Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00535

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
108,910	-				+2.0
108,932	+				+0.3
108,991	+				+0.3
108,991	+				-0.3
108,991	+				-1.0
108,999	-				+2.1
108,999	-				-3.3
108,999	-				+0.8
109,048	+		BWI76_RS00530	0.13	+2.5
109,054	+		BWI76_RS00530	0.14	+0.1
109,060	+		BWI76_RS00530	0.15	-2.9
109,062	-		BWI76_RS00530	0.15	+1.1
109,065	+		BWI76_RS00530	0.15	-1.9
109,065	+		BWI76_RS00530	0.15	+0.3
109,065	+		BWI76_RS00530	0.15	-0.3
109,066	+		BWI76_RS00530	0.15	-0.6
109,068	-		BWI76_RS00530	0.15	-2.6
109,068	-		BWI76_RS00530	0.15	-0.7
109,068	-		BWI76_RS00530	0.15	-1.3
109,068	-		BWI76_RS00530	0.15	-0.5
109,068	-		BWI76_RS00530	0.15	+1.2
109,073	-		BWI76_RS00530	0.16	-0.6
109,073	-		BWI76_RS00530	0.16	-0.4
109,073	-		BWI76_RS00530	0.16	-1.6
109,073	-		BWI76_RS00530	0.16	-3.4
109,074	-		BWI76_RS00530	0.16	-3.4
109,092	+		BWI76_RS00530	0.18	+1.3
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	+0.3
109,092	+		BWI76_RS00530	0.18	-2.7
109,092	+		BWI76_RS00530	0.18	+0.1
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	+0.8
109,092	+		BWI76_RS00530	0.18	+0.7
109,092	+		BWI76_RS00530	0.18	+0.9
109,092	+		BWI76_RS00530	0.18	+0.4
109,092	+		BWI76_RS00530	0.18	-0.3
109,092	+		BWI76_RS00530	0.18	-0.2
109,092	+		BWI76_RS00530	0.18	-0.3
109,092	+		BWI76_RS00530	0.18	-1.1
109,100	-		BWI76_RS00530	0.19	-2.9
109,100	-		BWI76_RS00530	0.19	-0.3
109,100	-		BWI76_RS00530	0.19	-1.6
109,100	-		BWI76_RS00530	0.19	-1.1
109,100	-		BWI76_RS00530	0.19	-0.4
109,100	-		BWI76_RS00530	0.19	-3.6
109,100	-				+0.3
109,100	-		BWI76_RS00530	0.19	-2.6
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-		BWI76_RS00530	0.19	-0.3
109,100	-		BWI76_RS00530	0.19	+0.7
109,100	-				+0.3
109,100	-		BWI76_RS00530	0.19	+1.3
109,100	-		BWI76_RS00530	0.19	-0.3
109,102	+		BWI76_RS00530	0.19	-1.3
109,104	+		BWI76_RS00530	0.19	-0.3
109,110	+		BWI76_RS00530	0.20	-1.2
109,110	+		BWI76_RS00530	0.20	+0.4
109,110	+		BWI76_RS00530	0.20	+1.1
109,110	+		BWI76_RS00530	0.20	-1.1
109,110	+		BWI76_RS00530	0.20	-0.0
109,110	+		BWI76_RS00530	0.20	-3.0
109,113	-		BWI76_RS00530	0.20	-2.6
109,113	-		BWI76_RS00530	0.20	-2.3
109,118	-		BWI76_RS00530	0.20	+0.4
109,118	-		BWI76_RS00530	0.20	+0.8
109,118	-		BWI76_RS00530	0.20	-0.7
109,118	-		BWI76_RS00530	0.20	-1.9
109,118	-		BWI76_RS00530	0.20	-2.7
109,122	+		BWI76_RS00530	0.21	+0.2
109,125	+		BWI76_RS00530	0.21	+1.2
109,125	+		BWI76_RS00530	0.21	-0.1
109,125	+		BWI76_RS00530	0.21	+1.8
109,133	-		BWI76_RS00530	0.22	-1.9
109,133	-		BWI76_RS00530	0.22	-2.6
109,133	-		BWI76_RS00530	0.22	-1.6
109,182	+		BWI76_RS00530	0.27	-0.6
109,190	-		BWI76_RS00530	0.28	-3.0
109,195	+		BWI76_RS00530	0.28	-2.8
109,195	+		BWI76_RS00530	0.28	+0.9
109,195	+		BWI76_RS00530	0.28	+0.2
109,195	+		BWI76_RS00530	0.28	+1.3
109,203	-		BWI76_RS00530	0.29	-1.3
109,203	-		BWI76_RS00530	0.29	-0.0
109,203	-		BWI76_RS00530	0.29	-0.0
109,203	-		BWI76_RS00530	0.29	-2.4
109,212	+		BWI76_RS00530	0.30	+1.3
109,217	+		BWI76_RS00530	0.31	-1.9
109,236	-		BWI76_RS00530	0.33	+0.9
109,253	+		BWI76_RS00530	0.34	-0.7
109,260	+		BWI76_RS00530	0.35	+0.6
109,260	+		BWI76_RS00530	0.35	-2.9
109,260	+		BWI76_RS00530	0.35	+1.9
109,268	-		BWI76_RS00530	0.36	+0.2
109,271	+		BWI76_RS00530	0.36	-2.6
109,277	+		BWI76_RS00530	0.37	-2.3
109,279	-		BWI76_RS00530	0.37	+1.3
109,292	+		BWI76_RS00530	0.38	+0.3
109,292	+		BWI76_RS00530	0.38	+0.1
109,292	+		BWI76_RS00530	0.38	+0.5
109,292	+		BWI76_RS00530	0.38	-0.3
109,292	+		BWI76_RS00530	0.38	-1.3
109,292	+		BWI76_RS00530	0.38	+0.8
109,292	+		BWI76_RS00530	0.38	-1.1
109,292	+		BWI76_RS00530	0.38	+1.0
109,292	+		BWI76_RS00530	0.38	+0.7
109,294	+		BWI76_RS00530	0.38	+1.3
109,294	+		BWI76_RS00530	0.38	-0.3
109,297	-				+0.3
109,300	-		BWI76_RS00530	0.39	+0.6
109,300	-		BWI76_RS00530	0.39	-1.7
109,300	-		BWI76_RS00530	0.39	+0.7
109,300	-		BWI76_RS00530	0.39	+0.2
109,300	-		BWI76_RS00530	0.39	+0.4
109,300	-		BWI76_RS00530	0.39	-0.6
109,300	-		BWI76_RS00530	0.39	+0.4
109,300	-		BWI76_RS00530	0.39	-4.4
109,300	-		BWI76_RS00530	0.39	-0.5
109,300	-		BWI76_RS00530	0.39	+0.2
109,302	-		BWI76_RS00530	0.39	-1.3
109,302	-		BWI76_RS00530	0.39	+0.1
109,302	-		BWI76_RS00530	0.39	-0.7
109,302	-		BWI76_RS00530	0.39	-0.7
109,302	-		BWI76_RS00530	0.39	-0.2
109,304	+		BWI76_RS00530	0.39	-0.2
109,304	+		BWI76_RS00530	0.39	+1.4
109,307	-		BWI76_RS00530	0.40	+0.9
109,314	-		BWI76_RS00530	0.40	-0.3
109,337	-		BWI76_RS00530	0.43	-0.6
109,368	-		BWI76_RS00530	0.46	-0.3
109,377	+		BWI76_RS00530	0.47	+0.3
109,382	+		BWI76_RS00530	0.47	+0.9
109,382	+		BWI76_RS00530	0.47	+1.3
109,382	+		BWI76_RS00530	0.47	+0.2
109,382	+		BWI76_RS00530	0.47	-1.6
109,382	+		BWI76_RS00530	0.47	+1.3
109,382	+		BWI76_RS00530	0.47	+3.4
109,385	-		BWI76_RS00530	0.48	-2.2
109,385	-		BWI76_RS00530	0.48	-2.4
109,387	-		BWI76_RS00530	0.48	-3.1
109,420	+		BWI76_RS00530	0.51	-0.7
109,420	+		BWI76_RS00530	0.51	+1.0
109,420	+		BWI76_RS00530	0.51	+0.3
109,420	+		BWI76_RS00530	0.51	+1.1
109,420	+		BWI76_RS00530	0.51	+0.3
109,425	+		BWI76_RS00530	0.52	-1.3
109,426	-		BWI76_RS00530	0.52	+0.8
109,428	-		BWI76_RS00530	0.52	+0.1
109,428	-		BWI76_RS00530	0.52	+0.3
109,428	-		BWI76_RS00530	0.52	+0.8
109,428	-		BWI76_RS00530	0.52	+1.3
109,428	-		BWI76_RS00530	0.52	-0.0
109,428	-		BWI76_RS00530	0.52	-2.3
109,428	-		BWI76_RS00530	0.52	-0.3
109,428	-		BWI76_RS00530	0.52	+0.5
109,428	-		BWI76_RS00530	0.52	+2.3
109,430	+		BWI76_RS00530	0.52	+0.1
109,438	+		BWI76_RS00530	0.53	-1.7
109,438	-		BWI76_RS00530	0.53	+1.8
109,444	-		BWI76_RS00530	0.54	+2.8
109,495	+		BWI76_RS00530	0.59	+2.0
109,506	+		BWI76_RS00530	0.60	+0.9
109,519	+		BWI76_RS00530	0.61	-1.4
109,525	+		BWI76_RS00530	0.62	+0.9
109,527	-		BWI76_RS00530	0.62	+0.8
109,529	+		BWI76_RS00530	0.62	+0.9
109,530	+		BWI76_RS00530	0.62	+0.8
109,530	+		BWI76_RS00530	0.62	-0.2
109,532	-		BWI76_RS00530	0.63	-2.9
109,532	-		BWI76_RS00530	0.63	-1.7
109,532	-		BWI76_RS00530	0.63	-3.3
109,532	-		BWI76_RS00530	0.63	+0.3
109,538	+		BWI76_RS00530	0.63	-1.3
109,538	+		BWI76_RS00530	0.63	-0.3
109,538	+		BWI76_RS00530	0.63	-0.7
109,538	+		BWI76_RS00530	0.63	-2.6
109,538	+		BWI76_RS00530	0.63	+0.8
109,538	+		BWI76_RS00530	0.63	+0.7
109,538	+		BWI76_RS00530	0.63	-1.1
109,538	+		BWI76_RS00530	0.63	+0.0
109,538	+		BWI76_RS00530	0.63	-1.2
109,538	-		BWI76_RS00530	0.63	+1.0
109,538	-		BWI76_RS00530	0.63	+0.4
109,540	+				+0.3
109,540	+		BWI76_RS00530	0.64	+1.0
109,543	+		BWI76_RS00530	0.64	-0.7
109,546	-		BWI76_RS00530	0.64	+1.3
109,546	-		BWI76_RS00530	0.64	-0.4
109,546	-		BWI76_RS00530	0.64	-0.4
109,548	-		BWI76_RS00530	0.64	+1.5
109,548	-		BWI76_RS00530	0.64	-1.4
109,551	-		BWI76_RS00530	0.65	-0.1
109,551	-		BWI76_RS00530	0.65	-4.7
109,556	+		BWI76_RS00530	0.65	+1.0
109,559	-		BWI76_RS00530	0.65	-1.6
109,561	-		BWI76_RS00530	0.66	+0.6
109,563	+		BWI76_RS00530	0.66	-0.7
109,571	+		BWI76_RS00530	0.67	-0.7
109,574	-		BWI76_RS00530	0.67	-0.1
109,574	-		BWI76_RS00530	0.67	-0.5
109,580	+		BWI76_RS00530	0.68	-4.2
109,588	-		BWI76_RS00530	0.68	+1.0
109,592	+		BWI76_RS00530	0.69	-2.7
109,607	+		BWI76_RS00530	0.70	-3.0
109,619	-		BWI76_RS00530	0.72	-0.2
109,620	+		BWI76_RS00530	0.72	-2.4
109,620	+		BWI76_RS00530	0.72	-1.2
109,628	-		BWI76_RS00530	0.72	-1.3
109,628	-		BWI76_RS00530	0.72	+1.7
109,628	-				+0.3
109,628	-		BWI76_RS00530	0.72	-0.1
109,630	+		BWI76_RS00530	0.73	-2.9
109,670	-		BWI76_RS00530	0.77	-1.5
109,684	+		BWI76_RS00530	0.78	-0.3
109,692	-		BWI76_RS00530	0.79	-0.5
109,697	-		BWI76_RS00530	0.80	-0.6
109,707	-		BWI76_RS00530	0.81	-0.2
109,709	+		BWI76_RS00530	0.81	+1.3
109,709	+		BWI76_RS00530	0.81	+0.3
109,710	+		BWI76_RS00530	0.81	+1.7
109,710	+		BWI76_RS00530	0.81	-2.2
109,711	+		BWI76_RS00530	0.81	-0.3
109,711	+		BWI76_RS00530	0.81	-0.1
109,711	+		BWI76_RS00530	0.81	+0.8
109,712	-		BWI76_RS00530	0.81	+1.1
109,718	-		BWI76_RS00530	0.82	-1.6
109,718	-		BWI76_RS00530	0.82	+1.1
109,720	+		BWI76_RS00530	0.82	+0.4
109,720	+		BWI76_RS00530	0.82	-0.2
109,720	+		BWI76_RS00530	0.82	-0.2
109,720	+		BWI76_RS00530	0.82	+0.1
109,720	+		BWI76_RS00530	0.82	+0.5
109,720	+		BWI76_RS00530	0.82	+0.1
109,721	+		BWI76_RS00530	0.82	-1.3
109,722	-		BWI76_RS00530	0.82	+1.3
109,727	+		BWI76_RS00530	0.83	+1.3
109,727	+		BWI76_RS00530	0.83	+1.4
109,727	+				+1.3
109,727	+		BWI76_RS00530	0.83	-0.3
109,727	+		BWI76_RS00530	0.83	+0.6
109,727	+		BWI76_RS00530	0.83	+0.3
109,727	+		BWI76_RS00530	0.83	+3.7
109,728	-		BWI76_RS00530	0.83	+0.7
109,728	-		BWI76_RS00530	0.83	-1.1
109,728	-		BWI76_RS00530	0.83	+0.8
109,733	-		BWI76_RS00530	0.83	-0.5
109,733	-		BWI76_RS00530	0.83	-1.6
109,733	-		BWI76_RS00530	0.83	+1.5
109,733	-		BWI76_RS00530	0.83	-0.3
109,735	-		BWI76_RS00530	0.83	-0.1
109,735	-		BWI76_RS00530	0.83	-1.0
109,735	-		BWI76_RS00530	0.83	+2.1
109,735	-		BWI76_RS00530	0.83	-1.3
109,735	-		BWI76_RS00530	0.83	+0.0
109,735	-		BWI76_RS00530	0.83	-0.6
109,735	-		BWI76_RS00530	0.83	-1.1
109,735	-		BWI76_RS00530	0.83	+0.2
109,735	-		BWI76_RS00530	0.83	+1.2
109,735	-		BWI76_RS00530	0.83	+1.0
109,735	-		BWI76_RS00530	0.83	-2.9
109,742	+		BWI76_RS00530	0.84	+0.3
109,744	+		BWI76_RS00530	0.84	-0.3
109,744	+		BWI76_RS00530	0.84	+0.2
109,752	+		BWI76_RS00530	0.85	+0.2
109,752	+		BWI76_RS00530	0.85	+1.0
109,752	+		BWI76_RS00530	0.85	+0.3
109,752	-				-0.3
109,760	-		BWI76_RS00530	0.86	+0.2
109,760	-		BWI76_RS00530	0.86	+1.3
109,760	-		BWI76_RS00530	0.86	+2.4
109,798	+		BWI76_RS00530	0.90	+1.3
109,798	+		BWI76_RS00530	0.90	-1.4
109,806	-				+3.0
109,806	-				-2.3
109,806	-				+0.5
109,811	-				-1.1
109,848	+				-1.6
109,848	+				+0.8
109,848	+				+0.9
109,851	-				-0.3
109,856	-				+0.3
109,856	-				+0.5
109,856	-				-0.2
109,857	-				+1.3
109,862	+				-1.1
109,863	+				-2.1
109,863	+				-1.6
109,891	+				+0.7
109,891	+				+1.5
109,891	+				-0.3
109,899	-				-1.1
109,911	-				+0.3
109,927	+				+1.3
109,933	+				+0.5
109,934	+				-0.9
109,934	+				-0.1
109,942	-		BWI76_RS00535	0.10	-3.6
109,945	+		BWI76_RS00535	0.11	-0.3
109,945	+		BWI76_RS00535	0.11	+1.2
109,945	+		BWI76_RS00535	0.11	+0.3
109,945	+		BWI76_RS00535	0.11	+0.3
109,946	+		BWI76_RS00535	0.12	-0.3
109,946	+		BWI76_RS00535	0.12	+0.3
109,946	+		BWI76_RS00535	0.12	-2.7
109,946	+		BWI76_RS00535	0.12	+0.4
109,946	+		BWI76_RS00535	0.12	-1.7
109,953	-		BWI76_RS00535	0.14	+0.3
109,953	-		BWI76_RS00535	0.14	-1.7
109,954	-		BWI76_RS00535	0.14	-1.3
109,954	-		BWI76_RS00535	0.14	+1.3
109,954	-		BWI76_RS00535	0.14	-1.6
109,954	-		BWI76_RS00535	0.14	+0.9
109,954	-		BWI76_RS00535	0.14	-3.0
109,954	-		BWI76_RS00535	0.14	+1.3
109,954	-				+1.3
109,954	-		BWI76_RS00535	0.14	-1.1
109,954	-		BWI76_RS00535	0.14	+1.3
109,960	+		BWI76_RS00535	0.16	-3.3
109,989	+		BWI76_RS00535	0.25	+0.7
109,989	-		BWI76_RS00535	0.25	-1.3
109,989	-		BWI76_RS00535	0.25	-1.1
109,995	+		BWI76_RS00535	0.27	+2.1
110,000	+		BWI76_RS00535	0.29	-0.3
110,000	+		BWI76_RS00535	0.29	-1.9
110,008	-		BWI76_RS00535	0.31	-2.9
110,008	-		BWI76_RS00535	0.31	+1.3
110,008	-		BWI76_RS00535	0.31	-0.3
110,008	-		BWI76_RS00535	0.31	+0.3
110,043	+		BWI76_RS00535	0.43	-0.1
110,051	-		BWI76_RS00535	0.45	+0.9
110,051	-		BWI76_RS00535	0.45	-1.6
110,051	-		BWI76_RS00535	0.45	+0.1
110,051	-		BWI76_RS00535	0.45	-2.7
110,053	+		BWI76_RS00535	0.46	+0.2
110,095	+		BWI76_RS00535	0.59	+1.3
110,126	+		BWI76_RS00535	0.69	-2.8
110,126	+		BWI76_RS00535	0.69	+0.7
110,126	+		BWI76_RS00535	0.69	-2.1
110,126	+		BWI76_RS00535	0.69	+1.3
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110,128	+		BWI76_RS00535	0.70	-0.3
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110,136	+		BWI76_RS00535	0.72	-0.7
110,136	-		BWI76_RS00535	0.72	-1.3
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110,144	-		BWI76_RS00535	0.75	-2.4
110,144	-		BWI76_RS00535	0.75	-2.7
110,148	+		BWI76_RS00535	0.76	-0.2
110,149	-		BWI76_RS00535	0.76	-1.3
110,166	+		BWI76_RS00535	0.82	-1.1
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110,191	+		BWI76_RS00535	0.90	-1.1
110,192	+				-1.1
110,199	+				+0.3
110,200	-				-0.7
110,200	-				-1.1
110,204	+				-2.6
110,207	+				-2.7
110,207	-				+1.2
110,207	-				+1.5
110,207	-				-0.7
110,213	+				-0.7
110,213	+				-0.3
110,213	+				-1.8
110,216	+				-0.7
110,216	+				+0.2
110,216	+				-0.1
110,216	+				+0.1
110,216	+				+0.8
110,216	+				+0.5
110,223	+				-1.3
110,224	-				-0.2
110,224	-				-1.7
110,224	-				-3.3
110,224	-				-2.2
110,224	-				-1.3
110,231	-				-3.9
110,231	-				+0.7
110,231	-				+0.9
110,231	-				-1.3
110,246	+				+0.3
110,246	+				-2.8
110,256	+				+0.3
110,264	-				-1.1
110,293	+				+0.5
110,303	-				-2.4
110,303	-				-0.3
110,303	-				-0.2
110,321	+				+1.0
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110,328	+				+1.2
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110,330	+				+0.1
110,349	-				-2.3
110,385	+		BWI76_RS00540	0.12	-1.3
110,385	+		BWI76_RS00540	0.12	+2.0
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110,431	+		BWI76_RS00540	0.16	-2.1
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110,542	+		BWI76_RS00540	0.24	-3.8
110,542	+		BWI76_RS00540	0.24	-2.7
110,542	+		BWI76_RS00540	0.24	+1.1
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110,550	-		BWI76_RS00540	0.24	-2.2
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110,556	+		BWI76_RS00540	0.25	-2.3
110,589	+				+1.3
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110,597	-		BWI76_RS00540	0.28	+1.4
110,599	+		BWI76_RS00540	0.28	-2.8
110,599	+		BWI76_RS00540	0.28	-0.3
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110,607	-		BWI76_RS00540	0.29	-1.3
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110,770	+		BWI76_RS00540	0.40	-2.8
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110,806	+		BWI76_RS00540	0.43	-1.1
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110,826	+		BWI76_RS00540	0.45	+1.1
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110,870	-		BWI76_RS00540	0.48	-1.1
110,933	+		BWI76_RS00540	0.52	-3.3
110,987	+		BWI76_RS00540	0.56	+0.6
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110,994	+		BWI76_RS00540	0.57	-1.3
110,994	+		BWI76_RS00540	0.57	-0.3
110,994	+		BWI76_RS00540	0.57	+3.6
110,994	+		BWI76_RS00540	0.57	+0.3
110,995	-		BWI76_RS00540	0.57	-1.3
111,002	-		BWI76_RS00540	0.57	-4.0
111,002	-		BWI76_RS00540	0.57	-1.6
111,021	-		BWI76_RS00540	0.59	-1.1
111,037	+		BWI76_RS00540	0.60	-0.5
111,037	+		BWI76_RS00540	0.60	+0.9
111,112	+		BWI76_RS00540	0.65	+1.8
111,122	+		BWI76_RS00540	0.66	+0.6
111,150	-		BWI76_RS00540	0.68	-1.6
111,214	+		BWI76_RS00540	0.73	+0.5