Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07105

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
1,580,526	-		PFLU_RS07095	0.81	+1.2
1,580,534	+		PFLU_RS07095	0.82	-0.6
1,580,670	+				+2.6
1,580,719	+				-1.2
1,580,720	-				+1.0
1,580,720	-				-2.3
1,580,791	+				+0.2
1,580,791	+				+2.2
1,580,791	+				+0.8
1,580,791	+				-2.2
1,580,791	+				+1.1
1,580,791	+				-0.0
1,580,792	-				+1.5
1,580,792	-				+0.3
1,580,792	-				-0.1
1,580,792	-				+1.5
1,580,792	-				-1.2
1,580,792	-				+0.5
1,580,843	+				-0.7
1,580,844	-				+1.1
1,580,844	-				+0.6
1,580,863	+				+0.5
1,580,863	+				-0.6
1,580,863	+				+0.1
1,580,893	-				-1.6
1,580,935	+				-1.0
1,580,935	+				+1.5
1,580,935	+				-0.8
1,580,965	-				-0.8
1,581,011	+				+1.4
1,581,012	-				+1.5
1,581,012	-				-1.7
1,581,012	-				+0.3
1,581,092	+				-2.2
1,581,092	+				+3.4
1,581,092	+				-1.3
1,581,092	+				-0.6
1,581,092	+				+2.5
1,581,093	-				-1.2
1,581,093	-				-2.5
1,581,093	-				+0.9
1,581,149	+		PFLU_RS07100	0.17	+1.2
1,581,149	+		PFLU_RS07100	0.17	+0.5
1,581,149	+		PFLU_RS07100	0.17	-0.2
1,581,150	-		PFLU_RS07100	0.17	+0.3
1,581,150	-		PFLU_RS07100	0.17	-0.7
1,581,150	-		PFLU_RS07100	0.17	-2.6
1,581,152	+		PFLU_RS07100	0.17	-1.4
1,581,152	+		PFLU_RS07100	0.17	+0.9
1,581,152	+		PFLU_RS07100	0.17	+2.3
1,581,152	+		PFLU_RS07100	0.17	-0.3
1,581,153	-		PFLU_RS07100	0.18	+0.8
1,581,170	+		PFLU_RS07100	0.23	+2.0
1,581,170	+		PFLU_RS07100	0.23	+1.2
1,581,170	+		PFLU_RS07100	0.23	-0.4
1,581,170	+		PFLU_RS07100	0.23	-0.8
1,581,170	+		PFLU_RS07100	0.23	-0.1
1,581,170	+		PFLU_RS07100	0.23	+1.5
1,581,170	+		PFLU_RS07100	0.23	-1.9
1,581,170	+		PFLU_RS07100	0.23	+1.4
1,581,170	+		PFLU_RS07100	0.23	-3.6
1,581,170	+		PFLU_RS07100	0.23	+1.2
1,581,171	-		PFLU_RS07100	0.23	-1.6
1,581,171	-		PFLU_RS07100	0.23	-1.2
1,581,171	-		PFLU_RS07100	0.23	-0.8
1,581,171	-		PFLU_RS07100	0.23	-0.9
1,581,171	-		PFLU_RS07100	0.23	+0.0
1,581,171	-		PFLU_RS07100	0.23	-2.7
1,581,171	-		PFLU_RS07100	0.23	+0.2
1,581,171	-		PFLU_RS07100	0.23	+4.5
1,581,171	-		PFLU_RS07100	0.23	+0.5
1,581,171	-		PFLU_RS07100	0.23	-1.4
1,581,171	-		PFLU_RS07100	0.23	+0.2
1,581,171	-		PFLU_RS07100	0.23	+1.2
1,581,171	-		PFLU_RS07100	0.23	-1.9
1,581,171	-		PFLU_RS07100	0.23	-0.4
1,581,188	+		PFLU_RS07100	0.28	+1.9
1,581,188	+		PFLU_RS07100	0.28	+0.7
1,581,189	-		PFLU_RS07100	0.28	+1.2
1,581,189	-		PFLU_RS07100	0.28	+2.0
1,581,189	-		PFLU_RS07100	0.28	+0.3
1,581,189	-		PFLU_RS07100	0.28	-0.6
1,581,189	-		PFLU_RS07100	0.28	-2.1
1,581,189	-		PFLU_RS07100	0.28	-0.5
1,581,209	+		PFLU_RS07100	0.33	+1.4
1,581,209	+		PFLU_RS07100	0.33	-0.1
1,581,209	+		PFLU_RS07100	0.33	+1.4
1,581,209	+		PFLU_RS07100	0.33	-0.4
1,581,209	+		PFLU_RS07100	0.33	-1.9
1,581,209	+		PFLU_RS07100	0.33	+0.1
1,581,209	+		PFLU_RS07100	0.33	+2.1
1,581,209	+		PFLU_RS07100	0.33	+3.6
1,581,209	+		PFLU_RS07100	0.33	+2.1
1,581,209	+		PFLU_RS07100	0.33	+1.0
1,581,210	-		PFLU_RS07100	0.34	-1.4
1,581,210	-		PFLU_RS07100	0.34	-0.4
1,581,210	-		PFLU_RS07100	0.34	+0.1
1,581,210	-		PFLU_RS07100	0.34	-0.8
1,581,210	-		PFLU_RS07100	0.34	-2.7
1,581,210	-		PFLU_RS07100	0.34	-1.3
1,581,210	-		PFLU_RS07100	0.34	+4.0
1,581,210	-		PFLU_RS07100	0.34	+0.9
1,581,210	-		PFLU_RS07100	0.34	+0.8
1,581,210	-		PFLU_RS07100	0.34	-1.1
1,581,210	-		PFLU_RS07100	0.34	+2.9
1,581,210	-		PFLU_RS07100	0.34	+1.8
1,581,211	+		PFLU_RS07100	0.34	-0.5
1,581,212	+		PFLU_RS07100	0.34	+0.6
1,581,212	+		PFLU_RS07100	0.34	+0.6
1,581,212	+		PFLU_RS07100	0.34	-0.3
1,581,212	+		PFLU_RS07100	0.34	-1.4
1,581,212	+		PFLU_RS07100	0.34	-1.3
1,581,212	+		PFLU_RS07100	0.34	-1.7
1,581,212	+		PFLU_RS07100	0.34	-1.8
1,581,213	-		PFLU_RS07100	0.34	-2.6
1,581,213	-		PFLU_RS07100	0.34	-1.0
1,581,213	-		PFLU_RS07100	0.34	+0.5
1,581,213	-		PFLU_RS07100	0.34	+0.6
1,581,213	-		PFLU_RS07100	0.34	+1.4
1,581,215	+		PFLU_RS07100	0.35	+0.4
1,581,216	-		PFLU_RS07100	0.35	-0.7
1,581,251	+		PFLU_RS07100	0.45	+0.6
1,581,251	+		PFLU_RS07100	0.45	-2.1
1,581,251	+		PFLU_RS07100	0.45	+0.5
1,581,251	+		PFLU_RS07100	0.45	-0.4
1,581,251	+		PFLU_RS07100	0.45	-0.6
1,581,252	-		PFLU_RS07100	0.45	-1.8
1,581,252	-		PFLU_RS07100	0.45	-1.1
1,581,252	-		PFLU_RS07100	0.45	-1.4
1,581,252	-		PFLU_RS07100	0.45	+2.0
1,581,269	+		PFLU_RS07100	0.50	-0.6
1,581,269	+		PFLU_RS07100	0.50	-0.1
1,581,270	-		PFLU_RS07100	0.50	-1.8
1,581,270	-		PFLU_RS07100	0.50	-0.4
1,581,272	+		PFLU_RS07100	0.51	-1.1
1,581,273	-		PFLU_RS07100	0.51	-1.9
1,581,290	+		PFLU_RS07100	0.56	-0.2
1,581,290	+		PFLU_RS07100	0.56	-2.2
1,581,290	+		PFLU_RS07100	0.56	-1.2
1,581,293	+		PFLU_RS07100	0.57	-1.5
1,581,293	+		PFLU_RS07100	0.57	+0.6
1,581,308	+		PFLU_RS07100	0.61	-0.9
1,581,311	+		PFLU_RS07100	0.62	-0.6
1,581,312	-		PFLU_RS07100	0.62	+1.9
1,581,312	-		PFLU_RS07100	0.62	+1.5
1,581,329	+		PFLU_RS07100	0.67	+0.4
1,581,330	-		PFLU_RS07100	0.67	-2.4
1,581,333	-		PFLU_RS07100	0.68	-2.1
1,581,457	+				-1.8
1,581,457	+				+1.0
1,581,458	-				+0.6
1,581,458	-				-0.5
1,581,458	-				-1.8
1,581,458	-				-2.3
1,581,488	+				+3.2
1,581,489	-				+0.3
1,581,489	-				-0.3
1,581,489	-				-1.6
1,581,501	+				+0.8
1,581,502	-				+0.4
1,581,502	-				-1.5
1,581,502	-				-1.0
1,581,502	-				+2.7
1,581,502	-				+1.3
1,581,502	-				-0.4
1,581,551	+				+0.3
1,581,552	-				+0.6
1,581,552	-				+0.6
1,581,552	-				+0.2
1,581,552	-				-0.7
1,581,694	+		PFLU_RS07105	0.17	+1.0
1,581,694	+		PFLU_RS07105	0.17	-2.7
1,581,694	+		PFLU_RS07105	0.17	+0.5
1,581,694	+		PFLU_RS07105	0.17	-0.1
1,581,694	+		PFLU_RS07105	0.17	-0.8
1,581,694	+		PFLU_RS07105	0.17	-1.2
1,581,694	+		PFLU_RS07105	0.17	-1.4
1,581,694	+		PFLU_RS07105	0.17	+2.0
1,581,694	+		PFLU_RS07105	0.17	-1.1
1,581,694	+		PFLU_RS07105	0.17	-2.5
1,581,695	-		PFLU_RS07105	0.17	-1.0
1,581,695	-		PFLU_RS07105	0.17	+0.9
1,581,695	-		PFLU_RS07105	0.17	-0.7
1,581,695	-		PFLU_RS07105	0.17	+1.7
1,581,695	-		PFLU_RS07105	0.17	-0.8
1,581,695	-		PFLU_RS07105	0.17	+2.1
1,581,695	-		PFLU_RS07105	0.17	+5.2
1,581,695	-		PFLU_RS07105	0.17	-1.9
1,581,695	-		PFLU_RS07105	0.17	-1.0
1,581,695	-		PFLU_RS07105	0.17	+3.5
1,582,092	-		PFLU_RS07105	0.53	+0.3
1,582,171	+		PFLU_RS07105	0.60	-1.8
1,582,223	+		PFLU_RS07105	0.65	+0.2
1,582,224	-		PFLU_RS07105	0.65	+0.6
1,582,270	+		PFLU_RS07105	0.69	-1.0
1,582,270	+		PFLU_RS07105	0.69	+0.8
1,582,270	+		PFLU_RS07105	0.69	-3.0
1,582,270	+		PFLU_RS07105	0.69	-0.1
1,582,270	+		PFLU_RS07105	0.69	+1.0
1,582,303	+		PFLU_RS07105	0.72	-1.4
1,582,304	-		PFLU_RS07105	0.72	-2.1
1,582,330	+		PFLU_RS07105	0.74	-0.3
1,582,455	+		PFLU_RS07105	0.85	+0.7
1,582,455	+		PFLU_RS07105	0.85	-0.1
1,582,455	+		PFLU_RS07105	0.85	+0.8
1,582,455	+		PFLU_RS07105	0.85	+1.7
1,582,455	+		PFLU_RS07105	0.85	-0.6
1,582,455	+		PFLU_RS07105	0.85	-0.0
1,582,456	-		PFLU_RS07105	0.86	-1.8
1,582,456	-		PFLU_RS07105	0.86	+2.9
1,582,487	+		PFLU_RS07105	0.88	+1.2
1,582,488	-		PFLU_RS07105	0.88	+5.2
1,582,632	+				-0.0
1,582,632	+				+0.9
1,582,633	-				-2.5
1,582,633	-				+0.2
1,582,648	+				-0.6
1,582,648	+				+0.5
1,582,648	+				+0.2
1,582,648	+				-0.6
1,582,648	+				-2.0
1,582,648	+				-0.1
1,582,648	+				-0.4
1,582,649	-				-0.6
1,582,649	-				+0.5
1,582,649	-				-0.7
1,582,649	-				-1.0
1,582,649	-				+1.6
1,582,649	-				-0.4
1,582,649	-				+0.9
1,582,649	-				-0.4
1,582,649	-				-0.0
1,582,649	-				-1.1
1,582,661	+				-1.9
1,582,661	+				+1.2
1,582,661	+				-1.5
1,582,662	-				+0.2
1,582,714	+				+0.4
1,582,714	+				-2.0
1,582,744	+				+1.0
1,582,744	+				+0.1
1,582,744	+				-1.6
1,582,744	+				+2.5
1,582,745	-				-1.2
1,582,745	-				-2.0
1,582,745	-				-2.6
1,582,745	-				+1.4
1,582,745	-				+2.1
1,582,745	-				+0.5
1,582,745	-				-0.4
1,582,745	-				+1.2
1,582,770	+				-0.6
1,582,771	-				-2.8
1,582,825	+		PFLU_RS07110	0.10	-0.4
1,582,825	+		PFLU_RS07110	0.10	-1.4
1,582,825	+		PFLU_RS07110	0.10	-0.0
1,582,825	+		PFLU_RS07110	0.10	+0.9
1,582,825	+		PFLU_RS07110	0.10	+0.5
1,582,825	+		PFLU_RS07110	0.10	+0.9
1,582,825	+		PFLU_RS07110	0.10	+1.8
1,582,825	+		PFLU_RS07110	0.10	-1.6
1,582,825	+		PFLU_RS07110	0.10	-3.0
1,582,825	+		PFLU_RS07110	0.10	+0.9
1,582,825	+		PFLU_RS07110	0.10	-1.2
1,582,825	+		PFLU_RS07110	0.10	-0.1
1,582,825	+		PFLU_RS07110	0.10	+0.8
1,582,825	+		PFLU_RS07110	0.10	+0.9
1,582,825	+		PFLU_RS07110	0.10	+0.4
1,582,825	+		PFLU_RS07110	0.10	+1.8
1,582,825	+		PFLU_RS07110	0.10	+0.6
1,582,825	+		PFLU_RS07110	0.10	+0.2
1,582,825	+		PFLU_RS07110	0.10	-1.0
1,582,825	+		PFLU_RS07110	0.10	-2.6
1,582,825	+		PFLU_RS07110	0.10	-1.6
1,582,825	+		PFLU_RS07110	0.10	-0.3
1,582,825	+		PFLU_RS07110	0.10	+2.7
1,582,826	-		PFLU_RS07110	0.11	+0.6
1,582,826	-		PFLU_RS07110	0.11	+0.9
1,582,826	-		PFLU_RS07110	0.11	-0.4
1,582,826	-		PFLU_RS07110	0.11	-1.4
1,582,826	-		PFLU_RS07110	0.11	-2.0
1,582,826	-		PFLU_RS07110	0.11	-0.4
1,582,826	-		PFLU_RS07110	0.11	+1.8
1,582,826	-		PFLU_RS07110	0.11	-1.2
1,582,826	-		PFLU_RS07110	0.11	-0.2
1,582,826	-		PFLU_RS07110	0.11	-1.5
1,582,826	-		PFLU_RS07110	0.11	+1.2
1,582,826	-		PFLU_RS07110	0.11	-0.5
1,582,826	-		PFLU_RS07110	0.11	+2.2
1,582,826	-		PFLU_RS07110	0.11	-0.6
1,582,826	-		PFLU_RS07110	0.11	-0.4
1,582,826	-		PFLU_RS07110	0.11	+0.4
1,582,826	-		PFLU_RS07110	0.11	-1.7
1,582,882	+		PFLU_RS07110	0.19	-1.6
1,582,883	-		PFLU_RS07110	0.19	+1.2
1,582,883	-		PFLU_RS07110	0.19	-3.1
1,582,967	-		PFLU_RS07110	0.31	+0.4
1,583,043	+		PFLU_RS07110	0.42	+0.0
1,583,043	+		PFLU_RS07110	0.42	-1.6
1,583,043	+		PFLU_RS07110	0.42	-1.2
1,583,043	+		PFLU_RS07110	0.42	+1.5
1,583,043	+		PFLU_RS07110	0.42	-2.3
1,583,043	+		PFLU_RS07110	0.42	-2.1
1,583,043	+		PFLU_RS07110	0.42	-0.2
1,583,044	-		PFLU_RS07110	0.42	+0.4
1,583,044	-		PFLU_RS07110	0.42	+0.1
1,583,044	-		PFLU_RS07110	0.42	-0.7
1,583,044	-		PFLU_RS07110	0.42	-1.0
1,583,044	-		PFLU_RS07110	0.42	+0.2
1,583,044	-		PFLU_RS07110	0.42	-0.6
1,583,044	-		PFLU_RS07110	0.42	+0.5
1,583,044	-		PFLU_RS07110	0.42	-1.2
1,583,044	-		PFLU_RS07110	0.42	-0.4
1,583,044	-		PFLU_RS07110	0.42	+0.3
1,583,044	-		PFLU_RS07110	0.42	+0.1
1,583,044	-		PFLU_RS07110	0.42	-0.1
1,583,047	+		PFLU_RS07110	0.42	-0.9
1,583,047	+		PFLU_RS07110	0.42	+0.2
1,583,047	+		PFLU_RS07110	0.42	-1.5
1,583,047	+		PFLU_RS07110	0.42	-0.2
1,583,047	+		PFLU_RS07110	0.42	+0.1
1,583,047	+		PFLU_RS07110	0.42	-1.1
1,583,047	+		PFLU_RS07110	0.42	-0.1
1,583,047	+		PFLU_RS07110	0.42	-0.1
1,583,047	+		PFLU_RS07110	0.42	-0.4
1,583,047	+		PFLU_RS07110	0.42	+0.9
1,583,047	+		PFLU_RS07110	0.42	-1.0
1,583,047	+		PFLU_RS07110	0.42	+2.0
1,583,048	-		PFLU_RS07110	0.43	-0.1
1,583,048	-		PFLU_RS07110	0.43	-0.4
1,583,048	-		PFLU_RS07110	0.43	+0.2
1,583,048	-		PFLU_RS07110	0.43	+2.5
1,583,048	-		PFLU_RS07110	0.43	+1.2
1,583,048	-		PFLU_RS07110	0.43	+0.2
1,583,048	-		PFLU_RS07110	0.43	+0.2
1,583,048	-		PFLU_RS07110	0.43	+0.2
1,583,048	-		PFLU_RS07110	0.43	-1.0
1,583,048	-		PFLU_RS07110	0.43	+1.2
1,583,048	-		PFLU_RS07110	0.43	-1.6
1,583,048	-		PFLU_RS07110	0.43	+1.2
1,583,048	-		PFLU_RS07110	0.43	+0.6
1,583,048	-		PFLU_RS07110	0.43	+0.6
1,583,049	+		PFLU_RS07110	0.43	-0.7
1,583,049	+		PFLU_RS07110	0.43	-0.5
1,583,049	+		PFLU_RS07110	0.43	+1.1
1,583,050	-		PFLU_RS07110	0.43	-0.4
1,583,050	-		PFLU_RS07110	0.43	+0.3
1,583,050	-		PFLU_RS07110	0.43	-3.1
1,583,050	-		PFLU_RS07110	0.43	-0.9
1,583,050	-		PFLU_RS07110	0.43	-1.0
1,583,050	-		PFLU_RS07110	0.43	-0.1
1,583,095	+		PFLU_RS07110	0.49	-1.9
1,583,495	+				-1.0
1,583,496	-				-0.4
1,583,535	+				-1.1
1,583,535	+				-0.8
1,583,535	+				-2.6
1,583,536	-				+0.1
1,583,536	-				+2.9
1,583,536	-				-0.8
1,583,536	-				+0.6
1,583,536	-				-1.5
1,583,536	-				+2.8
1,583,536	-				-2.4
1,583,536	-				-0.6
1,583,536	-				+0.5
1,583,539	+				-1.8
1,583,540	-				+0.6