Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18750 and BWI76_RS18755 are separated by 39 nucleotides BWI76_RS18755 and BWI76_RS18760 are separated by 193 nucleotides BWI76_RS18760 and BWI76_RS18765 are separated by 168 nucleotides
BWI76_RS18750: BWI76_RS18750 - adenosylcobinamide-GDP ribazoletransferase, at 3,886,872 to 3,887,612
_RS18750
BWI76_RS18755: BWI76_RS18755 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 3,887,652 to 3,887,885
_RS18755
BWI76_RS18760: BWI76_RS18760 - hypothetical protein, at 3,888,079 to 3,888,414
_RS18760
BWI76_RS18765: BWI76_RS18765 - FUSC family protein, at 3,888,583 to 3,889,641
_RS18765
Position (kb) 3888
3889 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 3887.114 kb on - strand, within BWI76_RS18750 at 3887.695 kb on + strand, within BWI76_RS18755 at 3888.459 kb on + strand at 3888.776 kb on + strand, within BWI76_RS18765 at 3888.848 kb on - strand, within BWI76_RS18765 at 3888.914 kb on + strand, within BWI76_RS18765 at 3889.086 kb on + strand, within BWI76_RS18765 at 3889.189 kb on + strand, within BWI76_RS18765 at 3889.350 kb on - strand, within BWI76_RS18765
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,887,114 - BWI76_RS18750 0.33 -1.7 3,887,695 + BWI76_RS18755 0.18 -2.0 3,888,459 + -2.8 3,888,776 + BWI76_RS18765 0.18 +0.4 3,888,848 - BWI76_RS18765 0.25 -4.1 3,888,914 + BWI76_RS18765 0.31 -3.2 3,889,086 + BWI76_RS18765 0.47 -0.6 3,889,189 + BWI76_RS18765 0.57 +0.2 3,889,350 - BWI76_RS18765 0.72 +0.7
Or see this region's nucleotide sequence