Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06950

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
1,555,248	+				-0.3
1,555,248	+				+1.5
1,555,248	+				+0.3
1,555,249	-				-2.9
1,555,249	-				-2.6
1,555,252	+				+0.8
1,555,252	+				-0.1
1,555,252	+				-1.9
1,555,252	+				-1.1
1,555,252	+				-1.1
1,555,252	+				+1.6
1,555,252	+				+2.3
1,555,253	-				+0.3
1,555,253	-				-1.0
1,555,253	-				-2.8
1,555,253	-				+0.1
1,555,253	-				-1.8
1,555,253	-				-2.5
1,555,253	-				-0.7
1,555,253	-				+0.0
1,555,253	-				-0.6
1,555,253	-				-1.9
1,555,253	-				+0.2
1,555,254	+				+0.4
1,555,254	+				-0.2
1,555,254	+				+0.6
1,555,254	+				-0.2
1,555,255	-				-1.9
1,555,255	-				-1.7
1,555,255	-				+0.6
1,555,255	-				+1.1
1,555,255	-				+2.7
1,555,270	+				-1.6
1,555,485	+		PFLU_RS06945	0.18	+0.8
1,555,485	+		PFLU_RS06945	0.18	-2.5
1,555,485	+		PFLU_RS06945	0.18	-0.5
1,555,485	+		PFLU_RS06945	0.18	-0.8
1,555,485	+		PFLU_RS06945	0.18	-0.8
1,555,486	-		PFLU_RS06945	0.18	+1.3
1,555,486	-		PFLU_RS06945	0.18	-1.6
1,555,533	+		PFLU_RS06945	0.24	+0.0
1,555,533	+		PFLU_RS06945	0.24	+1.0
1,555,533	+		PFLU_RS06945	0.24	+0.9
1,555,533	+		PFLU_RS06945	0.24	-1.7
1,555,533	+		PFLU_RS06945	0.24	-0.7
1,555,533	+		PFLU_RS06945	0.24	+0.9
1,555,533	+		PFLU_RS06945	0.24	+1.0
1,555,534	-		PFLU_RS06945	0.24	+0.6
1,555,534	-		PFLU_RS06945	0.24	-1.8
1,555,534	-		PFLU_RS06945	0.24	-1.3
1,555,635	+		PFLU_RS06945	0.36	-3.2
1,555,635	+		PFLU_RS06945	0.36	-1.3
1,555,635	+		PFLU_RS06945	0.36	-1.9
1,555,635	+		PFLU_RS06945	0.36	-1.7
1,555,635	+		PFLU_RS06945	0.36	-2.4
1,555,636	-		PFLU_RS06945	0.36	-2.8
1,555,636	-		PFLU_RS06945	0.36	-2.0
1,555,636	-		PFLU_RS06945	0.36	-2.0
1,555,636	-		PFLU_RS06945	0.36	+1.4
1,555,636	-		PFLU_RS06945	0.36	-2.1
1,555,681	+		PFLU_RS06945	0.41	+0.4
1,555,785	+		PFLU_RS06945	0.53	+0.2
1,555,785	+		PFLU_RS06945	0.53	-1.2
1,555,785	+		PFLU_RS06945	0.53	+0.4
1,555,785	+		PFLU_RS06945	0.53	+0.8
1,555,785	+		PFLU_RS06945	0.53	+0.5
1,555,785	+		PFLU_RS06945	0.53	-1.8
1,555,785	+		PFLU_RS06945	0.53	+0.6
1,555,786	-		PFLU_RS06945	0.53	-0.7
1,555,786	-		PFLU_RS06945	0.53	-2.4
1,555,786	-		PFLU_RS06945	0.53	+0.2
1,555,786	-		PFLU_RS06945	0.53	+2.4
1,555,786	-		PFLU_RS06945	0.53	+0.8
1,555,786	-		PFLU_RS06945	0.53	-0.6
1,555,786	-		PFLU_RS06945	0.53	+0.6
1,555,786	-		PFLU_RS06945	0.53	-2.1
1,555,786	-		PFLU_RS06945	0.53	-2.2
1,555,786	-		PFLU_RS06945	0.53	-1.7
1,555,786	-		PFLU_RS06945	0.53	-1.7
1,555,786	-		PFLU_RS06945	0.53	-0.7
1,555,786	-		PFLU_RS06945	0.53	+2.2
1,555,827	+		PFLU_RS06945	0.58	-0.6
1,555,828	-		PFLU_RS06945	0.58	+2.4
1,555,863	+		PFLU_RS06945	0.62	+0.2
1,555,864	-		PFLU_RS06945	0.62	+0.1
1,555,864	-		PFLU_RS06945	0.62	-0.1
1,555,998	+		PFLU_RS06945	0.77	+2.9
1,555,998	+		PFLU_RS06945	0.77	-1.6
1,556,034	+		PFLU_RS06945	0.81	-0.4
1,556,034	+		PFLU_RS06945	0.81	+1.3
1,556,034	+		PFLU_RS06945	0.81	+0.0
1,556,034	+		PFLU_RS06945	0.81	-2.0
1,556,035	-		PFLU_RS06945	0.81	-2.0
1,556,035	-		PFLU_RS06945	0.81	-0.5
1,556,035	-		PFLU_RS06945	0.81	-0.7
1,556,035	-		PFLU_RS06945	0.81	+1.4
1,556,075	+		PFLU_RS06945	0.86	-1.0
1,556,076	-		PFLU_RS06945	0.86	-0.4
1,556,076	-		PFLU_RS06945	0.86	-0.9
1,556,076	-		PFLU_RS06945	0.86	-0.2
1,556,268	+				+1.2
1,556,269	-				+0.3
1,556,269	-				-1.9
1,556,269	-				-1.0
1,556,271	+				-0.3
1,556,271	+				+0.9
1,556,271	+				+1.0
1,556,271	+				-0.4
1,556,271	+				-0.1
1,556,271	+				-0.5
1,556,272	-				-0.4
1,556,272	-				-1.6
1,556,531	+		PFLU_RS06950	0.39	-0.7
1,556,568	+		PFLU_RS06950	0.44	+1.4
1,556,569	-		PFLU_RS06950	0.44	+1.4
1,556,569	-		PFLU_RS06950	0.44	+2.2
1,556,569	-		PFLU_RS06950	0.44	-1.4
1,556,606	+		PFLU_RS06950	0.49	-0.2
1,556,606	+		PFLU_RS06950	0.49	-1.6
1,556,682	+		PFLU_RS06950	0.58	-1.3
1,556,683	-		PFLU_RS06950	0.58	+1.8
1,556,683	-		PFLU_RS06950	0.58	-1.1
1,556,683	-		PFLU_RS06950	0.58	-2.9
1,556,811	+		PFLU_RS06950	0.75	-0.6
1,556,811	+		PFLU_RS06950	0.75	-2.4
1,556,811	+		PFLU_RS06950	0.75	-1.4
1,556,811	+		PFLU_RS06950	0.75	+0.3
1,556,811	+		PFLU_RS06950	0.75	-0.7
1,556,811	+		PFLU_RS06950	0.75	-1.7
1,556,811	+		PFLU_RS06950	0.75	-3.3
1,556,811	+		PFLU_RS06950	0.75	-2.7
1,556,811	+		PFLU_RS06950	0.75	-1.6
1,556,812	-		PFLU_RS06950	0.75	-2.3
1,556,812	-		PFLU_RS06950	0.75	-3.2
1,556,812	-		PFLU_RS06950	0.75	+0.2
1,556,812	-		PFLU_RS06950	0.75	+0.3
1,556,812	-		PFLU_RS06950	0.75	-0.4
1,556,814	+		PFLU_RS06950	0.75	+1.0
1,556,814	+		PFLU_RS06950	0.75	+1.7
1,556,814	+		PFLU_RS06950	0.75	+1.2
1,556,814	+		PFLU_RS06950	0.75	+0.5
1,556,814	+		PFLU_RS06950	0.75	+0.8
1,556,814	+		PFLU_RS06950	0.75	-3.1
1,556,814	+		PFLU_RS06950	0.75	-0.1
1,556,814	+		PFLU_RS06950	0.75	+0.4
1,556,814	+		PFLU_RS06950	0.75	+0.6
1,556,814	+		PFLU_RS06950	0.75	-2.2
1,556,814	+		PFLU_RS06950	0.75	+1.2
1,556,814	+		PFLU_RS06950	0.75	-1.0
1,556,814	+		PFLU_RS06950	0.75	-2.2
1,556,814	+		PFLU_RS06950	0.75	-1.9
1,556,814	+		PFLU_RS06950	0.75	+2.4
1,556,814	+		PFLU_RS06950	0.75	-2.4
1,556,814	+		PFLU_RS06950	0.75	-1.8
1,556,814	+		PFLU_RS06950	0.75	-0.8
1,556,814	+		PFLU_RS06950	0.75	-1.3
1,556,814	+		PFLU_RS06950	0.75	+3.0
1,556,814	+		PFLU_RS06950	0.75	+0.4
1,556,814	+		PFLU_RS06950	0.75	+0.6
1,556,814	+		PFLU_RS06950	0.75	-0.9
1,556,814	+		PFLU_RS06950	0.75	-0.2
1,556,814	+		PFLU_RS06950	0.75	-0.2
1,556,815	-		PFLU_RS06950	0.75	-0.3
1,556,815	-		PFLU_RS06950	0.75	+0.6
1,556,815	-		PFLU_RS06950	0.75	+2.2
1,556,815	-		PFLU_RS06950	0.75	-1.1
1,556,815	-		PFLU_RS06950	0.75	-0.2
1,556,815	-		PFLU_RS06950	0.75	-2.1
1,556,815	-		PFLU_RS06950	0.75	-1.2
1,556,815	-		PFLU_RS06950	0.75	-2.1
1,556,815	-		PFLU_RS06950	0.75	+0.7
1,556,815	-		PFLU_RS06950	0.75	+0.0
1,556,815	-		PFLU_RS06950	0.75	+0.8
1,556,815	-		PFLU_RS06950	0.75	-1.3
1,556,815	-		PFLU_RS06950	0.75	+1.2
1,556,815	-		PFLU_RS06950	0.75	-1.3
1,556,815	-		PFLU_RS06950	0.75	-0.7
1,556,815	-		PFLU_RS06950	0.75	+1.5
1,556,815	-		PFLU_RS06950	0.75	+1.2
1,556,815	-		PFLU_RS06950	0.75	-1.8
1,556,815	-		PFLU_RS06950	0.75	-1.8
1,556,815	-		PFLU_RS06950	0.75	+1.3
1,556,815	-		PFLU_RS06950	0.75	-2.9
1,556,815	-		PFLU_RS06950	0.75	+0.9
1,556,815	-		PFLU_RS06950	0.75	+0.4
1,556,815	-		PFLU_RS06950	0.75	-3.1
1,556,815	-		PFLU_RS06950	0.75	+0.2
1,556,926	+		PFLU_RS06950	0.90	-0.1
1,556,926	+		PFLU_RS06950	0.90	-1.3
1,556,926	+		PFLU_RS06950	0.90	-2.3
1,556,926	+		PFLU_RS06950	0.90	+0.2
1,556,926	+		PFLU_RS06950	0.90	-2.9
1,556,926	+		PFLU_RS06950	0.90	-1.8
1,556,926	+		PFLU_RS06950	0.90	-0.1
1,556,927	-		PFLU_RS06950	0.90	-2.1
1,556,927	-		PFLU_RS06950	0.90	-0.4
1,556,927	-		PFLU_RS06950	0.90	-2.1
1,556,927	-		PFLU_RS06950	0.90	+0.7
1,556,927	-		PFLU_RS06950	0.90	+1.4
1,556,927	-		PFLU_RS06950	0.90	+1.6
1,556,927	-		PFLU_RS06950	0.90	-1.3
1,556,927	-		PFLU_RS06950	0.90	-1.0
1,556,927	-		PFLU_RS06950	0.90	-0.4
1,556,927	-		PFLU_RS06950	0.90	-1.6
1,556,927	-		PFLU_RS06950	0.90	+0.2
1,556,929	+				+1.2
1,556,930	-				-1.2
1,556,993	+				+0.3
1,556,993	+				+0.9
1,556,993	+				-0.1
1,556,994	-				-0.7
1,556,994	-				-0.3
1,556,994	-				-2.3
1,556,994	-				-1.7
1,556,994	-				+1.2
1,556,994	-				+2.4
1,557,144	+				-1.8
1,557,144	+				-1.6
1,557,145	-				+0.8
1,557,145	-				-0.4
1,557,174	-				-0.4
1,557,187	+				+1.9
1,557,252	+		PFLU_RS06955	0.16	+0.9
1,557,252	+		PFLU_RS06955	0.16	+3.3
1,557,252	+		PFLU_RS06955	0.16	-1.0
1,557,253	-		PFLU_RS06955	0.16	-0.7
1,557,253	-		PFLU_RS06955	0.16	-1.2
1,557,253	-		PFLU_RS06955	0.16	-0.8
1,557,253	-		PFLU_RS06955	0.16	-0.7
1,557,253	-		PFLU_RS06955	0.16	-1.3
1,557,253	-		PFLU_RS06955	0.16	+1.0
1,557,253	-		PFLU_RS06955	0.16	+2.2
1,557,253	-		PFLU_RS06955	0.16	-1.6
1,557,253	-		PFLU_RS06955	0.16	+1.3
1,557,375	+		PFLU_RS06955	0.39	-1.9
1,557,375	+		PFLU_RS06955	0.39	+2.5
1,557,375	+		PFLU_RS06955	0.39	+1.2
1,557,375	+		PFLU_RS06955	0.39	-2.4
1,557,376	-		PFLU_RS06955	0.39	-1.2
1,557,376	-		PFLU_RS06955	0.39	-1.7
1,557,376	-		PFLU_RS06955	0.39	+1.2
1,557,376	-		PFLU_RS06955	0.39	-0.2
1,557,376	-		PFLU_RS06955	0.39	+0.9
1,557,376	-		PFLU_RS06955	0.39	+2.2
1,557,376	-		PFLU_RS06955	0.39	+0.6
1,557,376	-		PFLU_RS06955	0.39	+0.2
1,557,376	-		PFLU_RS06955	0.39	+1.2
1,557,475	-		PFLU_RS06955	0.58	-2.0
1,557,475	-		PFLU_RS06955	0.58	+1.2
1,557,475	-		PFLU_RS06955	0.58	+1.9
1,557,729	+				+1.1
1,557,730	-				+0.1
1,557,797	+				+1.3
1,557,797	+				+0.4
1,557,797	+				+0.2
1,557,797	+				-1.3
1,557,797	+				-0.2
1,557,797	+				+1.3
1,557,798	-				-1.1
1,557,798	-				+2.4
1,557,798	-				-0.4
1,557,798	-				-1.3
1,557,798	-				+0.6
1,557,798	-				-1.0
1,557,798	-				+0.0
1,557,798	-				+0.8
1,557,798	-				+1.0
1,557,935	+		PFLU_RS06960	0.12	-1.5
1,557,935	+		PFLU_RS06960	0.12	-0.8
1,557,935	+		PFLU_RS06960	0.12	+0.8
1,557,935	+		PFLU_RS06960	0.12	-1.8
1,557,935	+		PFLU_RS06960	0.12	+0.2
1,557,936	-		PFLU_RS06960	0.12	-0.2
1,557,936	-		PFLU_RS06960	0.12	-0.1
1,557,936	-		PFLU_RS06960	0.12	-0.8
1,557,936	-		PFLU_RS06960	0.12	-0.4