Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003684

Experiment: Sucrose 5 mM in soil extract

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose 5 mM in soil extract
4,139,567	-				+2.9
4,139,567	-				-0.5
4,139,567	-				-1.5
4,139,567	-				+2.9
4,139,567	-				-1.7
4,139,567	-				-0.6
4,139,567	-				+2.5
4,139,569	-				-1.0
4,139,581	-				-0.4
4,139,581	-				-0.2
4,139,588	-				-0.8
4,139,588	-				+0.4
4,139,588	-				+2.9
4,139,588	-				-0.6
4,139,588	-				+1.9
4,139,588	-				+0.2
4,139,588	-				-0.9
4,139,588	-				-0.8
4,139,588	-				+1.9
4,139,588	-				-0.5
4,139,588	-				-0.7
4,139,708	-		ABIE53_003683	0.17	-2.4
4,139,708	-		ABIE53_003683	0.17	+0.8
4,139,708	-		ABIE53_003683	0.17	+1.9
4,139,708	-		ABIE53_003683	0.17	+2.5
4,139,708	-		ABIE53_003683	0.17	+0.2
4,139,708	-		ABIE53_003683	0.17	+0.4
4,139,708	-		ABIE53_003683	0.17	+1.1
4,139,708	-		ABIE53_003683	0.17	-0.0
4,139,708	-		ABIE53_003683	0.17	+0.9
4,139,708	-		ABIE53_003683	0.17	+0.2
4,139,708	-		ABIE53_003683	0.17	+1.9
4,139,708	-		ABIE53_003683	0.17	+1.6
4,139,708	-		ABIE53_003683	0.17	+0.4
4,139,708	-		ABIE53_003683	0.17	+0.0
4,139,708	-		ABIE53_003683	0.17	+0.2
4,139,708	-		ABIE53_003683	0.17	-1.0
4,139,708	-		ABIE53_003683	0.17	+0.4
4,139,708	-		ABIE53_003683	0.17	+1.2
4,139,708	-		ABIE53_003683	0.17	-0.4
4,139,708	-		ABIE53_003683	0.17	+1.7
4,139,710	-		ABIE53_003683	0.17	+1.5
4,139,710	-		ABIE53_003683	0.17	-0.5
4,139,710	-		ABIE53_003683	0.17	+1.2
4,139,710	-		ABIE53_003683	0.17	+1.4
4,139,710	-		ABIE53_003683	0.17	+2.1
4,139,710	-		ABIE53_003683	0.17	+0.8
4,139,710	-		ABIE53_003683	0.17	-0.1
4,139,710	-		ABIE53_003683	0.17	+1.4
4,139,710	-		ABIE53_003683	0.17	+1.0
4,139,710	-		ABIE53_003683	0.17	-0.1
4,139,710	-		ABIE53_003683	0.17	+0.3
4,139,710	-		ABIE53_003683	0.17	+0.9
4,139,710	-		ABIE53_003683	0.17	-0.0
4,139,710	-		ABIE53_003683	0.17	+1.4
4,139,710	-		ABIE53_003683	0.17	+1.8
4,139,710	-		ABIE53_003683	0.17	+3.9
4,139,710	-		ABIE53_003683	0.17	-1.5
4,139,710	-		ABIE53_003683	0.17	+0.1
4,139,710	-		ABIE53_003683	0.17	-1.0
4,139,710	-		ABIE53_003683	0.17	-0.1
4,139,710	-		ABIE53_003683	0.17	+0.2
4,139,710	-		ABIE53_003683	0.17	+0.6
4,139,710	-		ABIE53_003683	0.17	+1.9
4,139,710	-		ABIE53_003683	0.17	+2.9
4,139,710	-		ABIE53_003683	0.17	+0.7
4,139,710	-		ABIE53_003683	0.17	-0.2
4,139,710	-		ABIE53_003683	0.17	+0.4
4,139,710	-		ABIE53_003683	0.17	+0.1
4,139,710	-		ABIE53_003683	0.17	+0.6
4,139,710	-		ABIE53_003683	0.17	+2.4
4,139,710	-		ABIE53_003683	0.17	+1.9
4,139,710	-		ABIE53_003683	0.17	-1.2
4,139,710	-		ABIE53_003683	0.17	+1.1
4,139,740	-		ABIE53_003683	0.21	-0.5
4,139,740	-		ABIE53_003683	0.21	-0.2
4,139,740	-		ABIE53_003683	0.21	+0.6
4,139,740	-		ABIE53_003683	0.21	-0.5
4,139,740	-		ABIE53_003683	0.21	+1.5
4,139,745	-		ABIE53_003683	0.22	+0.4
4,139,745	-		ABIE53_003683	0.22	+0.7
4,139,745	-		ABIE53_003683	0.22	+0.9
4,139,745	-		ABIE53_003683	0.22	-0.4
4,139,745	-		ABIE53_003683	0.22	+0.6
4,139,745	-		ABIE53_003683	0.22	+0.7
4,139,842	+		ABIE53_003683	0.35	+1.4
4,139,842	+		ABIE53_003683	0.35	+0.9
4,139,842	+		ABIE53_003683	0.35	+1.8
4,139,842	+		ABIE53_003683	0.35	+2.9
4,139,842	+		ABIE53_003683	0.35	+0.4
4,139,843	-		ABIE53_003683	0.35	-0.6
4,139,843	-		ABIE53_003683	0.35	-0.6
4,139,843	-		ABIE53_003683	0.35	+1.4
4,139,843	-		ABIE53_003683	0.35	-1.2
4,139,892	+		ABIE53_003683	0.41	-0.0
4,139,893	-		ABIE53_003683	0.42	+1.4
4,139,893	-		ABIE53_003683	0.42	+1.1
4,139,893	-		ABIE53_003683	0.42	-1.4
4,139,893	-		ABIE53_003683	0.42	+1.9
4,139,893	-		ABIE53_003683	0.42	+0.3
4,139,893	-		ABIE53_003683	0.42	-0.9
4,139,893	-		ABIE53_003683	0.42	+1.0
4,139,903	-		ABIE53_003683	0.43	+1.0
4,139,903	-		ABIE53_003683	0.43	-0.3
4,139,903	-		ABIE53_003683	0.43	+3.5
4,139,923	+		ABIE53_003683	0.46	+0.9
4,139,924	-		ABIE53_003683	0.46	+1.1
4,139,924	-		ABIE53_003683	0.46	+1.4
4,139,924	-		ABIE53_003683	0.46	-0.2
4,139,949	+		ABIE53_003683	0.49	+0.7
4,139,949	+		ABIE53_003683	0.49	+0.5
4,139,949	+		ABIE53_003683	0.49	+0.1
4,139,950	-		ABIE53_003683	0.49	+0.6
4,139,950	-		ABIE53_003683	0.49	-1.7
4,139,950	-		ABIE53_003683	0.49	+0.4
4,139,950	-		ABIE53_003683	0.49	+0.6
4,139,950	-		ABIE53_003683	0.49	+0.2
4,139,950	-		ABIE53_003683	0.49	-1.0
4,139,950	-		ABIE53_003683	0.49	-0.7
4,139,950	-		ABIE53_003683	0.49	+0.9
4,139,950	-		ABIE53_003683	0.49	+0.7
4,139,950	-		ABIE53_003683	0.49	-0.1
4,139,952	-		ABIE53_003683	0.49	+2.3
4,139,955	+		ABIE53_003683	0.50	-2.2
4,139,955	+		ABIE53_003683	0.50	-0.3
4,139,955	+		ABIE53_003683	0.50	+1.4
4,139,956	-		ABIE53_003683	0.50	+1.2
4,139,956	-		ABIE53_003683	0.50	+0.2
4,139,956	-		ABIE53_003683	0.50	+0.5
4,139,956	-		ABIE53_003683	0.50	-0.4
4,139,956	-		ABIE53_003683	0.50	-0.2
4,139,956	-		ABIE53_003683	0.50	+1.1
4,139,956	-		ABIE53_003683	0.50	+0.0
4,139,956	-		ABIE53_003683	0.50	+0.4
4,139,956	-		ABIE53_003683	0.50	+1.2
4,139,956	-		ABIE53_003683	0.50	-0.5
4,140,138	+		ABIE53_003683	0.74	+0.9
4,140,138	+		ABIE53_003683	0.74	-0.2
4,140,139	-		ABIE53_003683	0.74	+1.4
4,140,139	-		ABIE53_003683	0.74	+0.3
4,140,139	-		ABIE53_003683	0.74	+0.9
4,140,174	+		ABIE53_003683	0.79	+0.9
4,140,174	+		ABIE53_003683	0.79	-0.5
4,140,175	-		ABIE53_003683	0.79	+0.1
4,140,175	-		ABIE53_003683	0.79	+0.1
4,140,175	-		ABIE53_003683	0.79	-0.1
4,140,175	-		ABIE53_003683	0.79	+0.8
4,140,175	-		ABIE53_003683	0.79	+2.8
4,140,175	-		ABIE53_003683	0.79	-1.6
4,140,179	+		ABIE53_003683	0.79	-0.5
4,140,179	+		ABIE53_003683	0.79	+0.2
4,140,179	+		ABIE53_003683	0.79	+0.5
4,140,179	+		ABIE53_003683	0.79	+0.6
4,140,179	+		ABIE53_003683	0.79	+3.9
4,140,180	-		ABIE53_003683	0.79	+0.1
4,140,180	-		ABIE53_003683	0.79	+2.9
4,140,180	-		ABIE53_003683	0.79	+0.8
4,140,180	-		ABIE53_003683	0.79	-0.1
4,140,180	-		ABIE53_003683	0.79	+0.8
4,140,180	-		ABIE53_003683	0.79	+3.9
4,140,180	-		ABIE53_003683	0.79	+0.2
4,140,264	+				+1.7
4,140,265	-				+1.7
4,140,265	-				-1.6
4,140,265	-				-0.9
4,140,265	-				+0.0
4,140,265	-				+0.9
4,140,359	+				+0.5
4,140,359	+				+0.4
4,140,359	+				-0.0
4,140,360	-				-0.2
4,140,360	-				+0.0
4,140,360	-				-0.2
4,140,371	+				+0.4
4,140,371	+				+0.3
4,140,372	-				-1.6
4,140,372	-				-1.4
4,140,446	+				-0.4
4,140,446	+				+2.4
4,140,446	+				+0.6
4,140,446	+				-0.2
4,140,447	-				-0.7
4,140,447	-				-0.0
4,140,447	-				+0.2
4,140,447	-				+0.1
4,140,477	+				-0.3
4,140,477	+				-0.3
4,140,477	+				-1.1
4,140,478	-				+0.8
4,140,478	-				+0.7
4,140,478	-				+2.4
4,140,545	+		ABIE53_003684	0.14	+0.4
4,140,545	+		ABIE53_003684	0.14	+0.9
4,140,546	-		ABIE53_003684	0.14	+0.2
4,140,824	+		ABIE53_003684	0.34	-0.1
4,140,824	+		ABIE53_003684	0.34	+1.0
4,140,824	+		ABIE53_003684	0.34	-0.2
4,140,824	+		ABIE53_003684	0.34	-0.3
4,140,824	+		ABIE53_003684	0.34	-0.3
4,140,824	+		ABIE53_003684	0.34	+0.5
4,140,824	+		ABIE53_003684	0.34	+2.9
4,140,824	+		ABIE53_003684	0.34	+1.2
4,140,824	+		ABIE53_003684	0.34	-0.2
4,140,825	-		ABIE53_003684	0.34	+0.6
4,140,825	-		ABIE53_003684	0.34	+1.4
4,140,825	-		ABIE53_003684	0.34	-0.2
4,140,825	-		ABIE53_003684	0.34	+0.5
4,140,839	+		ABIE53_003684	0.35	+0.5
4,140,839	+		ABIE53_003684	0.35	+1.3
4,140,839	+		ABIE53_003684	0.35	-0.3
4,140,840	-		ABIE53_003684	0.35	+0.2
4,140,911	+		ABIE53_003684	0.40	-0.4
4,140,911	+		ABIE53_003684	0.40	+1.2
4,140,911	+		ABIE53_003684	0.40	-1.7
4,140,911	+		ABIE53_003684	0.40	+0.9
4,140,911	+		ABIE53_003684	0.40	-0.1
4,140,911	+		ABIE53_003684	0.40	+3.9
4,140,911	+		ABIE53_003684	0.40	+0.5
4,140,911	+		ABIE53_003684	0.40	+0.1
4,140,911	+		ABIE53_003684	0.40	+0.5
4,140,911	+		ABIE53_003684	0.40	+1.9
4,140,911	+		ABIE53_003684	0.40	+0.0
4,140,911	+		ABIE53_003684	0.40	-1.4
4,140,912	-		ABIE53_003684	0.40	+0.4
4,140,912	-		ABIE53_003684	0.40	-1.0
4,140,912	-		ABIE53_003684	0.40	+0.5
4,140,912	-		ABIE53_003684	0.40	+0.3
4,140,912	-		ABIE53_003684	0.40	-0.1
4,140,912	-		ABIE53_003684	0.40	-0.7
4,140,912	-		ABIE53_003684	0.40	+0.7
4,140,912	-		ABIE53_003684	0.40	-0.6
4,140,912	-		ABIE53_003684	0.40	+0.3
4,140,912	-		ABIE53_003684	0.40	-0.6
4,140,912	-		ABIE53_003684	0.40	+0.3
4,140,912	-		ABIE53_003684	0.40	+1.0
4,140,912	-		ABIE53_003684	0.40	+0.4
4,140,912	-		ABIE53_003684	0.40	+2.6
4,140,912	-		ABIE53_003684	0.40	-0.2
4,140,995	+		ABIE53_003684	0.46	-0.2
4,140,995	+		ABIE53_003684	0.46	+1.8
4,140,995	+		ABIE53_003684	0.46	+1.4
4,140,995	+		ABIE53_003684	0.46	+0.8
4,140,995	+		ABIE53_003684	0.46	+0.9
4,140,995	+		ABIE53_003684	0.46	+0.9
4,140,996	-		ABIE53_003684	0.46	+0.6
4,140,996	-		ABIE53_003684	0.46	+1.4
4,140,996	-		ABIE53_003684	0.46	+0.4
4,140,996	-		ABIE53_003684	0.46	+0.9
4,140,996	-		ABIE53_003684	0.46	+2.9
4,140,996	-		ABIE53_003684	0.46	+1.2
4,140,998	+		ABIE53_003684	0.46	-0.2
4,140,998	+		ABIE53_003684	0.46	+0.3
4,140,998	+		ABIE53_003684	0.46	+0.6
4,140,998	+		ABIE53_003684	0.46	+0.2
4,140,999	-		ABIE53_003684	0.46	+0.4
4,140,999	-		ABIE53_003684	0.46	-0.6
4,140,999	-		ABIE53_003684	0.46	+0.2
4,140,999	-		ABIE53_003684	0.46	+0.5
4,140,999	-		ABIE53_003684	0.46	+0.5
4,140,999	-		ABIE53_003684	0.46	-0.3
4,141,193	+		ABIE53_003684	0.61	+0.1
4,141,193	+		ABIE53_003684	0.61	+0.6
4,141,193	+		ABIE53_003684	0.61	+1.1
4,141,193	+		ABIE53_003684	0.61	-0.2
4,141,193	+		ABIE53_003684	0.61	-0.8
4,141,193	+		ABIE53_003684	0.61	-0.4
4,141,193	+		ABIE53_003684	0.61	+0.6
4,141,194	-		ABIE53_003684	0.61	-0.2
4,141,194	-		ABIE53_003684	0.61	+0.3
4,141,194	-		ABIE53_003684	0.61	+1.2
4,141,194	-		ABIE53_003684	0.61	+0.2
4,141,194	-		ABIE53_003684	0.61	+2.5
4,141,194	-		ABIE53_003684	0.61	+0.9
4,141,194	-		ABIE53_003684	0.61	-0.6
4,141,194	-		ABIE53_003684	0.61	-0.5
4,141,194	-		ABIE53_003684	0.61	+1.1
4,141,194	-		ABIE53_003684	0.61	-1.2
4,141,194	-		ABIE53_003684	0.61	-0.8
4,141,305	-		ABIE53_003684	0.69	+0.1
4,141,383	-		ABIE53_003684	0.74	-0.5
4,141,383	-		ABIE53_003684	0.74	+0.2
4,141,383	-		ABIE53_003684	0.74	-0.4
4,141,391	+		ABIE53_003684	0.75	-0.5
4,141,391	+		ABIE53_003684	0.75	-1.5
4,141,391	+		ABIE53_003684	0.75	+3.4
4,141,391	+		ABIE53_003684	0.75	+0.2
4,141,391	+		ABIE53_003684	0.75	-2.2
4,141,391	+		ABIE53_003684	0.75	+0.9
4,141,391	+		ABIE53_003684	0.75	+0.5
4,141,391	+		ABIE53_003684	0.75	-0.4
4,141,391	+		ABIE53_003684	0.75	+0.2
4,141,391	+		ABIE53_003684	0.75	-1.0
4,141,391	+		ABIE53_003684	0.75	-0.2
4,141,391	+		ABIE53_003684	0.75	-1.2
4,141,391	+		ABIE53_003684	0.75	-0.1
4,141,391	+		ABIE53_003684	0.75	+0.4
4,141,391	+		ABIE53_003684	0.75	+0.6
4,141,391	+		ABIE53_003684	0.75	+0.8
4,141,392	-		ABIE53_003684	0.75	-0.1
4,141,392	-		ABIE53_003684	0.75	-1.9
4,141,392	-		ABIE53_003684	0.75	-0.3
4,141,392	-		ABIE53_003684	0.75	-0.1
4,141,392	-		ABIE53_003684	0.75	+1.9
4,141,392	-		ABIE53_003684	0.75	+1.1
4,141,392	-		ABIE53_003684	0.75	+0.8
4,141,392	-		ABIE53_003684	0.75	+0.8
4,141,392	-		ABIE53_003684	0.75	+0.3
4,141,392	-		ABIE53_003684	0.75	+0.1
4,141,392	-		ABIE53_003684	0.75	+0.1
4,141,392	-		ABIE53_003684	0.75	-0.0
4,141,392	-		ABIE53_003684	0.75	-1.1
4,141,410	+		ABIE53_003684	0.76	+0.6
4,141,410	+		ABIE53_003684	0.76	+0.2
4,141,410	+		ABIE53_003684	0.76	+0.2
4,141,410	+		ABIE53_003684	0.76	-0.2
4,141,410	+		ABIE53_003684	0.76	+1.0
4,141,410	+		ABIE53_003684	0.76	-1.0
4,141,410	+		ABIE53_003684	0.76	+0.1
4,141,410	+		ABIE53_003684	0.76	-0.9
4,141,410	+		ABIE53_003684	0.76	+1.9
4,141,410	+		ABIE53_003684	0.76	+0.7
4,141,410	+		ABIE53_003684	0.76	+0.9
4,141,410	+		ABIE53_003684	0.76	-0.5
4,141,410	+		ABIE53_003684	0.76	+0.6
4,141,410	+		ABIE53_003684	0.76	-0.1
4,141,410	+		ABIE53_003684	0.76	+0.5
4,141,410	+		ABIE53_003684	0.76	-0.5
4,141,410	+		ABIE53_003684	0.76	+1.3
4,141,410	+		ABIE53_003684	0.76	+0.8
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