
1,169,568	+		BWI76_RS05585	0.26	+1.1
1,169,593	-		BWI76_RS05585	0.28	-1.5
1,169,632	+		BWI76_RS05585	0.32	-0.0
1,169,653	+		BWI76_RS05585	0.34	-1.3
1,169,713	+		BWI76_RS05585	0.40	+0.2
1,169,726	-		BWI76_RS05585	0.41	-0.5
1,169,800	-		BWI76_RS05585	0.48	-0.2
1,169,803	+		BWI76_RS05585	0.48	-0.9
1,169,811	-		BWI76_RS05585	0.49	+0.3
1,169,826	-		BWI76_RS05585	0.51	+1.1
1,169,826	-		BWI76_RS05585	0.51	+0.1
1,169,826	-		BWI76_RS05585	0.51	+1.3
1,169,861	+		BWI76_RS05585	0.54	+1.6
1,169,892	+		BWI76_RS05585	0.57	-0.3
1,169,900	-		BWI76_RS05585	0.58	-1.7
1,169,963	-		BWI76_RS05585	0.64	-3.4
1,170,022	-		BWI76_RS05585	0.70	-1.5
1,170,109	+		BWI76_RS05585	0.78	-1.1
1,170,228	+		BWI76_RS05585	0.90	+0.1
1,170,228	+		BWI76_RS05585	0.90	+1.1
1,170,236	-				+0.7
1,170,275	+				+0.3
1,170,438	+				-1.3
1,170,440	+				+1.1
1,170,448	-				-0.7
1,170,448	-				+1.1
1,170,490	+		BWI76_RS05590	0.12	-1.2
1,170,490	+		BWI76_RS05590	0.12	+0.8
1,170,490	+		BWI76_RS05590	0.12	+0.5
1,170,498	-		BWI76_RS05590	0.13	+1.1
1,170,516	+		BWI76_RS05590	0.14	+1.9
1,170,524	-		BWI76_RS05590	0.14	-0.6
1,170,545	-		BWI76_RS05590	0.16	-0.5
1,170,571	-		BWI76_RS05590	0.18	-1.2
1,170,571	-		BWI76_RS05590	0.18	-2.5
1,170,571	-		BWI76_RS05590	0.18	-0.9
1,170,653	+		BWI76_RS05590	0.24	-0.6
1,170,669	+		BWI76_RS05590	0.25	+0.4
1,170,715	-		BWI76_RS05590	0.28	+0.1
1,170,996	+		BWI76_RS05590	0.49	-0.5
1,171,020	-		BWI76_RS05590	0.50	+0.0
1,171,020	-		BWI76_RS05590	0.50	-1.2
1,171,165	-		BWI76_RS05590	0.61	+0.8