Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27585

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
6,136,943	+				-1.4
6,136,943	+				-0.4
6,136,943	+				+0.4
6,136,943	+				-2.2
6,136,943	+				+1.0
6,136,943	+				-0.4
6,136,943	+				+0.1
6,136,943	+				+0.9
6,136,943	+				+0.0
6,136,943	+				+1.5
6,136,943	+				+0.9
6,136,943	+				-2.0
6,136,943	+				+0.3
6,136,943	+				+0.4
6,136,943	+				+3.7
6,136,944	-				+0.4
6,136,944	-				-1.7
6,136,944	-				+1.6
6,136,944	-				+1.9
6,136,944	-				-1.3
6,136,944	-				-2.2
6,136,944	-				+1.3
6,136,944	-				+0.4
6,136,944	-				+2.0
6,136,944	-				-1.8
6,136,944	-				-0.2
6,136,944	-				+0.2
6,136,944	-				-0.1
6,136,944	-				+0.7
6,136,944	-				-0.4
6,136,944	-				-0.3
6,136,944	-				+0.8
6,136,944	-				-0.7
6,136,944	-				+1.5
6,136,944	-				-0.3
6,136,944	-				-0.1
6,136,944	-				-1.8
6,136,949	-				+1.8
6,136,949	-				+1.0
6,136,962	-		PFLU_RS27575	0.11	+0.0
6,136,962	-		PFLU_RS27575	0.11	+0.9
6,136,976	+		PFLU_RS27575	0.13	-1.1
6,136,976	+		PFLU_RS27575	0.13	+1.2
6,136,976	+		PFLU_RS27575	0.13	-0.8
6,136,976	+		PFLU_RS27575	0.13	+1.9
6,136,976	+		PFLU_RS27575	0.13	-0.2
6,136,976	+		PFLU_RS27575	0.13	+1.3
6,136,976	+		PFLU_RS27575	0.13	-1.8
6,136,976	+		PFLU_RS27575	0.13	+0.2
6,136,977	-		PFLU_RS27575	0.13	+0.2
6,136,977	-		PFLU_RS27575	0.13	-0.2
6,136,977	-		PFLU_RS27575	0.13	+1.9
6,136,977	-		PFLU_RS27575	0.13	-1.8
6,136,977	-		PFLU_RS27575	0.13	-1.9
6,136,977	-		PFLU_RS27575	0.13	-0.8
6,137,030	+		PFLU_RS27575	0.20	+1.4
6,137,030	+		PFLU_RS27575	0.20	+1.3
6,137,030	+		PFLU_RS27575	0.20	-2.0
6,137,031	-		PFLU_RS27575	0.20	+1.2
6,137,031	-		PFLU_RS27575	0.20	-0.8
6,137,031	-		PFLU_RS27575	0.20	-0.6
6,137,031	-		PFLU_RS27575	0.20	+0.8
6,137,031	-		PFLU_RS27575	0.20	-1.6
6,137,033	+		PFLU_RS27575	0.20	+0.9
6,137,033	+		PFLU_RS27575	0.20	+0.3
6,137,034	-		PFLU_RS27575	0.20	+2.5
6,137,034	-		PFLU_RS27575	0.20	-2.3
6,137,034	-		PFLU_RS27575	0.20	-1.6
6,137,034	-		PFLU_RS27575	0.20	+1.0
6,137,170	-		PFLU_RS27575	0.39	-1.6
6,137,170	-		PFLU_RS27575	0.39	+1.9
6,137,258	+		PFLU_RS27575	0.50	-1.8
6,137,258	+		PFLU_RS27575	0.50	-0.1
6,137,258	+		PFLU_RS27575	0.50	-0.1
6,137,258	+		PFLU_RS27575	0.50	+1.3
6,137,258	+		PFLU_RS27575	0.50	-0.5
6,137,258	+		PFLU_RS27575	0.50	-0.4
6,137,258	+		PFLU_RS27575	0.50	-0.4
6,137,258	+		PFLU_RS27575	0.50	-1.5
6,137,258	+		PFLU_RS27575	0.50	-2.6
6,137,259	-		PFLU_RS27575	0.50	+1.4
6,137,259	-		PFLU_RS27575	0.50	-0.6
6,137,259	-		PFLU_RS27575	0.50	+2.0
6,137,259	-		PFLU_RS27575	0.50	-2.1
6,137,259	-		PFLU_RS27575	0.50	-0.7
6,137,370	-		PFLU_RS27575	0.65	+1.2
6,137,399	+		PFLU_RS27575	0.69	-1.4
6,137,399	+		PFLU_RS27575	0.69	+0.1
6,137,399	+		PFLU_RS27575	0.69	+0.7
6,137,399	+		PFLU_RS27575	0.69	-0.8
6,137,399	+		PFLU_RS27575	0.69	+1.6
6,137,399	+		PFLU_RS27575	0.69	+1.0
6,137,399	+		PFLU_RS27575	0.69	+2.1
6,137,400	-		PFLU_RS27575	0.69	-1.5
6,137,400	-		PFLU_RS27575	0.69	+1.3
6,137,400	-		PFLU_RS27575	0.69	-0.2
6,137,400	-		PFLU_RS27575	0.69	+0.1
6,137,400	-		PFLU_RS27575	0.69	-0.4
6,137,400	-		PFLU_RS27575	0.69	+0.2
6,137,400	-		PFLU_RS27575	0.69	+1.1
6,137,400	-		PFLU_RS27575	0.69	-2.0
6,137,468	+		PFLU_RS27575	0.78	-0.1
6,137,468	+		PFLU_RS27575	0.78	-0.5
6,137,468	+		PFLU_RS27575	0.78	+0.9
6,137,468	+		PFLU_RS27575	0.78	-1.8
6,137,468	+		PFLU_RS27575	0.78	+1.6
6,137,468	+		PFLU_RS27575	0.78	+1.6
6,137,468	+		PFLU_RS27575	0.78	-0.2
6,137,468	+		PFLU_RS27575	0.78	-0.8
6,137,468	+		PFLU_RS27575	0.78	+1.0
6,137,469	-		PFLU_RS27575	0.78	-1.8
6,137,469	-		PFLU_RS27575	0.78	-0.8
6,137,469	-		PFLU_RS27575	0.78	-1.9
6,137,469	-		PFLU_RS27575	0.78	+0.5
6,137,469	-		PFLU_RS27575	0.78	+0.4
6,137,469	-		PFLU_RS27575	0.78	+0.4
6,137,469	-		PFLU_RS27575	0.78	+0.8
6,137,469	-		PFLU_RS27575	0.78	-0.2
6,137,469	-		PFLU_RS27575	0.78	+0.7
6,137,469	-		PFLU_RS27575	0.78	-1.4
6,137,469	-		PFLU_RS27575	0.78	-0.1
6,137,469	-		PFLU_RS27575	0.78	+0.7
6,137,469	-		PFLU_RS27575	0.78	+0.3
6,137,469	-		PFLU_RS27575	0.78	+0.2
6,137,561	+				+0.5
6,137,561	+				+0.3
6,137,562	-				+2.6
6,137,562	-				+0.9
6,137,562	-				+4.8
6,137,614	+				+1.6
6,137,629	-				+1.2
6,137,629	-				+1.1
6,137,629	-				-0.1
6,137,652	-				-0.8
6,137,677	+		PFLU_RS27580	0.17	-1.0
6,137,678	-		PFLU_RS27580	0.18	+0.3
6,137,678	-		PFLU_RS27580	0.18	-2.7
6,137,678	-		PFLU_RS27580	0.18	-1.4
6,137,683	+		PFLU_RS27580	0.20	-1.2
6,137,951	+				+1.7
6,137,951	+				+2.7
6,137,951	+				+1.0
6,137,951	+				-1.1
6,137,952	-				-1.2
6,137,952	-				-1.4
6,137,952	-				-0.1
6,137,952	-				+0.9
6,137,952	-				-2.2
6,137,952	-				-1.3
6,137,952	-				-2.0
6,137,975	+				-1.6
6,137,976	-				+0.3
6,137,976	-				-0.5
6,138,155	+		PFLU_RS27585	0.23	+1.1
6,138,155	+		PFLU_RS27585	0.23	-0.2
6,138,155	+		PFLU_RS27585	0.23	-2.3
6,138,155	+		PFLU_RS27585	0.23	-0.2
6,138,155	+		PFLU_RS27585	0.23	-2.3
6,138,155	+		PFLU_RS27585	0.23	+0.5
6,138,155	+		PFLU_RS27585	0.23	+1.7
6,138,155	+		PFLU_RS27585	0.23	-1.0
6,138,156	-		PFLU_RS27585	0.23	+1.1
6,138,156	-		PFLU_RS27585	0.23	-1.0
6,138,156	-		PFLU_RS27585	0.23	+0.7
6,138,156	-		PFLU_RS27585	0.23	+1.2
6,138,156	-		PFLU_RS27585	0.23	+4.1
6,138,382	+		PFLU_RS27585	0.43	-0.5
6,138,415	+		PFLU_RS27585	0.46	-0.5
6,138,415	+		PFLU_RS27585	0.46	+0.6
6,138,415	+		PFLU_RS27585	0.46	+0.6
6,138,415	+		PFLU_RS27585	0.46	-0.1
6,138,415	+		PFLU_RS27585	0.46	-0.3
6,138,415	+		PFLU_RS27585	0.46	-2.3
6,138,415	+		PFLU_RS27585	0.46	+2.5
6,138,415	+		PFLU_RS27585	0.46	+0.4
6,138,415	+		PFLU_RS27585	0.46	-1.2
6,138,416	-		PFLU_RS27585	0.46	-3.2
6,138,416	-		PFLU_RS27585	0.46	+1.6
6,138,416	-		PFLU_RS27585	0.46	+1.9
6,138,416	-		PFLU_RS27585	0.46	-0.7
6,138,416	-		PFLU_RS27585	0.46	+2.0
6,138,416	-		PFLU_RS27585	0.46	+0.5
6,138,416	-		PFLU_RS27585	0.46	+1.4
6,138,438	+		PFLU_RS27585	0.48	-2.2
6,138,438	+		PFLU_RS27585	0.48	+0.9
6,138,438	+		PFLU_RS27585	0.48	+0.8
6,138,439	-		PFLU_RS27585	0.48	+1.7
6,138,439	-		PFLU_RS27585	0.48	-1.2
6,138,439	-		PFLU_RS27585	0.48	+1.4
6,138,439	-		PFLU_RS27585	0.48	+0.3
6,138,461	+		PFLU_RS27585	0.50	-2.5
6,138,461	+		PFLU_RS27585	0.50	-0.6
6,138,461	+		PFLU_RS27585	0.50	-1.8
6,138,461	+		PFLU_RS27585	0.50	-1.4
6,138,461	+		PFLU_RS27585	0.50	+1.5
6,138,462	-		PFLU_RS27585	0.50	+1.7
6,138,462	-		PFLU_RS27585	0.50	-0.2
6,138,462	-		PFLU_RS27585	0.50	-0.5
6,138,462	-		PFLU_RS27585	0.50	+2.2
6,138,542	+		PFLU_RS27585	0.57	-1.2
6,138,603	-		PFLU_RS27585	0.62	+1.3
6,138,605	+		PFLU_RS27585	0.63	-2.2
6,138,605	+		PFLU_RS27585	0.63	+0.5
6,138,605	+		PFLU_RS27585	0.63	+0.7
6,138,605	+		PFLU_RS27585	0.63	+0.5
6,138,606	-		PFLU_RS27585	0.63	+1.1
6,138,606	-		PFLU_RS27585	0.63	+1.5
6,138,606	-		PFLU_RS27585	0.63	+1.6
6,138,606	-		PFLU_RS27585	0.63	+0.5
6,138,646	+		PFLU_RS27585	0.66	+0.1
6,138,647	-		PFLU_RS27585	0.66	+1.9
6,138,756	-		PFLU_RS27585	0.76	-0.9
6,139,052	+		PFLU_RS31180	0.12	+2.2
6,139,052	+		PFLU_RS31180	0.12	-2.2
6,139,052	+		PFLU_RS31180	0.12	+0.9
6,139,052	+		PFLU_RS31180	0.12	-0.9
6,139,052	+		PFLU_RS31180	0.12	+0.3
6,139,052	+		PFLU_RS31180	0.12	+1.6
6,139,052	+		PFLU_RS31180	0.12	-0.7
6,139,052	+		PFLU_RS31180	0.12	-0.1
6,139,052	+		PFLU_RS31180	0.12	-1.4
6,139,052	+		PFLU_RS31180	0.12	-0.7
6,139,053	-		PFLU_RS31180	0.13	+2.0
6,139,053	-		PFLU_RS31180	0.13	+1.1
6,139,053	-		PFLU_RS31180	0.13	-0.3
6,139,053	-		PFLU_RS31180	0.13	+1.7
6,139,053	-		PFLU_RS31180	0.13	-0.9
6,139,053	-		PFLU_RS31180	0.13	+0.9
6,139,079	+		PFLU_RS31180	0.29	+1.3
6,139,079	+		PFLU_RS31180	0.29	-0.1
6,139,080	-		PFLU_RS31180	0.30	+1.7
6,139,080	-		PFLU_RS31180	0.30	-0.9
6,139,101	+		PFLU_RS31180	0.43	-1.9
6,139,102	-		PFLU_RS31180	0.43	-0.9
6,139,176	+				+0.8
6,139,176	+				+1.1
6,139,177	-				+0.6
6,139,177	-				-1.3
6,139,228	+				+1.9
6,139,228	+				-1.2
6,139,228	+				-0.2
6,139,228	+				+1.3
6,139,229	-				+0.1
6,139,229	-				-0.5
6,139,229	-				-3.1
6,139,229	-				+0.3
6,139,229	-				-2.8
6,139,229	-				+0.9
6,139,229	-				-2.5
6,139,229	-				-1.1
6,139,229	-				-0.9
6,139,229	-				-0.9
6,139,229	-				+0.1
6,139,229	-				-1.9
6,139,229	-				+1.5
6,139,229	-				-1.0
6,139,229	-				+0.1
6,139,232	+				+1.1
6,139,232	+				-1.1
6,139,232	+				+1.5
6,139,232	+				-1.4
6,139,233	-				+2.1
6,139,233	-				+0.1
6,139,233	-				-0.6
6,139,294	+				-2.2
6,139,294	+				-1.4
6,139,294	+				-1.0
6,139,294	+				-0.8
6,139,295	-				-0.7
6,139,295	-				-0.7
6,139,295	-				+1.5
6,139,295	-				-1.4
6,139,347	+				-0.4
6,139,347	+				-1.1
6,139,347	+				-1.4
6,139,348	-				-1.3
6,139,348	-				-1.1
6,139,370	+				-1.4
6,139,371	-				+2.5
6,139,378	+				+0.9
6,139,378	+				+1.1
6,139,378	+				+1.8
6,139,379	-				-1.3
6,139,525	-		PFLU_RS27595	0.12	+1.9
6,139,555	-		PFLU_RS27595	0.14	+0.0
6,139,555	-		PFLU_RS27595	0.14	-0.7
6,139,666	+		PFLU_RS27595	0.23	+0.5
6,139,666	+		PFLU_RS27595	0.23	+0.1
6,139,666	+		PFLU_RS27595	0.23	+0.2
6,139,667	-		PFLU_RS27595	0.23	+0.5
6,139,702	+		PFLU_RS27595	0.26	+1.0
6,139,702	+		PFLU_RS27595	0.26	-1.2
6,139,702	+		PFLU_RS27595	0.26	+0.7
6,139,703	-		PFLU_RS27595	0.26	+0.3
6,139,703	-		PFLU_RS27595	0.26	-0.3
6,139,703	-		PFLU_RS27595	0.26	-1.4
6,139,703	-		PFLU_RS27595	0.26	-2.7
6,139,716	-		PFLU_RS27595	0.27	-0.3
6,139,722	+		PFLU_RS27595	0.27	+0.2
6,139,722	+		PFLU_RS27595	0.27	-0.1
6,139,722	+		PFLU_RS27595	0.27	-1.5
6,139,875	+		PFLU_RS27595	0.39	+0.9
6,139,875	+		PFLU_RS27595	0.39	-1.3
6,139,875	+		PFLU_RS27595	0.39	+0.6
6,139,875	+		PFLU_RS27595	0.39	-2.1
6,139,875	+		PFLU_RS27595	0.39	-0.1
6,139,875	+		PFLU_RS27595	0.39	-0.7
6,139,876	-		PFLU_RS27595	0.39	+0.2
6,139,876	-		PFLU_RS27595	0.39	+0.5
6,139,876	-		PFLU_RS27595	0.39	-0.4
6,139,876	-		PFLU_RS27595	0.39	-0.1
6,139,876	-		PFLU_RS27595	0.39	+0.9
6,139,882	+		PFLU_RS27595	0.40	-1.9
6,139,883	-		PFLU_RS27595	0.40	+0.4
6,139,917	+		PFLU_RS27595	0.43	+1.8
6,139,917	+		PFLU_RS27595	0.43	-0.3
6,139,917	+		PFLU_RS27595	0.43	+0.2
6,139,918	-		PFLU_RS27595	0.43	+1.5
6,139,918	-		PFLU_RS27595	0.43	+1.1
6,139,918	-		PFLU_RS27595	0.43	-1.4
6,139,990	+		PFLU_RS27595	0.48	-2.6
6,139,990	+		PFLU_RS27595	0.48	-1.5
6,139,990	+		PFLU_RS27595	0.48	-2.7
6,139,990	+		PFLU_RS27595	0.48	-2.7
6,139,991	-		PFLU_RS27595	0.48	-1.5
6,139,991	-		PFLU_RS27595	0.48	-1.4
6,139,991	-		PFLU_RS27595	0.48	+0.1
6,139,991	-		PFLU_RS27595	0.48	+0.9
6,139,991	-		PFLU_RS27595	0.48	-0.7
6,139,991	-		PFLU_RS27595	0.48	-0.9
6,139,991	-		PFLU_RS27595	0.48	+0.4
6,139,991	-		PFLU_RS27595	0.48	-0.3
6,139,991	-		PFLU_RS27595	0.48	+1.4
6,140,010	+		PFLU_RS27595	0.50	+0.2