Experiment: palatinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21100 and SM_b21101 are separated by 257 nucleotides SM_b21101 and SM_b21102 are separated by 50 nucleotides
SM_b21100: SM_b21100 - polysaccharide deacetylase, at 742,000 to 742,878
_b21100
SM_b21101: SM_b21101 - L-fucono-1,5-lactonase; D-arabinolactonase <small>(from data)</small>, at 743,136 to 743,972
_b21101
SM_b21102: SM_b21102 - transcriptional regulator, at 744,023 to 744,805
_b21102
Position (kb) 743
744 Strain fitness (log2 ratio) -2
-1
0
1 at 742.178 kb on - strand, within SM_b21100 at 742.291 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.887 kb on - strand at 742.915 kb on + strand at 742.945 kb on + strand at 742.946 kb on - strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.977 kb on - strand at 743.061 kb on + strand at 743.061 kb on + strand at 743.061 kb on + strand at 743.134 kb on + strand at 743.134 kb on + strand at 743.135 kb on - strand at 743.327 kb on - strand, within SM_b21101 at 743.327 kb on - strand, within SM_b21101 at 743.366 kb on - strand, within SM_b21101 at 743.423 kb on + strand, within SM_b21101 at 743.424 kb on - strand, within SM_b21101 at 743.457 kb on + strand, within SM_b21101 at 743.457 kb on + strand, within SM_b21101 at 743.458 kb on - strand, within SM_b21101 at 743.458 kb on - strand, within SM_b21101 at 743.522 kb on + strand, within SM_b21101 at 743.522 kb on + strand, within SM_b21101 at 743.693 kb on - strand, within SM_b21101 at 743.826 kb on - strand, within SM_b21101 at 743.869 kb on + strand, within SM_b21101 at 743.878 kb on + strand, within SM_b21101 at 743.923 kb on + strand at 743.924 kb on - strand at 744.136 kb on + strand, within SM_b21102 at 744.136 kb on + strand, within SM_b21102 at 744.136 kb on + strand, within SM_b21102 at 744.136 kb on + strand, within SM_b21102 at 744.136 kb on + strand, within SM_b21102 at 744.137 kb on - strand, within SM_b21102 at 744.137 kb on - strand, within SM_b21102 at 744.137 kb on - strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.138 kb on + strand, within SM_b21102 at 744.201 kb on + strand, within SM_b21102 at 744.202 kb on - strand, within SM_b21102 at 744.202 kb on - strand, within SM_b21102 at 744.202 kb on - strand, within SM_b21102 at 744.238 kb on - strand, within SM_b21102 at 744.270 kb on + strand, within SM_b21102 at 744.270 kb on + strand, within SM_b21102 at 744.271 kb on - strand, within SM_b21102 at 744.395 kb on - strand, within SM_b21102 at 744.603 kb on + strand, within SM_b21102 at 744.630 kb on + strand, within SM_b21102 at 744.630 kb on + strand, within SM_b21102 at 744.631 kb on - strand, within SM_b21102 at 744.970 kb on - strand at 744.970 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction palatinose (C) remove 742,178 - SM_b21100 0.20 -2.0 742,291 - SM_b21100 0.33 +0.6 742,478 - SM_b21100 0.54 -0.2 742,478 - SM_b21100 0.54 +0.1 742,887 - +0.4 742,915 + -0.1 742,945 + -0.0 742,946 - +1.2 742,976 + -0.0 742,976 + -0.5 742,976 + -0.7 742,977 - +0.4 743,061 + -1.1 743,061 + -0.1 743,061 + +0.3 743,134 + -0.5 743,134 + +0.8 743,135 - +0.1 743,327 - SM_b21101 0.23 -0.2 743,327 - SM_b21101 0.23 -1.4 743,366 - SM_b21101 0.27 +1.6 743,423 + SM_b21101 0.34 -0.3 743,424 - SM_b21101 0.34 +0.0 743,457 + SM_b21101 0.38 -0.6 743,457 + SM_b21101 0.38 -0.6 743,458 - SM_b21101 0.38 +0.0 743,458 - SM_b21101 0.38 -0.3 743,522 + SM_b21101 0.46 -0.3 743,522 + SM_b21101 0.46 +0.5 743,693 - SM_b21101 0.67 -0.8 743,826 - SM_b21101 0.82 -0.5 743,869 + SM_b21101 0.88 -0.7 743,878 + SM_b21101 0.89 +0.0 743,923 + +1.0 743,924 - +0.8 744,136 + SM_b21102 0.14 -1.6 744,136 + SM_b21102 0.14 -0.2 744,136 + SM_b21102 0.14 -1.5 744,136 + SM_b21102 0.14 -2.5 744,136 + SM_b21102 0.14 +0.0 744,137 - SM_b21102 0.15 -0.5 744,137 - SM_b21102 0.15 -0.8 744,137 - SM_b21102 0.15 +1.1 744,138 + SM_b21102 0.15 +0.9 744,138 + SM_b21102 0.15 -0.7 744,138 + SM_b21102 0.15 -1.1 744,138 + SM_b21102 0.15 +0.1 744,138 + SM_b21102 0.15 -0.2 744,138 + SM_b21102 0.15 -0.4 744,201 + SM_b21102 0.23 -0.8 744,202 - SM_b21102 0.23 -1.1 744,202 - SM_b21102 0.23 +0.5 744,202 - SM_b21102 0.23 +0.0 744,238 - SM_b21102 0.27 -1.2 744,270 + SM_b21102 0.32 -0.6 744,270 + SM_b21102 0.32 +0.6 744,271 - SM_b21102 0.32 -0.8 744,395 - SM_b21102 0.48 +0.1 744,603 + SM_b21102 0.74 -0.5 744,630 + SM_b21102 0.78 +0.3 744,630 + SM_b21102 0.78 -2.4 744,631 - SM_b21102 0.78 +0.1 744,970 - -0.2 744,970 - +0.1
Or see this region's nucleotide sequence