Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27775

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
6,181,155	+		PFLU_RS27765	0.80	+2.6
6,181,155	+		PFLU_RS27765	0.80	-0.7
6,181,155	+		PFLU_RS27765	0.80	-0.7
6,181,155	+		PFLU_RS27765	0.80	-0.4
6,181,155	+		PFLU_RS27765	0.80	-0.6
6,181,155	+		PFLU_RS27765	0.80	+1.7
6,181,155	+		PFLU_RS27765	0.80	+0.8
6,181,155	+		PFLU_RS27765	0.80	-1.3
6,181,155	+		PFLU_RS27765	0.80	-0.2
6,181,155	+		PFLU_RS27765	0.80	-0.3
6,181,155	+		PFLU_RS27765	0.80	+0.8
6,181,155	+		PFLU_RS27765	0.80	-1.0
6,181,156	-		PFLU_RS27765	0.80	-1.2
6,181,156	-		PFLU_RS27765	0.80	+1.0
6,181,156	-		PFLU_RS27765	0.80	+0.8
6,181,156	-		PFLU_RS27765	0.80	-1.0
6,181,156	-		PFLU_RS27765	0.80	-2.0
6,181,156	-		PFLU_RS27765	0.80	-3.1
6,181,156	-		PFLU_RS27765	0.80	+0.7
6,181,156	-		PFLU_RS27765	0.80	+0.5
6,181,156	-		PFLU_RS27765	0.80	-0.1
6,181,159	+		PFLU_RS27765	0.80	-1.1
6,181,159	+		PFLU_RS27765	0.80	-0.1
6,181,160	-		PFLU_RS27765	0.80	-0.7
6,181,160	-		PFLU_RS27765	0.80	-0.4
6,181,160	-		PFLU_RS27765	0.80	-0.9
6,181,160	-		PFLU_RS27765	0.80	-1.3
6,181,221	+		PFLU_RS27765	0.85	-2.3
6,181,222	-		PFLU_RS27765	0.85	+0.9
6,181,222	-		PFLU_RS27765	0.85	+0.3
6,181,399	+				-1.3
6,181,400	-				+3.0
6,181,410	+				-0.1
6,181,410	+				-0.1
6,181,410	+				+0.2
6,181,410	+				-1.3
6,181,410	+				-0.2
6,181,410	+				+0.7
6,181,410	+				-0.2
6,181,410	+				-2.1
6,181,410	+				+1.1
6,181,410	+				-1.6
6,181,410	+				+1.2
6,181,410	+				+0.3
6,181,411	-				+0.3
6,181,411	-				+2.2
6,181,411	-				+2.3
6,181,411	-				+0.2
6,181,411	-				-0.5
6,181,411	-				+1.5
6,181,411	-				-1.0
6,181,411	-				+0.2
6,181,411	-				+0.1
6,181,411	-				+0.8
6,181,411	-				-1.0
6,181,460	+				+0.4
6,181,460	+				+0.2
6,181,460	+				-0.4
6,181,460	+				+0.5
6,181,460	+				+0.5
6,181,461	-				+1.8
6,181,461	-				-1.0
6,181,461	-				+1.7
6,181,466	+				+1.7
6,181,762	-		PFLU_RS27770	0.48	+0.8
6,181,817	+		PFLU_RS27770	0.56	+1.6
6,181,817	+		PFLU_RS27770	0.56	+1.5
6,181,817	+		PFLU_RS27770	0.56	-0.6
6,181,817	+		PFLU_RS27770	0.56	+1.2
6,181,817	+		PFLU_RS27770	0.56	-1.4
6,181,817	+		PFLU_RS27770	0.56	+0.1
6,181,818	-		PFLU_RS27770	0.56	-0.1
6,181,818	-		PFLU_RS27770	0.56	+2.2
6,181,818	-		PFLU_RS27770	0.56	+0.3
6,181,818	-		PFLU_RS27770	0.56	+0.7
6,181,818	-		PFLU_RS27770	0.56	-0.5
6,181,818	-		PFLU_RS27770	0.56	-1.1
6,181,818	-		PFLU_RS27770	0.56	+0.7
6,181,818	-		PFLU_RS27770	0.56	-1.0
6,181,818	-		PFLU_RS27770	0.56	-1.6
6,181,818	-		PFLU_RS27770	0.56	+2.3
6,182,057	-				-2.4
6,182,144	+				-1.6
6,182,144	+				+0.1
6,182,144	+				+0.3
6,182,145	-				+2.3
6,182,161	+				+0.5
6,182,210	+		PFLU_RS27775	0.18	+0.5
6,182,211	-		PFLU_RS27775	0.18	-0.6
6,182,378	+		PFLU_RS27775	0.52	+0.3
6,182,379	-		PFLU_RS27775	0.52	+0.7
6,182,379	-		PFLU_RS27775	0.52	+1.8
6,182,385	+		PFLU_RS27775	0.53	-1.5
6,182,385	+		PFLU_RS27775	0.53	-1.1
6,182,386	-		PFLU_RS27775	0.53	-0.2
6,182,386	-		PFLU_RS27775	0.53	+2.4
6,182,537	+		PFLU_RS27775	0.83	+0.7
6,182,537	+		PFLU_RS27775	0.83	-0.8
6,182,537	+		PFLU_RS27775	0.83	-0.6
6,182,537	+		PFLU_RS27775	0.83	+2.7
6,182,537	+		PFLU_RS27775	0.83	+1.3
6,182,537	+		PFLU_RS27775	0.83	+0.9
6,182,538	-		PFLU_RS27775	0.84	+3.5
6,182,538	-		PFLU_RS27775	0.84	-1.8
6,182,538	-		PFLU_RS27775	0.84	-0.2
6,182,538	-		PFLU_RS27775	0.84	+0.4
6,182,538	-		PFLU_RS27775	0.84	-0.4
6,182,538	-		PFLU_RS27775	0.84	-0.4
6,182,538	-		PFLU_RS27775	0.84	-0.2
6,182,538	-		PFLU_RS27775	0.84	-1.4
6,182,538	-		PFLU_RS27775	0.84	-2.3
6,182,538	-		PFLU_RS27775	0.84	-0.1
6,182,538	-		PFLU_RS27775	0.84	+0.3
6,182,538	-		PFLU_RS27775	0.84	-2.1
6,182,538	-		PFLU_RS27775	0.84	+0.7
6,182,538	-		PFLU_RS27775	0.84	-0.7
6,182,538	-		PFLU_RS27775	0.84	-0.5
6,182,553	-		PFLU_RS27775	0.87	-2.6
6,182,553	-		PFLU_RS27775	0.87	+0.8
6,182,553	-		PFLU_RS27775	0.87	-2.0
6,182,643	+				+0.0
6,182,643	+				+2.2
6,182,644	-				+1.5
6,182,644	-				+0.8
6,182,654	+				+1.3
6,182,674	+				-0.8
6,182,674	+				-2.0
6,182,674	+				+1.1
6,182,674	+				+1.3
6,182,674	+				+0.3
6,182,674	+				+0.5
6,182,674	+				+0.6
6,182,674	+				+0.5
6,182,674	+				-0.3
6,182,674	+				+1.3
6,182,674	+				-0.8
6,182,674	+				+1.5
6,182,674	+				+1.8
6,182,674	+				-1.8
6,182,674	+				+2.7
6,182,674	+				+2.5
6,182,674	+				+0.5
6,182,674	+				+1.7
6,182,675	-				+2.5
6,182,675	-				+2.5
6,182,675	-				+0.4
6,182,675	-				+0.3
6,182,675	-				+1.5
6,182,675	-				+0.9
6,182,675	-				-0.3
6,182,675	-				+1.0
6,182,675	-				-0.4
6,182,675	-				+2.8
6,182,675	-				+0.2
6,182,675	-				-0.4
6,182,675	-				-2.0
6,182,675	-				-1.2
6,182,678	+				+0.3
6,182,678	+				+0.2
6,182,678	+				-1.5
6,182,679	-				+1.0
6,182,679	-				-0.4
6,182,679	-				-1.7
6,182,742	+				-1.3
6,182,743	-				-0.8
6,182,743	-				+0.5
6,182,743	-				-1.0
6,182,757	+				-1.0
6,182,758	-				-2.1
6,182,758	-				+1.1
6,182,758	-				-2.0
6,182,788	+				-0.4
6,182,788	+				+0.7
6,182,788	+				-0.4
6,182,788	+				-0.8
6,182,788	+				+0.5
6,182,788	+				-0.4
6,182,788	+				+1.8
6,182,788	+				-0.5
6,182,788	+				+0.9
6,182,788	+				+0.9
6,182,789	-				+0.9
6,182,789	-				-0.8
6,182,789	-				+1.2
6,182,789	-				+1.2
6,182,789	-				+1.1
6,182,789	-				-1.7
6,182,789	-				-0.2
6,182,792	+				-0.8
6,182,792	+				-0.3
6,182,792	+				-0.5
6,182,792	+				-0.7
6,182,792	+				-2.5
6,182,792	+				+1.8
6,182,793	-				-0.7
6,182,793	-				-0.5
6,182,793	-				+0.0
6,182,793	-				-0.8
6,182,793	-				+0.1
6,182,857	+				-0.1
6,182,858	-				-1.3
6,182,890	+		PFLU_RS27780	0.11	-0.8
6,182,890	+		PFLU_RS27780	0.11	-2.5
6,182,891	-		PFLU_RS27780	0.11	-0.2
6,182,891	-		PFLU_RS27780	0.11	-1.0
6,182,916	+		PFLU_RS27780	0.14	-0.6
6,182,916	+		PFLU_RS27780	0.14	-0.2
6,182,916	+		PFLU_RS27780	0.14	-0.9
6,182,916	+		PFLU_RS27780	0.14	-2.0
6,182,916	+		PFLU_RS27780	0.14	-0.3
6,182,916	+		PFLU_RS27780	0.14	-1.9
6,182,916	+		PFLU_RS27780	0.14	+2.1
6,182,916	+		PFLU_RS27780	0.14	-0.1
6,182,916	+		PFLU_RS27780	0.14	-1.4
6,182,916	+		PFLU_RS27780	0.14	-1.1
6,182,916	+		PFLU_RS27780	0.14	+0.6
6,182,916	+		PFLU_RS27780	0.14	+1.0
6,182,916	+		PFLU_RS27780	0.14	-0.0
6,182,916	+		PFLU_RS27780	0.14	-0.4
6,182,916	+		PFLU_RS27780	0.14	+0.6
6,182,917	-		PFLU_RS27780	0.14	-1.5
6,182,917	-		PFLU_RS27780	0.14	+0.5
6,182,917	-		PFLU_RS27780	0.14	-0.6
6,182,917	-		PFLU_RS27780	0.14	-0.6
6,182,917	-		PFLU_RS27780	0.14	-1.5
6,182,917	-		PFLU_RS27780	0.14	-0.5
6,182,917	-		PFLU_RS27780	0.14	+4.3
6,182,917	-		PFLU_RS27780	0.14	-1.2
6,182,917	-		PFLU_RS27780	0.14	-2.4
6,182,917	-		PFLU_RS27780	0.14	+0.1
6,182,917	-		PFLU_RS27780	0.14	+1.3
6,182,917	-		PFLU_RS27780	0.14	+1.2
6,182,917	-		PFLU_RS27780	0.14	-0.1
6,182,917	-		PFLU_RS27780	0.14	+1.4
6,182,917	-		PFLU_RS27780	0.14	-0.8
6,182,917	-		PFLU_RS27780	0.14	-0.8
6,182,917	-		PFLU_RS27780	0.14	-1.1
6,182,917	-		PFLU_RS27780	0.14	-2.0
6,182,917	-		PFLU_RS27780	0.14	+1.1
6,183,042	+		PFLU_RS27780	0.28	-1.8
6,183,042	+		PFLU_RS27780	0.28	-0.7
6,183,042	+		PFLU_RS27780	0.28	-0.3
6,183,043	-		PFLU_RS27780	0.28	-1.1
6,183,043	-		PFLU_RS27780	0.28	+0.7
6,183,043	-		PFLU_RS27780	0.28	+2.1
6,183,043	-		PFLU_RS27780	0.28	+0.3
6,183,207	+		PFLU_RS27780	0.47	-0.9
6,183,208	-		PFLU_RS27780	0.47	+2.5
6,183,315	+		PFLU_RS27780	0.59	+0.5
6,183,315	+		PFLU_RS27780	0.59	-0.8
6,183,315	+		PFLU_RS27780	0.59	+0.3
6,183,315	+		PFLU_RS27780	0.59	-3.4
6,183,316	-		PFLU_RS27780	0.59	-1.4
6,183,345	-		PFLU_RS27780	0.62	-1.0
6,183,465	+		PFLU_RS27780	0.76	-1.5
6,183,466	-		PFLU_RS27780	0.76	-2.8
6,183,576	+		PFLU_RS27780	0.88	+0.9