Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21900 and BWI76_RS21905 are separated by 0 nucleotides BWI76_RS21905 and BWI76_RS21910 are separated by 5 nucleotides
BWI76_RS21900: BWI76_RS21900 - amino acid ABC transporter permease/ATP-binding protein, at 4,576,005 to 4,577,525
_RS21900
BWI76_RS21905: BWI76_RS21905 - class II aldolase, at 4,577,526 to 4,578,254
_RS21905
BWI76_RS21910: BWI76_RS21910 - glyoxylate/hydroxypyruvate reductase A, at 4,578,260 to 4,579,192
_RS21910
Position (kb) 4577
4578
4579 Strain fitness (log2 ratio) -2
-1
0
1 at 4576.550 kb on + strand, within BWI76_RS21900 at 4576.584 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.690 kb on + strand, within BWI76_RS21900 at 4576.905 kb on + strand, within BWI76_RS21900 at 4577.012 kb on - strand, within BWI76_RS21900 at 4577.076 kb on + strand, within BWI76_RS21900 at 4577.115 kb on - strand, within BWI76_RS21900 at 4577.449 kb on - strand at 4577.723 kb on + strand, within BWI76_RS21905 at 4577.733 kb on + strand, within BWI76_RS21905 at 4577.741 kb on - strand, within BWI76_RS21905 at 4578.165 kb on - strand, within BWI76_RS21905 at 4578.167 kb on + strand, within BWI76_RS21905 at 4578.230 kb on + strand at 4578.296 kb on + strand at 4578.304 kb on - strand at 4578.342 kb on - strand at 4578.700 kb on + strand, within BWI76_RS21910 at 4578.843 kb on - strand, within BWI76_RS21910 at 4578.855 kb on - strand, within BWI76_RS21910 at 4579.229 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 4,576,550 + BWI76_RS21900 0.36 +0.3 4,576,584 - BWI76_RS21900 0.38 -2.4 4,576,648 - BWI76_RS21900 0.42 +0.3 4,576,648 - BWI76_RS21900 0.42 +0.5 4,576,690 + BWI76_RS21900 0.45 +0.5 4,576,905 + BWI76_RS21900 0.59 +1.0 4,577,012 - BWI76_RS21900 0.66 -0.8 4,577,076 + BWI76_RS21900 0.70 -0.6 4,577,115 - BWI76_RS21900 0.73 -1.4 4,577,449 - +0.1 4,577,723 + BWI76_RS21905 0.27 +0.7 4,577,733 + BWI76_RS21905 0.28 +1.7 4,577,741 - BWI76_RS21905 0.29 +0.5 4,578,165 - BWI76_RS21905 0.88 +1.0 4,578,167 + BWI76_RS21905 0.88 +0.4 4,578,230 + +1.4 4,578,296 + -0.8 4,578,304 - +1.2 4,578,342 - +0.5 4,578,700 + BWI76_RS21910 0.47 +0.8 4,578,843 - BWI76_RS21910 0.62 -0.1 4,578,855 - BWI76_RS21910 0.64 +0.1 4,579,229 + +0.3
Or see this region's nucleotide sequence