Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16275

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
3,694,860	+		PFLU_RS16270	0.22	-1.9
3,694,861	-		PFLU_RS16270	0.22	-0.4
3,694,861	-		PFLU_RS16270	0.22	-1.0
3,694,901	+		PFLU_RS16270	0.26	+2.1
3,694,901	+		PFLU_RS16270	0.26	-0.9
3,694,901	+		PFLU_RS16270	0.26	-0.2
3,694,901	+		PFLU_RS16270	0.26	+0.8
3,694,902	-		PFLU_RS16270	0.26	-0.8
3,694,902	-		PFLU_RS16270	0.26	+1.2
3,694,902	-		PFLU_RS16270	0.26	-1.0
3,694,926	+		PFLU_RS16270	0.28	-1.4
3,694,927	-		PFLU_RS16270	0.28	+0.1
3,694,927	-		PFLU_RS16270	0.28	+1.8
3,694,927	-		PFLU_RS16270	0.28	+1.0
3,694,953	+		PFLU_RS16270	0.31	-1.2
3,694,954	-		PFLU_RS16270	0.31	-2.3
3,695,222	+		PFLU_RS16270	0.58	+0.3
3,695,222	+		PFLU_RS16270	0.58	+1.8
3,695,258	+		PFLU_RS16270	0.62	+1.0
3,695,258	+		PFLU_RS16270	0.62	+1.6
3,695,258	+		PFLU_RS16270	0.62	+0.3
3,695,258	+		PFLU_RS16270	0.62	+1.6
3,695,259	-		PFLU_RS16270	0.62	+0.2
3,695,268	+		PFLU_RS16270	0.63	-0.2
3,695,268	+		PFLU_RS16270	0.63	-0.0
3,695,268	+		PFLU_RS16270	0.63	+0.1
3,695,271	+		PFLU_RS16270	0.63	-1.2
3,695,272	-		PFLU_RS16270	0.63	+0.2
3,695,337	+		PFLU_RS16270	0.69	+2.8
3,695,463	-		PFLU_RS16270	0.82	-1.2
3,695,472	+		PFLU_RS16270	0.83	-0.3
3,695,472	+		PFLU_RS16270	0.83	+2.1
3,695,473	-		PFLU_RS16270	0.83	-0.8
3,695,476	+		PFLU_RS16270	0.83	+0.2
3,695,476	+		PFLU_RS16270	0.83	-0.2
3,695,476	+		PFLU_RS16270	0.83	+0.6
3,695,477	-		PFLU_RS16270	0.83	+0.2
3,695,477	-		PFLU_RS16270	0.83	-0.4
3,695,477	-		PFLU_RS16270	0.83	-0.2
3,695,477	-		PFLU_RS16270	0.83	+1.1
3,695,477	-		PFLU_RS16270	0.83	+0.5
3,695,508	+		PFLU_RS16270	0.87	-0.3
3,695,533	+		PFLU_RS16270	0.89	-0.8
3,695,560	+				+1.5
3,695,561	-				+1.3
3,695,561	-				-1.8
3,695,591	+				-0.5
3,695,591	+				-2.7
3,695,591	+				-1.2
3,695,591	+				-0.2
3,695,592	-				+1.8
3,695,592	-				+1.4
3,695,592	-				-0.2
3,695,592	-				-0.4
3,695,629	+				-0.5
3,695,629	+				-0.4
3,695,630	-				+0.2
3,695,630	-				-1.4
3,695,639	+				+1.5
3,695,639	+				+1.3
3,695,639	+				+1.2
3,695,639	+				+2.2
3,695,639	+				+0.2
3,695,639	+				+0.2
3,695,639	+				+0.2
3,695,639	+				-0.6
3,695,639	+				+1.2
3,695,639	+				-1.4
3,695,640	-				-1.2
3,695,640	-				+0.3
3,695,640	-				-1.7
3,695,640	-				+1.8
3,695,640	-				+0.9
3,695,643	+				+0.2
3,695,643	+				-0.1
3,695,643	+				-0.7
3,695,643	+				-0.5
3,695,708	+				-0.7
3,695,708	+				-1.0
3,695,708	+				-2.0
3,695,708	+				-0.8
3,695,708	+				+0.9
3,695,708	+				+0.5
3,695,708	+				-1.4
3,695,708	+				-0.2
3,695,708	+				-1.0
3,695,708	+				+0.4
3,695,709	-				+1.8
3,695,709	-				-1.8
3,695,709	-				+0.0
3,695,709	-				-0.2
3,695,782	+				+1.8
3,695,794	-		PFLU_RS16275	0.11	-1.7
3,695,902	+		PFLU_RS16275	0.24	-2.4
3,695,902	+		PFLU_RS16275	0.24	+1.6
3,695,902	+		PFLU_RS16275	0.24	+1.6
3,695,903	-		PFLU_RS16275	0.25	-0.8
3,695,939	+		PFLU_RS16275	0.29	-0.4
3,696,049	+		PFLU_RS16275	0.43	+0.6
3,696,135	+		PFLU_RS16275	0.53	+0.2
3,696,136	-		PFLU_RS16275	0.53	+0.6
3,696,235	+		PFLU_RS16275	0.65	+1.4
3,696,235	+		PFLU_RS16275	0.65	+0.5
3,696,235	+		PFLU_RS16275	0.65	+0.2
3,696,235	+		PFLU_RS16275	0.65	-0.9
3,696,235	+		PFLU_RS16275	0.65	-0.1
3,696,236	-		PFLU_RS16275	0.66	+2.5
3,696,289	-		PFLU_RS16275	0.72	+0.8
3,696,361	+		PFLU_RS16275	0.81	-0.1
3,696,361	+		PFLU_RS16275	0.81	+0.5
3,696,376	+		PFLU_RS16275	0.83	+0.4
3,696,376	+		PFLU_RS16275	0.83	+0.9
3,696,376	+		PFLU_RS16275	0.83	-1.4
3,696,376	+		PFLU_RS16275	0.83	+0.6
3,696,479	+				-0.6
3,696,479	+				+1.8
3,696,479	+				+0.6
3,696,479	+				-0.6
3,696,480	-				-1.9
3,696,480	-				-1.5
3,696,480	-				-1.4
3,696,480	-				+4.0
3,696,551	+				+1.1
3,696,552	-				+0.6
3,696,579	+				-2.3
3,696,579	+				-1.2
3,696,638	+				+0.5
3,696,639	-				-1.2
3,696,658	-				+1.8
3,696,674	-				+0.2
3,696,756	+				-1.5
3,696,761	+				-0.5
3,696,786	+				+1.8
3,696,787	-				-0.8
3,696,787	-				+1.4
3,696,787	-				-0.6
3,696,806	+				+0.8
3,696,806	+				-0.2
3,696,822	+				+0.2
3,696,823	-				-2.2
3,696,823	-				+0.2
3,696,846	+				+0.2
3,696,847	-				-0.8
3,696,847	-				+1.2
3,696,847	-				+0.3
3,696,870	+				+0.5
3,696,870	+				+0.7
3,696,870	+				+1.8
3,696,871	-				+1.5
3,696,871	-				+1.2
3,696,889	-				+1.5
3,696,889	-				+1.2
3,696,918	-				+0.2
3,696,946	-				-0.2
3,696,946	-				+4.4
3,696,946	-				+2.2
3,696,955	+				-0.8
3,696,955	+				+0.6
3,696,955	+				-1.5
3,696,955	+				-0.8
3,696,956	-				-2.5
3,696,956	-				+1.1
3,696,956	-				+1.2
3,696,956	-				-1.2
3,696,956	-				+1.0
3,696,956	-				+2.4
3,696,956	-				+2.8
3,696,957	+				+0.2
3,696,957	+				+1.1
3,696,957	+				+0.3
3,696,958	-				+0.6
3,696,958	-				+2.5
3,696,970	-				+3.9
3,696,970	-				+2.3
3,696,986	+				+1.8
3,696,987	-				-1.0
3,696,989	+				-0.5
3,696,990	-				+1.4
3,696,990	-				+2.6
3,696,990	-				-2.1
3,696,990	-				+1.8
3,696,990	-				+1.5
3,696,990	-				-0.4
3,697,009	+				-1.8
3,697,062	+				-0.2
3,697,062	+				+0.1
3,697,062	+				-0.4
3,697,062	+				-1.0
3,697,062	+				-0.5
3,697,062	+				-0.8
3,697,062	+				-0.2
3,697,063	-				+0.2
3,697,063	-				+1.1
3,697,063	-				-0.4
3,697,063	-				+1.3
3,697,063	-				-0.2
3,697,063	-				+0.2
3,697,079	+				+0.8
3,697,079	+				-0.0
3,697,079	+				+3.3
3,697,079	+				+0.8
3,697,079	+				-1.0
3,697,079	+				+1.2
3,697,079	+				-0.5
3,697,079	+				+2.8
3,697,079	+				+0.6
3,697,080	-				-0.8
3,697,080	-				-3.1
3,697,080	-				-0.5
3,697,080	-				+2.2
3,697,080	-				-2.1
3,697,080	-				+0.8
3,697,087	+				+2.6
3,697,104	+				-0.2
3,697,264	+		PFLU_RS16280	0.31	+1.8
3,697,264	+		PFLU_RS16280	0.31	+1.8
3,697,264	+		PFLU_RS16280	0.31	-1.0
3,697,264	+		PFLU_RS16280	0.31	+3.4
3,697,264	+		PFLU_RS16280	0.31	-1.5
3,697,264	+		PFLU_RS16280	0.31	-0.5
3,697,264	+		PFLU_RS16280	0.31	+0.1
3,697,264	+		PFLU_RS16280	0.31	+1.1
3,697,264	+		PFLU_RS16280	0.31	-0.5
3,697,264	+		PFLU_RS16280	0.31	-1.4
3,697,264	+		PFLU_RS16280	0.31	+0.8
3,697,264	+		PFLU_RS16280	0.31	-2.9
3,697,264	+		PFLU_RS16280	0.31	-0.0
3,697,264	+		PFLU_RS16280	0.31	-0.2
3,697,265	-		PFLU_RS16280	0.31	-1.0
3,697,265	-		PFLU_RS16280	0.31	-2.2
3,697,265	-		PFLU_RS16280	0.31	+0.4
3,697,265	-		PFLU_RS16280	0.31	+0.4
3,697,265	-		PFLU_RS16280	0.31	+1.1
3,697,265	-		PFLU_RS16280	0.31	+2.8
3,697,265	-		PFLU_RS16280	0.31	-0.8
3,697,265	-		PFLU_RS16280	0.31	-2.2
3,697,266	+		PFLU_RS16280	0.31	+1.3
3,697,267	-		PFLU_RS16280	0.31	+2.8
3,697,267	-		PFLU_RS16280	0.31	-0.2
3,697,291	+		PFLU_RS16280	0.35	+0.2
3,697,297	+		PFLU_RS16280	0.36	-0.5
3,697,297	+		PFLU_RS16280	0.36	+1.8
3,697,299	+		PFLU_RS16280	0.36	+0.2
3,697,299	+		PFLU_RS16280	0.36	-2.0
3,697,299	+		PFLU_RS16280	0.36	+2.0
3,697,299	+		PFLU_RS16280	0.36	+2.2
3,697,299	+		PFLU_RS16280	0.36	+0.2
3,697,299	+		PFLU_RS16280	0.36	+0.6
3,697,299	+		PFLU_RS16280	0.36	-1.4
3,697,299	+		PFLU_RS16280	0.36	-1.7
3,697,299	+		PFLU_RS16280	0.36	+2.5
3,697,299	+		PFLU_RS16280	0.36	-0.1
3,697,299	+		PFLU_RS16280	0.36	-0.5
3,697,299	+		PFLU_RS16280	0.36	-0.3
3,697,300	-		PFLU_RS16280	0.36	-0.2
3,697,300	-		PFLU_RS16280	0.36	-1.7
3,697,300	-		PFLU_RS16280	0.36	+1.6
3,697,300	-		PFLU_RS16280	0.36	-0.5
3,697,300	-		PFLU_RS16280	0.36	-0.5
3,697,300	-		PFLU_RS16280	0.36	+1.3
3,697,300	-		PFLU_RS16280	0.36	-1.5
3,697,300	-		PFLU_RS16280	0.36	+1.3
3,697,300	-		PFLU_RS16280	0.36	+0.3
3,697,300	-		PFLU_RS16280	0.36	-1.4
3,697,300	-		PFLU_RS16280	0.36	+1.8
3,697,300	-		PFLU_RS16280	0.36	+0.2
3,697,300	-		PFLU_RS16280	0.36	+2.8
3,697,300	-		PFLU_RS16280	0.36	+2.8
3,697,300	-		PFLU_RS16280	0.36	-0.8
3,697,322	+		PFLU_RS16280	0.40	+0.7
3,697,322	+		PFLU_RS16280	0.40	+2.0
3,697,323	-		PFLU_RS16280	0.40	+0.4
3,697,323	-		PFLU_RS16280	0.40	+3.2
3,697,367	+		PFLU_RS16280	0.46	+3.6
3,697,367	+		PFLU_RS16280	0.46	-2.0
3,697,367	+		PFLU_RS16280	0.46	+3.4
3,697,367	+		PFLU_RS16280	0.46	-2.3
3,697,367	+		PFLU_RS16280	0.46	+2.8
3,697,368	-		PFLU_RS16280	0.46	+1.0
3,697,393	+		PFLU_RS16280	0.50	-1.4
3,697,393	+		PFLU_RS16280	0.50	-2.4
3,697,393	+		PFLU_RS16280	0.50	-0.0
3,697,393	+		PFLU_RS16280	0.50	-0.8
3,697,393	+		PFLU_RS16280	0.50	+1.1
3,697,394	-		PFLU_RS16280	0.50	-1.8
3,697,399	-		PFLU_RS16280	0.51	-1.0
3,697,399	-		PFLU_RS16280	0.51	-1.9
3,697,416	+		PFLU_RS16280	0.54	-1.2
3,697,440	-		PFLU_RS16280	0.57	-0.5
3,697,440	-		PFLU_RS16280	0.57	+1.2
3,697,442	+		PFLU_RS16280	0.58	-1.9
3,697,442	+		PFLU_RS16280	0.58	-0.8
3,697,442	+		PFLU_RS16280	0.58	-1.3
3,697,442	+		PFLU_RS16280	0.58	-0.5
3,697,443	-		PFLU_RS16280	0.58	+1.1
3,697,443	-		PFLU_RS16280	0.58	-0.1
3,697,443	-		PFLU_RS16280	0.58	+1.8
3,697,443	-		PFLU_RS16280	0.58	+0.7
3,697,443	-		PFLU_RS16280	0.58	-1.0
3,697,474	+		PFLU_RS16280	0.62	-1.8
3,697,474	+		PFLU_RS16280	0.62	-0.5
3,697,474	+		PFLU_RS16280	0.62	-1.0
3,697,474	+		PFLU_RS16280	0.62	+2.2
3,697,475	-		PFLU_RS16280	0.62	+1.2
3,697,475	-		PFLU_RS16280	0.62	+0.2
3,697,475	-		PFLU_RS16280	0.62	-0.2