Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24420

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
5,090,020	-				+0.6
5,090,020	-				-1.8
5,090,057	+				-2.5
5,090,065	-				-0.2
5,090,065	-				-0.5
5,090,065	-				+0.7
5,090,069	-				-2.0
5,090,088	-				+2.3
5,090,097	-				-1.6
5,090,139	+				-0.2
5,090,147	-				+1.0
5,090,181	+				+0.3
5,090,181	+				-0.0
5,090,181	+				+0.4
5,090,181	+				-4.0
5,090,181	+				-3.3
5,090,181	+				-1.6
5,090,181	+				+0.6
5,090,181	+				-0.9
5,090,181	+				+1.0
5,090,181	+				-3.5
5,090,181	+				+0.3
5,090,181	+				+0.2
5,090,181	+				-1.3
5,090,181	+				-1.3
5,090,181	+				-0.3
5,090,181	+				+1.6
5,090,186	+				-2.7
5,090,189	-				-0.9
5,090,189	-				+0.4
5,090,189	-				-0.8
5,090,189	-				-0.0
5,090,189	-				-1.3
5,090,189	-				-2.3
5,090,189	-				-3.5
5,090,189	-				+0.5
5,090,189	-				-3.7
5,090,189	-				+0.2
5,090,189	-				-1.6
5,090,189	-				-0.5
5,090,189	-				-2.9
5,090,189	-				-3.1
5,090,189	-				+1.0
5,090,194	-				-2.5
5,090,194	-				-0.0
5,090,212	-				+2.2
5,090,228	-				-0.8
5,090,248	-				+0.4
5,090,249	-				-0.2
5,090,264	-				-1.7
5,090,288	-				-0.0
5,090,301	-				-2.5
5,090,312	+				+1.3
5,090,320	-				-1.3
5,090,320	-				-1.0
5,090,417	+				-0.0
5,090,420	-				-1.0
5,090,425	-				-2.0
5,090,425	-				+0.7
5,090,425	-				+1.0
5,090,425	-				-0.9
5,090,486	+				-0.3
5,090,493	+				-2.6
5,090,493	+				-0.6
5,090,495	-				-0.0
5,090,501	-				+0.1
5,090,501	-				+1.8
5,090,501	-				+0.6
5,090,501	-				+1.0
5,090,765	-				+3.2
5,090,838	+				-3.0
5,090,838	+				-0.0
5,090,838	+				+2.6
5,090,970	+				+1.4
5,091,004	-				+1.0
5,091,004	-				-1.0
5,091,014	-				+1.0
5,091,053	-		BWI76_RS24420	0.15	-1.8
5,091,087	+		BWI76_RS24420	0.21	+1.0
5,091,087	+		BWI76_RS24420	0.21	-0.0
5,091,092	+		BWI76_RS24420	0.22	-0.3
5,091,142	+				-0.0
5,091,193	+		BWI76_RS24420	0.40	-1.3
5,091,206	+		BWI76_RS24420	0.42	-1.3
5,091,216	+		BWI76_RS24420	0.44	+0.9
5,091,216	+		BWI76_RS24420	0.44	-3.2
5,091,216	+		BWI76_RS24420	0.44	+1.0
5,091,216	+		BWI76_RS24420	0.44	-0.0
5,091,216	+		BWI76_RS24420	0.44	+1.3
5,091,219	-		BWI76_RS24420	0.44	+0.6
5,091,219	-		BWI76_RS24420	0.44	+4.8
5,091,224	-		BWI76_RS24420	0.45	+4.6
5,091,224	-				+1.0
5,091,224	-				+1.0
5,091,224	-		BWI76_RS24420	0.45	-1.0
5,091,224	-		BWI76_RS24420	0.45	-1.0
5,091,224	-		BWI76_RS24420	0.45	-1.5
5,091,268	+		BWI76_RS24420	0.53	+0.5
5,091,278	+		BWI76_RS24420	0.55	+1.8
5,091,284	+		BWI76_RS24420	0.56	-0.6
5,091,284	+		BWI76_RS24420	0.56	-2.3
5,091,286	-		BWI76_RS24420	0.56	+1.0
5,091,299	+		BWI76_RS24420	0.58	-1.0
5,091,299	+		BWI76_RS24420	0.58	-1.0
5,091,302	-		BWI76_RS24420	0.59	-0.6
5,091,304	+		BWI76_RS24420	0.59	-1.3
5,091,304	+		BWI76_RS24420	0.59	-0.5
5,091,312	+		BWI76_RS24420	0.61	+0.7
5,091,320	-		BWI76_RS24420	0.62	-0.6
5,091,344	+		BWI76_RS24420	0.66	-2.0
5,091,350	+		BWI76_RS24420	0.67	-0.6
5,091,352	-		BWI76_RS24420	0.68	+1.7
5,091,366	+		BWI76_RS24420	0.70	-0.7
5,091,376	+		BWI76_RS24420	0.72	+0.5
5,091,376	+		BWI76_RS24420	0.72	-4.8
5,091,376	+		BWI76_RS24420	0.72	-1.1
5,091,376	+		BWI76_RS24420	0.72	-0.8
5,091,376	+		BWI76_RS24420	0.72	-0.6
5,091,376	+		BWI76_RS24420	0.72	+0.1
5,091,377	-		BWI76_RS24420	0.72	-2.8
5,091,384	-		BWI76_RS24420	0.73	-1.3
5,091,384	-		BWI76_RS24420	0.73	-0.6
5,091,384	-		BWI76_RS24420	0.73	-1.0
5,091,386	+		BWI76_RS24420	0.73	+0.2
5,091,386	+		BWI76_RS24420	0.73	-0.9
5,091,386	+		BWI76_RS24420	0.73	-0.0
5,091,386	+		BWI76_RS24420	0.73	+1.0
5,091,386	+		BWI76_RS24420	0.73	-0.4
5,091,386	+		BWI76_RS24420	0.73	+0.9
5,091,386	+		BWI76_RS24420	0.73	-2.9
5,091,386	+		BWI76_RS24420	0.73	-1.0
5,091,386	+		BWI76_RS24420	0.73	-2.8
5,091,386	+		BWI76_RS24420	0.73	+1.2
5,091,386	+		BWI76_RS24420	0.73	+0.6
5,091,386	+		BWI76_RS24420	0.73	-1.8
5,091,391	+		BWI76_RS24420	0.74	+1.5
5,091,391	+		BWI76_RS24420	0.74	-3.1
5,091,391	+		BWI76_RS24420	0.74	-1.3
5,091,391	+		BWI76_RS24420	0.74	-1.0
5,091,391	+				+1.0
5,091,394	-		BWI76_RS24420	0.75	-1.0
5,091,394	-		BWI76_RS24420	0.75	+0.1
5,091,394	-		BWI76_RS24420	0.75	+1.7
5,091,396	+		BWI76_RS24420	0.75	-3.5
5,091,399	-		BWI76_RS24420	0.76	+0.7
5,091,399	-		BWI76_RS24420	0.76	+0.0
5,091,399	-		BWI76_RS24420	0.76	-1.3
5,091,399	-		BWI76_RS24420	0.76	-1.3
5,091,401	+		BWI76_RS24420	0.76	+0.1
5,091,401	+		BWI76_RS24420	0.76	-0.9
5,091,401	+		BWI76_RS24420	0.76	-0.9
5,091,401	+		BWI76_RS24420	0.76	-0.2
5,091,401	+		BWI76_RS24420	0.76	-1.6
5,091,414	-		BWI76_RS24420	0.78	-0.1
5,091,416	+		BWI76_RS24420	0.79	-0.2
5,091,424	-		BWI76_RS24420	0.80	-1.3
5,091,424	-		BWI76_RS24420	0.80	-3.5
5,091,437	-		BWI76_RS24420	0.82	+1.6
5,091,458	+		BWI76_RS24420	0.86	-0.6
5,091,458	+		BWI76_RS24420	0.86	-2.0
5,091,458	-		BWI76_RS24420	0.86	-2.6
5,091,460	+		BWI76_RS24420	0.86	+0.6
5,091,460	+		BWI76_RS24420	0.86	+0.1
5,091,460	+		BWI76_RS24420	0.86	-1.0
5,091,460	+		BWI76_RS24420	0.86	-2.5
5,091,460	+		BWI76_RS24420	0.86	-1.6
5,091,460	+		BWI76_RS24420	0.86	+0.2
5,091,460	+		BWI76_RS24420	0.86	-2.7
5,091,460	+		BWI76_RS24420	0.86	+1.1
5,091,460	+		BWI76_RS24420	0.86	-0.1
5,091,460	+		BWI76_RS24420	0.86	-1.6
5,091,462	+		BWI76_RS24420	0.87	-0.5
5,091,491	+				+0.9
5,091,501	-				-0.6
5,091,506	-				+0.9
5,091,508	+				-0.0
5,091,510	+				-0.2
5,091,510	+				+1.4
5,091,514	+				+0.4
5,091,518	-				+1.5
5,091,519	+				+1.2
5,091,564	+				+0.5
5,091,564	+				+0.8
5,091,564	+				-0.0
5,091,564	+				+0.2
5,091,564	+				+0.4
5,091,581	-				+1.0
5,091,589	-				+1.6
5,091,644	-				-2.3
5,091,668	-				-0.0
5,091,807	+				-1.6
5,091,808	+				+1.3
5,091,820	+				+0.6
5,091,821	-				+1.1
5,091,832	-				+2.6
5,091,911	+		BWI76_RS24425	0.11	-2.2
5,091,911	+		BWI76_RS24425	0.11	+1.0
5,091,918	+		BWI76_RS24425	0.12	+0.2
5,091,918	+		BWI76_RS24425	0.12	-0.2
5,091,929	+		BWI76_RS24425	0.12	-0.0
5,091,929	+		BWI76_RS24425	0.12	+1.3
5,091,929	+		BWI76_RS24425	0.12	+1.0
5,091,937	-		BWI76_RS24425	0.12	-3.7
5,091,937	-		BWI76_RS24425	0.12	-2.0
5,091,965	+		BWI76_RS24425	0.13	-2.6
5,091,965	+		BWI76_RS24425	0.13	+0.6
5,091,973	-		BWI76_RS24425	0.14	-3.4
5,091,977	+		BWI76_RS24425	0.14	-3.8
5,091,977	+		BWI76_RS24425	0.14	-1.8
5,091,977	+		BWI76_RS24425	0.14	-1.3
5,091,984	+		BWI76_RS24425	0.14	-0.6
5,092,007	-		BWI76_RS24425	0.15	+0.3
5,092,017	-		BWI76_RS24425	0.16	-0.9
5,092,017	-		BWI76_RS24425	0.16	+1.6
5,092,022	+		BWI76_RS24425	0.16	-1.3
5,092,022	+		BWI76_RS24425	0.16	-0.2
5,092,022	+		BWI76_RS24425	0.16	-1.8
5,092,030	-		BWI76_RS24425	0.16	-3.3
5,092,030	-		BWI76_RS24425	0.16	-1.3
5,092,030	-		BWI76_RS24425	0.16	-2.9
5,092,030	-		BWI76_RS24425	0.16	-2.3
5,092,030	-		BWI76_RS24425	0.16	-1.5
5,092,039	+		BWI76_RS24425	0.16	+1.0
5,092,044	+		BWI76_RS24425	0.17	-0.4
5,092,047	-		BWI76_RS24425	0.17	-1.0
5,092,059	-		BWI76_RS24425	0.17	-1.8
5,092,060	+		BWI76_RS24425	0.17	+0.3
5,092,065	+		BWI76_RS24425	0.17	-1.6
5,092,065	+		BWI76_RS24425	0.17	-3.4
5,092,065	+		BWI76_RS24425	0.17	-2.8
5,092,067	+		BWI76_RS24425	0.17	+0.7
5,092,067	+		BWI76_RS24425	0.17	-2.6
5,092,068	-		BWI76_RS24425	0.18	+3.9
5,092,075	-		BWI76_RS24425	0.18	+1.4
5,092,075	-				-0.0
5,092,075	-		BWI76_RS24425	0.18	-1.0
5,092,086	-		BWI76_RS24425	0.18	+0.4
5,092,086	-		BWI76_RS24425	0.18	-0.0
5,092,087	+		BWI76_RS24425	0.18	+0.2
5,092,091	-		BWI76_RS24425	0.18	-0.6
5,092,125	+		BWI76_RS24425	0.20	+0.3
5,092,125	+		BWI76_RS24425	0.20	-0.0
5,092,125	+		BWI76_RS24425	0.20	-0.1
5,092,125	+		BWI76_RS24425	0.20	-0.8
5,092,167	+		BWI76_RS24425	0.21	-1.5
5,092,167	+		BWI76_RS24425	0.21	-1.8
5,092,186	+		BWI76_RS24425	0.22	+2.6
5,092,194	-		BWI76_RS24425	0.22	+1.0
5,092,194	-		BWI76_RS24425	0.22	-0.2
5,092,237	+		BWI76_RS24425	0.24	+1.3
5,092,276	-		BWI76_RS24425	0.26	+1.5
5,092,320	+		BWI76_RS24425	0.27	+0.4
5,092,344	+		BWI76_RS24425	0.28	-0.8
5,092,352	-		BWI76_RS24425	0.29	+1.0
5,092,362	-		BWI76_RS24425	0.29	-2.0
5,092,466	+		BWI76_RS24425	0.33	-1.8
5,092,466	+		BWI76_RS24425	0.33	+1.9
5,092,474	-		BWI76_RS24425	0.34	-0.4
5,092,524	+		BWI76_RS24425	0.36	-0.5