Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00560

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
112,188	+		BWI76_RS00545	0.73	+0.7
112,191	-		BWI76_RS00545	0.74	-0.3
112,209	-		BWI76_RS00545	0.76	-0.4
112,229	-		BWI76_RS00545	0.78	-0.3
112,229	-		BWI76_RS00545	0.78	+0.1
112,241	-		BWI76_RS00545	0.80	-0.5
112,245	+		BWI76_RS00545	0.80	+0.0
112,253	-		BWI76_RS00545	0.81	-0.7
112,253	-		BWI76_RS00545	0.81	+0.7
112,256	+		BWI76_RS00545	0.81	-0.1
112,270	-		BWI76_RS00545	0.83	+1.3
112,274	+		BWI76_RS00545	0.84	+1.5
112,296	-		BWI76_RS00545	0.86	+0.6
112,296	-		BWI76_RS00545	0.86	+1.3
112,296	-		BWI76_RS00545	0.86	+0.3
112,302	+		BWI76_RS00545	0.87	-0.3
112,306	-		BWI76_RS00545	0.87	-0.2
112,306	-		BWI76_RS00545	0.87	-1.2
112,326	+		BWI76_RS00545	0.90	+1.3
112,326	+				+0.3
112,326	+		BWI76_RS00545	0.90	+0.8
112,326	+		BWI76_RS00545	0.90	-0.2
112,326	+		BWI76_RS00545	0.90	-0.3
112,326	+		BWI76_RS00545	0.90	-0.2
112,334	-				-1.6
112,334	-				-0.2
112,334	-				+0.7
112,375	+				-0.3
112,383	-				-1.3
112,383	-				+0.3
112,383	-				-1.1
112,403	+				+0.8
112,427	-				+0.3
112,442	-				-2.9
112,442	-				-3.1
112,444	+				+0.5
112,444	+				+0.9
112,444	+				-0.2
112,444	+				+0.6
112,447	+				-1.5
112,447	-				-0.2
112,449	+				+2.5
112,452	+				+0.2
112,455	-				+0.0
112,457	-				+0.3
112,459	+				-3.0
112,460	-				-0.3
112,471	+				+0.3
112,471	+				-0.2
112,471	+				-3.5
112,479	-				+0.1
112,479	-				-0.3
112,481	+				-0.7
112,512	-		BWI76_RS00550	0.16	+1.1
112,514	+		BWI76_RS00550	0.17	+0.4
112,519	+		BWI76_RS00550	0.19	-0.3
112,519	+		BWI76_RS00550	0.19	+1.1
112,522	-		BWI76_RS00550	0.20	+0.8
112,524	+		BWI76_RS00550	0.20	+0.6
112,532	-		BWI76_RS00550	0.23	-1.7
112,534	+		BWI76_RS00550	0.24	-4.0
112,536	+		BWI76_RS00550	0.25	+0.2
112,536	+		BWI76_RS00550	0.25	+1.2
112,536	+		BWI76_RS00550	0.25	-0.1
112,536	+		BWI76_RS00550	0.25	+1.0
112,536	+		BWI76_RS00550	0.25	-1.1
112,536	+		BWI76_RS00550	0.25	+0.6
112,544	-		BWI76_RS00550	0.28	+0.1
112,546	-		BWI76_RS00550	0.29	-1.6
112,563	+		BWI76_RS00550	0.35	-1.0
112,574	+		BWI76_RS00550	0.39	+0.6
112,577	+		BWI76_RS00550	0.40	-2.8
112,577	+		BWI76_RS00550	0.40	-0.3
112,582	+		BWI76_RS00550	0.42	-0.1
112,590	-		BWI76_RS00550	0.45	+0.1
112,590	-		BWI76_RS00550	0.45	+1.1
112,590	-		BWI76_RS00550	0.45	+1.0
112,613	+		BWI76_RS00550	0.53	+0.5
112,614	+		BWI76_RS00550	0.54	+0.2
112,614	+		BWI76_RS00550	0.54	-0.5
112,614	+		BWI76_RS00550	0.54	-0.1
112,622	-		BWI76_RS00550	0.57	+1.1
112,622	-		BWI76_RS00550	0.57	+1.8
112,627	+		BWI76_RS00550	0.59	+0.5
112,632	+		BWI76_RS00550	0.60	+0.1
112,632	+		BWI76_RS00550	0.60	-3.3
112,632	+		BWI76_RS00550	0.60	-0.7
112,635	-		BWI76_RS00550	0.61	-1.0
112,635	-		BWI76_RS00550	0.61	-0.3
112,635	-		BWI76_RS00550	0.61	+1.0
112,652	+		BWI76_RS00550	0.68	+0.1
112,657	+		BWI76_RS00550	0.70	-3.6
112,675	+		BWI76_RS00550	0.76	+0.4
112,675	+		BWI76_RS00550	0.76	+1.4
112,675	+				+1.3
112,677	+		BWI76_RS00550	0.77	+0.7
112,677	+		BWI76_RS00550	0.77	+0.3
112,690	+		BWI76_RS00550	0.82	+0.1
112,690	+		BWI76_RS00550	0.82	+0.6
112,698	+		BWI76_RS00550	0.85	-1.8
112,698	+		BWI76_RS00550	0.85	+0.1
112,706	+		BWI76_RS00550	0.88	-0.8
112,706	-		BWI76_RS00550	0.88	+1.3
112,768	+				-0.5
112,768	+				+0.8
112,768	+				+2.1
112,768	+				+0.1
112,768	+				-0.2
112,772	-				-3.0
112,776	-				-0.3
112,779	+				-0.9
112,794	+		BWI76_RS00555	0.11	-1.3
112,799	+		BWI76_RS00555	0.12	-0.6
112,802	-		BWI76_RS00555	0.12	-0.4
112,802	-		BWI76_RS00555	0.12	+2.8
112,802	-		BWI76_RS00555	0.12	-0.4
112,802	-		BWI76_RS00555	0.12	+0.4
112,810	-				+0.3
112,810	-		BWI76_RS00555	0.14	-0.8
112,810	-		BWI76_RS00555	0.14	+0.4
112,820	-		BWI76_RS00555	0.16	-0.6
112,856	+		BWI76_RS00555	0.25	-2.3
112,864	-		BWI76_RS00555	0.26	-2.6
112,864	-		BWI76_RS00555	0.26	+0.6
112,906	-		BWI76_RS00555	0.36	-0.1
112,906	-		BWI76_RS00555	0.36	-0.8
112,956	+		BWI76_RS00555	0.47	-0.3
112,983	+		BWI76_RS00555	0.54	-0.7
112,983	+		BWI76_RS00555	0.54	+1.3
112,983	+		BWI76_RS00555	0.54	-0.9
112,990	-		BWI76_RS00555	0.55	-0.3
112,991	-		BWI76_RS00555	0.55	+0.1
112,991	-		BWI76_RS00555	0.55	+0.3
112,991	-		BWI76_RS00555	0.55	-3.6
112,991	-		BWI76_RS00555	0.55	-2.2
112,991	-		BWI76_RS00555	0.55	+1.3
112,991	-		BWI76_RS00555	0.55	-0.2
112,991	-		BWI76_RS00555	0.55	-1.2
113,073	-		BWI76_RS00555	0.74	+0.4
113,073	-		BWI76_RS00555	0.74	-1.6
113,079	+		BWI76_RS00555	0.76	+0.2
113,110	-		BWI76_RS00555	0.83	-3.6
113,157	+				-0.2
113,157	+				-1.1
113,165	-				+0.9
113,165	-				-0.3
113,168	-				+0.8
113,179	+				+0.4
113,179	+				+0.1
113,187	-				-2.7
113,193	+				+1.3
113,309	+		BWI76_RS00560	0.23	-3.9
113,346	+		BWI76_RS00560	0.30	-3.4
113,540	+		BWI76_RS00560	0.65	+0.4
113,590	-		BWI76_RS00560	0.74	-0.7
113,686	+				+0.0
113,702	-				+0.7
113,970	+		BWI76_RS00565	0.44	+0.9
113,970	+		BWI76_RS00565	0.44	-0.8
113,996	+		BWI76_RS00565	0.52	-0.3
114,014	-		BWI76_RS00565	0.58	-0.3
114,032	+		BWI76_RS00565	0.63	-0.7
114,255	+		BWI76_RS00570	0.16	+0.4
114,255	+		BWI76_RS00570	0.16	+0.6
114,448	-		BWI76_RS00570	0.45	+0.8
114,461	+		BWI76_RS00570	0.47	+0.2
114,539	+		BWI76_RS00570	0.59	+0.8
114,547	-		BWI76_RS00570	0.60	-1.6
114,547	-		BWI76_RS00570	0.60	+0.8
114,547	-		BWI76_RS00570	0.60	-0.3
114,646	-		BWI76_RS00570	0.75	-0.0
114,679	-		BWI76_RS00570	0.80	-1.9
114,704	-		BWI76_RS00570	0.84	+0.0
114,718	+		BWI76_RS00570	0.86	-2.2
114,726	-		BWI76_RS00570	0.87	-0.7