Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28135

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
6,264,269	+		PFLU_RS28130	0.36	+0.7
6,264,269	+		PFLU_RS28130	0.36	+0.2
6,264,269	+		PFLU_RS28130	0.36	+1.1
6,264,269	+		PFLU_RS28130	0.36	+0.5
6,264,270	-		PFLU_RS28130	0.37	-1.7
6,264,270	-		PFLU_RS28130	0.37	-0.3
6,264,270	-		PFLU_RS28130	0.37	+2.8
6,264,270	-		PFLU_RS28130	0.37	+1.8
6,264,270	-		PFLU_RS28130	0.37	-1.7
6,264,314	+		PFLU_RS28130	0.40	+0.9
6,264,315	-		PFLU_RS28130	0.40	+0.8
6,264,315	-		PFLU_RS28130	0.40	-1.5
6,264,315	-		PFLU_RS28130	0.40	-1.3
6,264,315	-		PFLU_RS28130	0.40	-1.4
6,264,374	+		PFLU_RS28130	0.45	+1.0
6,264,375	-		PFLU_RS28130	0.45	+0.5
6,264,643	+		PFLU_RS28130	0.68	+0.3
6,264,644	-		PFLU_RS28130	0.68	+1.6
6,264,674	+		PFLU_RS28130	0.71	+0.7
6,264,674	+		PFLU_RS28130	0.71	-0.1
6,264,674	+		PFLU_RS28130	0.71	+1.8
6,264,674	+		PFLU_RS28130	0.71	+0.0
6,264,674	+		PFLU_RS28130	0.71	-1.4
6,264,674	+		PFLU_RS28130	0.71	-1.5
6,264,674	+		PFLU_RS28130	0.71	-0.8
6,264,674	+		PFLU_RS28130	0.71	+0.2
6,264,674	+		PFLU_RS28130	0.71	-1.6
6,264,674	+		PFLU_RS28130	0.71	-0.8
6,264,674	+		PFLU_RS28130	0.71	+1.8
6,264,674	+		PFLU_RS28130	0.71	-0.2
6,264,674	+		PFLU_RS28130	0.71	+1.2
6,264,674	+		PFLU_RS28130	0.71	-1.1
6,264,674	+		PFLU_RS28130	0.71	+2.2
6,264,674	+		PFLU_RS28130	0.71	+1.3
6,264,674	+		PFLU_RS28130	0.71	-1.5
6,264,674	+		PFLU_RS28130	0.71	-2.0
6,264,674	+		PFLU_RS28130	0.71	+0.2
6,264,675	-		PFLU_RS28130	0.71	+0.6
6,264,675	-		PFLU_RS28130	0.71	-0.5
6,264,675	-		PFLU_RS28130	0.71	+0.7
6,264,675	-		PFLU_RS28130	0.71	+1.3
6,264,675	-		PFLU_RS28130	0.71	+1.7
6,264,675	-		PFLU_RS28130	0.71	+1.0
6,264,675	-		PFLU_RS28130	0.71	+1.9
6,264,675	-		PFLU_RS28130	0.71	-0.8
6,264,675	-		PFLU_RS28130	0.71	+0.5
6,264,675	-		PFLU_RS28130	0.71	+2.4
6,264,675	-		PFLU_RS28130	0.71	+0.2
6,264,675	-		PFLU_RS28130	0.71	+0.2
6,264,675	-		PFLU_RS28130	0.71	+3.4
6,264,675	-		PFLU_RS28130	0.71	+2.6
6,264,675	-		PFLU_RS28130	0.71	-1.6
6,264,732	+		PFLU_RS28130	0.76	-1.6
6,264,732	+		PFLU_RS28130	0.76	+0.9
6,264,732	+		PFLU_RS28130	0.76	-2.8
6,264,733	-		PFLU_RS28130	0.76	+2.5
6,264,733	-		PFLU_RS28130	0.76	-0.1
6,264,733	-		PFLU_RS28130	0.76	-0.7
6,264,733	-		PFLU_RS28130	0.76	+0.9
6,264,750	-		PFLU_RS28130	0.77	-0.6
6,264,750	-		PFLU_RS28130	0.77	-0.6
6,265,045	+				-0.8
6,265,051	-				+1.4
6,265,082	-				-0.4
6,265,082	-				+1.4
6,265,082	-				+0.3
6,265,082	-				+2.2
6,265,082	-				-1.6
6,265,082	-				+1.2
6,265,082	-				+1.1
6,265,146	+				+2.3
6,265,147	-				+1.6
6,265,147	-				-1.3
6,265,147	-				+1.6
6,265,147	-				-1.5
6,265,147	-				+1.1
6,265,147	-				-1.6
6,265,166	+				-1.3
6,265,166	+				-2.3
6,265,166	+				+1.5
6,265,166	+				+0.7
6,265,166	+				-0.3
6,265,166	+				-1.2
6,265,167	-				-0.6
6,265,167	-				+0.5
6,265,167	-				-0.2
6,265,167	-				+2.0
6,265,167	-				+0.3
6,265,167	-				+0.6
6,265,167	-				+0.9
6,265,167	-				+0.0
6,265,215	+				+0.1
6,265,215	+				-2.3
6,265,215	+				-1.9
6,265,215	+				+2.5
6,265,215	+				+1.8
6,265,215	+				-1.6
6,265,215	+				-0.1
6,265,337	+		PFLU_RS28135	0.22	-1.2
6,265,338	-		PFLU_RS28135	0.22	+1.0
6,265,338	-		PFLU_RS28135	0.22	-2.1
6,265,338	-		PFLU_RS28135	0.22	-0.1
6,265,338	-		PFLU_RS28135	0.22	-2.5
6,265,338	-		PFLU_RS28135	0.22	-0.4
6,265,349	+		PFLU_RS28135	0.25	+0.6
6,265,349	+		PFLU_RS28135	0.25	-0.2
6,265,349	+		PFLU_RS28135	0.25	+1.4
6,265,349	+		PFLU_RS28135	0.25	+0.8
6,265,349	+		PFLU_RS28135	0.25	+0.6
6,265,349	+		PFLU_RS28135	0.25	-0.1
6,265,349	+		PFLU_RS28135	0.25	-0.3
6,265,349	+		PFLU_RS28135	0.25	-1.3
6,265,349	+		PFLU_RS28135	0.25	-0.1
6,265,349	+		PFLU_RS28135	0.25	-0.7
6,265,349	+		PFLU_RS28135	0.25	-1.7
6,265,349	+		PFLU_RS28135	0.25	+0.9
6,265,349	+		PFLU_RS28135	0.25	-1.1
6,265,349	+		PFLU_RS28135	0.25	+1.5
6,265,349	+		PFLU_RS28135	0.25	+0.5
6,265,349	+		PFLU_RS28135	0.25	+1.1
6,265,349	+		PFLU_RS28135	0.25	+0.3
6,265,349	+		PFLU_RS28135	0.25	-2.3
6,265,349	+		PFLU_RS28135	0.25	+2.0
6,265,349	+		PFLU_RS28135	0.25	+1.6
6,265,349	+		PFLU_RS28135	0.25	-1.1
6,265,350	-		PFLU_RS28135	0.25	+0.7
6,265,350	-		PFLU_RS28135	0.25	-1.3
6,265,350	-		PFLU_RS28135	0.25	-1.6
6,265,350	-		PFLU_RS28135	0.25	+0.7
6,265,350	-		PFLU_RS28135	0.25	-0.9
6,265,350	-		PFLU_RS28135	0.25	-1.2
6,265,350	-		PFLU_RS28135	0.25	-0.4
6,265,350	-		PFLU_RS28135	0.25	+0.3
6,265,350	-		PFLU_RS28135	0.25	-1.7
6,265,350	-		PFLU_RS28135	0.25	-1.8
6,265,350	-		PFLU_RS28135	0.25	-2.8
6,265,350	-		PFLU_RS28135	0.25	-1.4
6,265,350	-		PFLU_RS28135	0.25	+1.1
6,265,350	-		PFLU_RS28135	0.25	+0.9
6,265,350	-		PFLU_RS28135	0.25	+0.4
6,265,350	-		PFLU_RS28135	0.25	-1.3
6,265,368	+		PFLU_RS28135	0.30	-1.5
6,265,369	-		PFLU_RS28135	0.30	-0.8
6,265,369	-		PFLU_RS28135	0.30	-0.9
6,265,369	-		PFLU_RS28135	0.30	-0.1
6,265,592	+		PFLU_RS28135	0.88	-1.1
6,265,592	+		PFLU_RS28135	0.88	-2.3
6,265,592	+		PFLU_RS28135	0.88	-0.1
6,265,592	+		PFLU_RS28135	0.88	+0.9
6,265,592	+		PFLU_RS28135	0.88	+0.8
6,265,592	+		PFLU_RS28135	0.88	-0.3
6,265,592	+		PFLU_RS28135	0.88	+1.3
6,265,593	-		PFLU_RS28135	0.88	-0.7
6,265,593	-		PFLU_RS28135	0.88	-0.4
6,265,593	-		PFLU_RS28135	0.88	-0.4
6,265,593	-		PFLU_RS28135	0.88	-0.9
6,265,593	-		PFLU_RS28135	0.88	-1.7
6,265,593	-		PFLU_RS28135	0.88	-0.3
6,265,654	+				-0.5
6,265,654	+				+3.0
6,265,655	-				+0.9
6,265,666	+				+1.5
6,265,691	+				-0.9
6,265,691	+				-1.4
6,265,692	-				+0.2
6,265,692	-				-2.6
6,265,723	+				+0.8
6,265,723	+				-0.3
6,265,724	-				+0.3
6,265,751	+				-1.9
6,265,752	-				+0.2
6,265,752	-				-3.1
6,265,892	+				-2.1
6,265,892	+				+0.0
6,265,892	+				-0.5
6,265,892	+				-0.3
6,265,892	+				-0.3
6,265,892	+				+0.5
6,265,892	+				+2.8
6,265,892	+				-1.3
6,265,892	+				-0.7
6,265,892	+				+1.7
6,265,892	+				+0.6
6,265,892	+				+1.9
6,265,893	-				+0.9
6,265,893	-				-1.9
6,265,893	-				-0.1
6,265,893	-				+0.0
6,265,893	-				-1.3
6,265,893	-				+0.1
6,265,893	-				+0.0
6,265,893	-				-0.3
6,265,893	-				+0.6
6,266,100	+		PFLU_RS28140	0.20	-1.6
6,266,100	+		PFLU_RS28140	0.20	-1.9
6,266,101	-		PFLU_RS28140	0.20	-1.1
6,266,101	-		PFLU_RS28140	0.20	-0.5
6,266,101	-		PFLU_RS28140	0.20	+0.5
6,266,124	-		PFLU_RS28140	0.22	-0.2
6,266,124	-		PFLU_RS28140	0.22	+2.1
6,266,124	-		PFLU_RS28140	0.22	-0.1
6,266,142	+		PFLU_RS28140	0.24	-1.3
6,266,143	-		PFLU_RS28140	0.24	-0.9
6,266,143	-		PFLU_RS28140	0.24	-1.3
6,266,160	+		PFLU_RS28140	0.25	+0.5
6,266,160	+		PFLU_RS28140	0.25	-0.4
6,266,161	-		PFLU_RS28140	0.25	+0.9
6,266,195	+		PFLU_RS28140	0.28	-3.4
6,266,195	+		PFLU_RS28140	0.28	-1.8
6,266,195	+		PFLU_RS28140	0.28	+1.9
6,266,196	-		PFLU_RS28140	0.28	+0.9
6,266,196	-		PFLU_RS28140	0.28	+1.9
6,266,196	-		PFLU_RS28140	0.28	+1.2
6,266,198	+		PFLU_RS28140	0.28	+1.5
6,266,198	+		PFLU_RS28140	0.28	-0.1
6,266,198	+		PFLU_RS28140	0.28	+0.2
6,266,198	+		PFLU_RS28140	0.28	+3.2
6,266,198	+		PFLU_RS28140	0.28	+1.2
6,266,198	+		PFLU_RS28140	0.28	+0.8
6,266,198	+		PFLU_RS28140	0.28	+1.9
6,266,198	+		PFLU_RS28140	0.28	-1.4
6,266,198	+		PFLU_RS28140	0.28	+0.2
6,266,198	+		PFLU_RS28140	0.28	-2.0
6,266,198	+		PFLU_RS28140	0.28	-0.7
6,266,198	+		PFLU_RS28140	0.28	-2.7
6,266,198	+		PFLU_RS28140	0.28	-2.5
6,266,198	+		PFLU_RS28140	0.28	-1.4
6,266,198	+		PFLU_RS28140	0.28	-0.7
6,266,198	+		PFLU_RS28140	0.28	+1.1
6,266,199	-		PFLU_RS28140	0.28	-2.0
6,266,199	-		PFLU_RS28140	0.28	-1.0
6,266,199	-		PFLU_RS28140	0.28	+0.8
6,266,199	-		PFLU_RS28140	0.28	+0.3
6,266,199	-		PFLU_RS28140	0.28	+1.9
6,266,199	-		PFLU_RS28140	0.28	-0.0
6,266,199	-		PFLU_RS28140	0.28	-2.4
6,266,199	-		PFLU_RS28140	0.28	+2.5
6,266,199	-		PFLU_RS28140	0.28	-0.3
6,266,199	-		PFLU_RS28140	0.28	-1.0
6,266,237	+		PFLU_RS28140	0.31	-1.5
6,266,237	+		PFLU_RS28140	0.31	+0.8
6,266,237	+		PFLU_RS28140	0.31	-0.0
6,266,237	+		PFLU_RS28140	0.31	+1.5
6,266,238	-		PFLU_RS28140	0.31	-0.1
6,266,238	-		PFLU_RS28140	0.31	-1.7
6,266,379	+		PFLU_RS28140	0.42	-0.7
6,266,379	+		PFLU_RS28140	0.42	-0.9
6,266,379	+		PFLU_RS28140	0.42	-0.1
6,266,379	+		PFLU_RS28140	0.42	+0.5
6,266,380	-		PFLU_RS28140	0.43	-0.3
6,266,380	-		PFLU_RS28140	0.43	-0.3
6,266,380	-		PFLU_RS28140	0.43	-0.5
6,266,380	-		PFLU_RS28140	0.43	-2.5
6,266,383	+		PFLU_RS28140	0.43	+2.1
6,266,383	+		PFLU_RS28140	0.43	+0.2
6,266,384	-		PFLU_RS28140	0.43	-1.3
6,266,392	-		PFLU_RS28140	0.43	+1.4
6,266,392	-		PFLU_RS28140	0.43	+1.3
6,266,409	+		PFLU_RS28140	0.45	+0.5
6,266,409	+		PFLU_RS28140	0.45	-1.3
6,266,409	+		PFLU_RS28140	0.45	-0.2
6,266,410	-		PFLU_RS28140	0.45	+0.5
6,266,440	+		PFLU_RS28140	0.47	-1.6
6,266,441	-		PFLU_RS28140	0.47	+0.2
6,266,441	-		PFLU_RS28140	0.47	+1.5
6,266,504	+		PFLU_RS28140	0.52	-1.7
6,266,504	+		PFLU_RS28140	0.52	+0.5
6,266,504	+		PFLU_RS28140	0.52	+2.3
6,266,504	+		PFLU_RS28140	0.52	-2.1
6,266,504	+		PFLU_RS28140	0.52	+0.4
6,266,505	-		PFLU_RS28140	0.52	-1.4
6,266,505	-		PFLU_RS28140	0.52	-1.7
6,266,505	-		PFLU_RS28140	0.52	+0.2
6,266,505	-		PFLU_RS28140	0.52	-1.7
6,266,505	-		PFLU_RS28140	0.52	+0.2