Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11405

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,402,862	-		BWI76_RS11395	0.84	+0.5
2,402,882	+		BWI76_RS11395	0.87	-0.7
2,402,890	-		BWI76_RS11395	0.89	-0.8
2,402,925	-				+0.3
2,403,133	+				+0.1
2,403,155	+		BWI76_RS11400	0.18	-0.9
2,403,163	-		BWI76_RS11400	0.23	-0.1
2,403,165	-		BWI76_RS11400	0.24	+1.3
2,403,165	-		BWI76_RS11400	0.24	-1.4
2,403,188	+		BWI76_RS11400	0.39	-0.7
2,403,238	+		BWI76_RS11400	0.72	-4.5
2,403,238	+		BWI76_RS11400	0.72	+0.3
2,403,238	+		BWI76_RS11400	0.72	-2.2
2,403,238	+		BWI76_RS11400	0.72	+0.3
2,403,248	+		BWI76_RS11400	0.78	-1.4
2,403,350	+				-3.1
2,403,404	+				+0.9
2,403,412	-				-1.4
2,403,421	+				-3.9
2,403,451	+				-0.4
2,403,451	+				-2.5
2,403,461	+				-0.1
2,403,480	-				-0.4
2,403,487	+				-3.5
2,403,487	+				+1.9
2,403,487	+				-0.8
2,403,487	+				+0.9
2,403,488	+				-3.2
2,403,509	+				-1.1
2,403,521	+				-1.1
2,403,530	+				-2.4
2,403,537	-				-0.1
2,403,539	-				+1.3
2,403,545	+				-1.1
2,403,545	+				+0.9
2,403,545	+				+1.3
2,403,553	-				+0.4
2,403,555	+				-0.5
2,403,555	+				+0.9
2,403,736	+				-0.7
2,403,736	+				-1.4
2,403,738	+				-3.2
2,403,744	+				+0.9
2,403,746	-				+1.6
2,403,751	+				-0.5
2,403,751	+				-0.0
2,403,759	-				+0.5
2,403,759	-				+0.9
2,403,759	-				-0.1
2,403,759	-				+1.1
2,403,761	+				-0.1
2,403,779	-				+1.8
2,403,793	+				+0.9
2,403,795	-				-0.5
2,403,797	+				-0.1
2,403,799	+				+1.6
2,403,799	+				-0.1
2,403,799	+				-2.0
2,403,858	+				+2.7
2,403,875	+				-0.1
2,403,875	+				+0.2
2,403,875	+				+0.7
2,403,875	+				-1.4
2,403,875	+				+0.9
2,403,875	+				-0.1
2,403,875	+				-3.1
2,403,875	+				-0.1
2,403,880	+				-0.0
2,403,881	+				+1.3
2,403,883	-				+0.9
2,403,883	-				-0.1
2,403,883	-				-2.6
2,403,883	-				+2.5
2,403,883	-				+0.2
2,403,885	+				+1.7
2,403,886	+				-0.6
2,403,886	+				-0.3
2,403,886	+				-1.4
2,403,886	+				+0.7
2,403,886	+				+0.7
2,403,886	+				+1.8
2,403,886	+				+0.4
2,403,886	+				+0.4
2,403,886	+				+1.3
2,403,886	+				+0.3
2,403,886	+				+0.8
2,403,891	+				+1.0
2,403,893	-				-2.2
2,403,894	-				+0.9
2,403,896	+				+0.5
2,403,907	+				-3.0
2,403,912	+				-0.5
2,403,920	-		BWI76_RS11405	0.11	-1.7
2,403,920	-		BWI76_RS11405	0.11	-1.1
2,403,920	-		BWI76_RS11405	0.11	-1.2
2,403,942	-				+3.3
2,403,968	+		BWI76_RS11405	0.16	-1.0
2,404,084	-		BWI76_RS11405	0.29	-2.2
2,404,107	+		BWI76_RS11405	0.31	+0.0
2,404,228	-		BWI76_RS11405	0.44	+0.6
2,404,246	+		BWI76_RS11405	0.46	-3.1
2,404,560	+		BWI76_RS11405	0.81	+0.5
2,404,562	+		BWI76_RS11405	0.81	-1.1
2,404,568	-		BWI76_RS11405	0.81	+0.7
2,404,570	-		BWI76_RS11405	0.82	-1.3
2,404,570	-		BWI76_RS11405	0.82	-1.1
2,404,570	-		BWI76_RS11405	0.82	+1.2
2,404,606	-		BWI76_RS11405	0.86	-0.3
2,404,609	+		BWI76_RS11405	0.86	-0.1
2,404,688	-				-1.8
2,404,777	+				+1.2
2,404,785	-				+1.5
2,404,877	+				+0.3
2,404,877	+				-0.8
2,405,126	-		BWI76_RS11410	0.47	+0.9
2,405,253	-		BWI76_RS11410	0.67	+0.5
2,405,461	-				-0.0
2,405,737	-				+0.9