Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16480

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
3,737,759	+		PFLU_RS16470	0.81	-1.1
3,737,759	+		PFLU_RS16470	0.81	-0.2
3,737,759	+		PFLU_RS16470	0.81	-2.8
3,737,760	-		PFLU_RS16470	0.81	+0.4
3,737,760	-		PFLU_RS16470	0.81	+0.0
3,737,784	-		PFLU_RS16470	0.83	+0.4
3,737,784	-		PFLU_RS16470	0.83	-0.1
3,737,784	-		PFLU_RS16470	0.83	+4.6
3,737,941	-				-1.8
3,737,944	+				-2.2
3,737,944	+				+1.9
3,737,944	+				-2.4
3,737,944	+				+0.9
3,737,944	+				+0.3
3,737,944	+				+1.9
3,737,944	+				-2.4
3,737,944	+				-0.1
3,737,944	+				-0.9
3,737,944	+				-1.3
3,737,944	+				-0.3
3,737,944	+				-0.4
3,737,944	+				-1.1
3,737,945	-				-2.0
3,737,945	-				-1.8
3,737,945	-				+0.3
3,737,945	-				-1.9
3,737,945	-				-0.4
3,737,945	-				-2.9
3,737,945	-				-1.8
3,738,076	+				-1.3
3,738,154	+		PFLU_RS16475	0.16	-0.1
3,738,154	+		PFLU_RS16475	0.16	-1.4
3,738,184	-		PFLU_RS16475	0.22	+1.1
3,738,251	+		PFLU_RS16475	0.35	+1.9
3,738,251	+		PFLU_RS16475	0.35	-1.6
3,738,251	+		PFLU_RS16475	0.35	+0.9
3,738,252	-		PFLU_RS16475	0.36	+1.7
3,738,391	+		PFLU_RS16475	0.64	+0.6
3,738,391	+		PFLU_RS16475	0.64	-0.3
3,738,391	+		PFLU_RS16475	0.64	-0.2
3,738,391	+		PFLU_RS16475	0.64	-2.4
3,738,392	-		PFLU_RS16475	0.64	-0.0
3,738,392	-		PFLU_RS16475	0.64	-0.9
3,738,392	-		PFLU_RS16475	0.64	-0.9
3,738,413	+		PFLU_RS16475	0.68	+0.6
3,738,413	+		PFLU_RS16475	0.68	+1.1
3,738,414	-		PFLU_RS16475	0.68	-1.4
3,738,414	-		PFLU_RS16475	0.68	-0.1
3,738,449	+		PFLU_RS16475	0.76	+1.2
3,738,449	+		PFLU_RS16475	0.76	-1.3
3,738,449	+		PFLU_RS16475	0.76	+1.3
3,738,449	+		PFLU_RS16475	0.76	+2.2
3,738,449	+		PFLU_RS16475	0.76	+1.0
3,738,449	+		PFLU_RS16475	0.76	+0.9
3,738,449	+		PFLU_RS16475	0.76	+1.2
3,738,449	+		PFLU_RS16475	0.76	-1.6
3,738,449	+		PFLU_RS16475	0.76	+1.9
3,738,449	+		PFLU_RS16475	0.76	-3.4
3,738,450	-		PFLU_RS16475	0.76	-0.7
3,738,450	-		PFLU_RS16475	0.76	-1.6
3,738,450	-		PFLU_RS16475	0.76	+0.7
3,738,450	-		PFLU_RS16475	0.76	+0.7
3,738,450	-		PFLU_RS16475	0.76	+0.2
3,738,450	-		PFLU_RS16475	0.76	-0.3
3,738,450	-		PFLU_RS16475	0.76	-1.9
3,738,450	-		PFLU_RS16475	0.76	-0.3
3,738,486	+		PFLU_RS16475	0.83	+1.0
3,738,487	-		PFLU_RS16475	0.83	-0.9
3,738,575	+				+2.9
3,738,575	+				+0.7
3,738,575	+				-0.4
3,738,575	+				-0.2
3,738,575	+				-0.4
3,738,575	+				+1.5
3,738,576	-				-2.7
3,738,576	-				+0.1
3,738,631	+				+1.4
3,738,631	+				-0.3
3,738,631	+				+0.3
3,738,631	+				-1.9
3,738,631	+				+0.0
3,738,632	-				-1.3
3,738,632	-				-0.9
3,738,655	+				-1.3
3,738,701	+				+1.7
3,738,705	-				+2.5
3,738,873	-				-1.9
3,738,927	+				-0.1
3,738,928	-				+0.6
3,739,016	+		PFLU_RS16480	0.13	-0.4
3,739,016	+		PFLU_RS16480	0.13	+0.5
3,739,017	-		PFLU_RS16480	0.13	+0.9
3,739,017	-		PFLU_RS16480	0.13	+1.2
3,739,110	+		PFLU_RS16480	0.17	-1.2
3,739,110	+		PFLU_RS16480	0.17	-0.6
3,739,111	-		PFLU_RS16480	0.17	+0.1
3,739,111	-		PFLU_RS16480	0.17	+0.7
3,739,146	+		PFLU_RS16480	0.19	+0.9
3,739,146	+		PFLU_RS16480	0.19	-0.1
3,739,146	+		PFLU_RS16480	0.19	-0.6
3,739,146	+		PFLU_RS16480	0.19	+0.3
3,739,146	+		PFLU_RS16480	0.19	-1.6
3,739,146	+		PFLU_RS16480	0.19	+0.3
3,739,147	-		PFLU_RS16480	0.19	+1.0
3,739,147	-		PFLU_RS16480	0.19	-1.6
3,739,147	-		PFLU_RS16480	0.19	-0.2
3,739,147	-		PFLU_RS16480	0.19	-1.4
3,739,147	-		PFLU_RS16480	0.19	+0.9
3,739,147	-		PFLU_RS16480	0.19	+0.3
3,739,147	-		PFLU_RS16480	0.19	+1.5
3,739,169	+		PFLU_RS16480	0.20	-1.4
3,739,354	-		PFLU_RS16480	0.28	-0.9
3,739,385	+		PFLU_RS16480	0.30	+1.2
3,739,425	+		PFLU_RS16480	0.32	-0.9
3,739,426	-		PFLU_RS16480	0.32	+0.2
3,739,465	-		PFLU_RS16480	0.33	-0.0
3,739,465	-		PFLU_RS16480	0.33	+0.3
3,739,479	+		PFLU_RS16480	0.34	-0.6
3,739,479	+		PFLU_RS16480	0.34	-1.4
3,739,479	+		PFLU_RS16480	0.34	-2.5
3,739,479	+		PFLU_RS16480	0.34	-2.9
3,739,480	-		PFLU_RS16480	0.34	-0.1
3,739,480	-		PFLU_RS16480	0.34	+1.9
3,739,480	-		PFLU_RS16480	0.34	+2.1
3,739,480	-		PFLU_RS16480	0.34	-1.7
3,739,557	+		PFLU_RS16480	0.38	-0.8
3,739,558	-		PFLU_RS16480	0.38	+1.0
3,739,558	-		PFLU_RS16480	0.38	-1.2
3,739,558	-		PFLU_RS16480	0.38	-1.8
3,739,605	+		PFLU_RS16480	0.40	-0.6
3,739,605	+		PFLU_RS16480	0.40	-1.3
3,739,605	+		PFLU_RS16480	0.40	+0.9
3,739,605	+		PFLU_RS16480	0.40	-0.8
3,739,606	-		PFLU_RS16480	0.40	+0.0
3,739,606	-		PFLU_RS16480	0.40	-0.7
3,739,617	+		PFLU_RS16480	0.40	+2.6
3,739,617	+		PFLU_RS16480	0.40	+0.4
3,739,618	-		PFLU_RS16480	0.41	-3.3
3,739,618	-		PFLU_RS16480	0.41	-1.6
3,739,618	-		PFLU_RS16480	0.41	+1.9
3,739,618	-		PFLU_RS16480	0.41	+0.7
3,739,618	-		PFLU_RS16480	0.41	-0.4
3,739,618	-		PFLU_RS16480	0.41	+0.7
3,739,618	-		PFLU_RS16480	0.41	-1.6
3,739,666	+		PFLU_RS16480	0.43	-0.9
3,739,725	+		PFLU_RS16480	0.45	+2.6
3,739,725	+		PFLU_RS16480	0.45	-0.9
3,739,725	+		PFLU_RS16480	0.45	-0.6
3,739,725	+		PFLU_RS16480	0.45	+0.3
3,739,726	-		PFLU_RS16480	0.46	+0.2
3,739,726	-		PFLU_RS16480	0.46	+0.6
3,739,726	-		PFLU_RS16480	0.46	+1.7
3,739,726	-		PFLU_RS16480	0.46	+0.7
3,739,726	-		PFLU_RS16480	0.46	-1.7
3,739,758	+		PFLU_RS16480	0.47	+0.7
3,739,812	+		PFLU_RS16480	0.50	+1.5
3,739,812	+		PFLU_RS16480	0.50	-1.3
3,739,813	-		PFLU_RS16480	0.50	-0.1
3,739,874	+		PFLU_RS16480	0.52	-1.6
3,739,875	-		PFLU_RS16480	0.52	-1.8
3,739,875	-		PFLU_RS16480	0.52	-0.6
3,739,911	+		PFLU_RS16480	0.54	-1.3
3,739,912	-		PFLU_RS16480	0.54	-1.1
3,739,912	-		PFLU_RS16480	0.54	-1.7
3,739,912	-		PFLU_RS16480	0.54	-1.4
3,739,912	-		PFLU_RS16480	0.54	+1.6
3,739,912	-		PFLU_RS16480	0.54	+1.9
3,739,912	-		PFLU_RS16480	0.54	-1.3
3,739,932	+		PFLU_RS16480	0.55	+0.3
3,739,932	+		PFLU_RS16480	0.55	-2.0
3,739,932	+		PFLU_RS16480	0.55	-0.7
3,739,932	+		PFLU_RS16480	0.55	+0.3
3,739,933	-		PFLU_RS16480	0.55	+0.9
3,739,933	-		PFLU_RS16480	0.55	-0.6
3,739,933	-		PFLU_RS16480	0.55	-0.5
3,739,933	-		PFLU_RS16480	0.55	+1.9
3,739,933	-		PFLU_RS16480	0.55	+1.9
3,739,933	-		PFLU_RS16480	0.55	+0.3
3,739,933	-		PFLU_RS16480	0.55	+3.5
3,739,941	+		PFLU_RS16480	0.55	+0.1
3,739,941	+		PFLU_RS16480	0.55	-1.6
3,739,942	-		PFLU_RS16480	0.56	-2.0
3,739,989	-		PFLU_RS16480	0.58	-1.7
3,740,029	-		PFLU_RS16480	0.60	-1.8
3,740,029	-		PFLU_RS16480	0.60	-0.7
3,740,029	-		PFLU_RS16480	0.60	+1.1
3,740,094	+		PFLU_RS16480	0.63	+0.9
3,740,094	+		PFLU_RS16480	0.63	-1.7
3,740,094	+		PFLU_RS16480	0.63	-0.7
3,740,095	-		PFLU_RS16480	0.63	+0.2
3,740,095	-		PFLU_RS16480	0.63	-0.4
3,740,100	+		PFLU_RS16480	0.63	+1.7
3,740,100	+		PFLU_RS16480	0.63	-2.5
3,740,100	+		PFLU_RS16480	0.63	+0.7
3,740,101	-		PFLU_RS16480	0.63	-2.4
3,740,101	-		PFLU_RS16480	0.63	+0.4
3,740,130	+		PFLU_RS16480	0.64	-0.3
3,740,130	+		PFLU_RS16480	0.64	+0.8
3,740,130	+		PFLU_RS16480	0.64	-1.4
3,740,131	-		PFLU_RS16480	0.64	-1.8
3,740,131	-		PFLU_RS16480	0.64	-0.9
3,740,131	-		PFLU_RS16480	0.64	+0.3
3,740,131	-		PFLU_RS16480	0.64	+0.8
3,740,131	-		PFLU_RS16480	0.64	+2.5
3,740,131	-		PFLU_RS16480	0.64	-0.1
3,740,132	+		PFLU_RS16480	0.64	+0.6
3,740,132	+		PFLU_RS16480	0.64	+1.9
3,740,132	+		PFLU_RS16480	0.64	-1.8
3,740,132	+		PFLU_RS16480	0.64	+0.7
3,740,132	+		PFLU_RS16480	0.64	+2.0
3,740,132	+		PFLU_RS16480	0.64	-1.4
3,740,132	+		PFLU_RS16480	0.64	+1.4
3,740,132	+		PFLU_RS16480	0.64	+0.6
3,740,132	+		PFLU_RS16480	0.64	-1.6
3,740,132	+		PFLU_RS16480	0.64	-1.7
3,740,133	-		PFLU_RS16480	0.64	-2.9
3,740,133	-		PFLU_RS16480	0.64	-2.4
3,740,133	-		PFLU_RS16480	0.64	-0.1
3,740,133	-		PFLU_RS16480	0.64	-1.3
3,740,133	-		PFLU_RS16480	0.64	+0.2
3,740,133	-		PFLU_RS16480	0.64	-0.1
3,740,133	-		PFLU_RS16480	0.64	+1.1
3,740,133	-		PFLU_RS16480	0.64	+0.6
3,740,133	-		PFLU_RS16480	0.64	+0.8
3,740,133	-		PFLU_RS16480	0.64	+1.2
3,740,133	-		PFLU_RS16480	0.64	+0.5
3,740,133	-		PFLU_RS16480	0.64	+1.9
3,740,172	+		PFLU_RS16480	0.66	+1.9
3,740,172	+		PFLU_RS16480	0.66	-2.8
3,740,172	+		PFLU_RS16480	0.66	+0.4
3,740,172	+		PFLU_RS16480	0.66	+0.3
3,740,172	+		PFLU_RS16480	0.66	+1.4
3,740,173	-		PFLU_RS16480	0.66	+1.5
3,740,199	+		PFLU_RS16480	0.67	-0.7
3,740,199	+		PFLU_RS16480	0.67	+0.1
3,740,199	+		PFLU_RS16480	0.67	+0.5
3,740,199	+		PFLU_RS16480	0.67	+0.9
3,740,199	+		PFLU_RS16480	0.67	-0.1
3,740,199	+		PFLU_RS16480	0.67	-1.3
3,740,199	+		PFLU_RS16480	0.67	-1.2
3,740,199	+		PFLU_RS16480	0.67	-0.1
3,740,199	+		PFLU_RS16480	0.67	+0.6
3,740,199	+		PFLU_RS16480	0.67	-1.7
3,740,199	+		PFLU_RS16480	0.67	-0.1
3,740,199	+		PFLU_RS16480	0.67	-0.1
3,740,200	-		PFLU_RS16480	0.67	-2.2
3,740,200	-		PFLU_RS16480	0.67	-1.4
3,740,200	-		PFLU_RS16480	0.67	+2.1
3,740,200	-		PFLU_RS16480	0.67	-0.3
3,740,208	+		PFLU_RS16480	0.68	+0.0
3,740,208	+		PFLU_RS16480	0.68	-0.2
3,740,208	+		PFLU_RS16480	0.68	-1.4
3,740,209	-		PFLU_RS16480	0.68	-0.3
3,740,283	+		PFLU_RS16480	0.71	+0.0
3,740,283	+		PFLU_RS16480	0.71	+1.1
3,740,283	+		PFLU_RS16480	0.71	-1.1
3,740,283	+		PFLU_RS16480	0.71	-0.9
3,740,283	+		PFLU_RS16480	0.71	+1.4
3,740,283	+		PFLU_RS16480	0.71	-1.9
3,740,283	+		PFLU_RS16480	0.71	+2.9
3,740,283	+		PFLU_RS16480	0.71	-1.3
3,740,283	+		PFLU_RS16480	0.71	-1.4
3,740,284	-		PFLU_RS16480	0.71	+0.9
3,740,284	-		PFLU_RS16480	0.71	-0.9
3,740,284	-		PFLU_RS16480	0.71	+0.0
3,740,284	-		PFLU_RS16480	0.71	-0.9
3,740,284	-		PFLU_RS16480	0.71	-2.9
3,740,284	-		PFLU_RS16480	0.71	+1.9
3,740,307	+		PFLU_RS16480	0.72	+0.6
3,740,308	-		PFLU_RS16480	0.72	+1.9
3,740,308	-		PFLU_RS16480	0.72	-1.4
3,740,378	-		PFLU_RS16480	0.76	-0.9
3,740,496	+		PFLU_RS16480	0.81	-1.9
3,740,497	-		PFLU_RS16480	0.81	+1.5
3,740,502	+		PFLU_RS16480	0.81	+0.9
3,740,502	+		PFLU_RS16480	0.81	-1.3
3,740,502	+		PFLU_RS16480	0.81	-1.0
3,740,503	-		PFLU_RS16480	0.81	+2.7
3,740,503	-		PFLU_RS16480	0.81	+0.4
3,740,503	-		PFLU_RS16480	0.81	-0.1
3,740,503	-		PFLU_RS16480	0.81	-0.1
3,740,503	-		PFLU_RS16480	0.81	-1.6
3,740,503	-		PFLU_RS16480	0.81	+1.7
3,740,510	+		PFLU_RS16480	0.82	+0.7
3,740,510	+		PFLU_RS16480	0.82	+1.3
3,740,510	+		PFLU_RS16480	0.82	+1.3
3,740,510	+		PFLU_RS16480	0.82	+0.9
3,740,510	+		PFLU_RS16480	0.82	+1.5
3,740,510	+		PFLU_RS16480	0.82	+3.3
3,740,510	+		PFLU_RS16480	0.82	-0.7
3,740,511	-		PFLU_RS16480	0.82	-1.6
3,740,511	-		PFLU_RS16480	0.82	+1.1
3,740,670	+		PFLU_RS16480	0.89	+2.3
3,740,670	+		PFLU_RS16480	0.89	-2.3
3,740,670	+		PFLU_RS16480	0.89	+0.9
3,740,670	+		PFLU_RS16480	0.89	-1.8
3,740,671	-		PFLU_RS16480	0.89	-0.7
3,740,671	-		PFLU_RS16480	0.89	-1.7
3,740,671	-		PFLU_RS16480	0.89	+0.6
3,740,671	-		PFLU_RS16480	0.89	-0.9
3,740,671	-		PFLU_RS16480	0.89	-0.3
3,740,671	-		PFLU_RS16480	0.89	+1.8
3,740,671	-		PFLU_RS16480	0.89	-1.7
3,740,671	-		PFLU_RS16480	0.89	+3.6
3,740,671	-		PFLU_RS16480	0.89	-1.3
3,740,703	+				-2.4
3,740,703	+				+1.4
3,740,704	-				+1.6
3,740,725	-				+2.6
3,740,795	+				-0.7
3,740,795	+				+0.5
3,740,795	+				+0.6
3,740,795	+				+1.1
3,740,795	+				+1.4
3,740,795	+				-0.4
3,740,796	-				+0.3
3,740,796	-				+0.9
3,740,796	-				-2.4
3,740,796	-				+0.3
3,740,796	-				+0.9
3,740,812	-				-1.1
3,740,812	-				+2.8
3,740,814	+				-1.9
3,740,814	+				+0.7
3,740,815	-				-2.6
3,740,815	-				+0.7
3,740,815	-				-1.2
3,740,815	-				-0.1
3,740,815	-				-0.7
3,740,841	+				-1.8
3,740,841	+				-0.2
3,740,841	+				+0.9
3,740,842	-				+0.9
3,740,856	+				-0.9
3,740,857	-				+0.9
3,740,892	+				-0.5
3,740,892	+				+0.7
3,740,892	+				+1.4
3,740,892	+				-1.1
3,740,893	-				-2.0
3,740,893	-				+1.3
3,740,893	-				+1.0
3,740,916	-				+0.7
3,740,924	-				+1.3
3,741,008	-				-1.9
3,741,074	+				-0.5
3,741,075	-				+0.5
3,741,075	-				+1.3
3,741,075	-				+0.9
3,741,075	-				-0.1
3,741,539	+		PFLU_RS16485	0.30	-1.1
3,741,539	+		PFLU_RS16485	0.30	-1.5
3,741,539	+		PFLU_RS16485	0.30	-1.1
3,741,539	+		PFLU_RS16485	0.30	+0.1
3,741,539	+		PFLU_RS16485	0.30	-0.5
3,741,539	+		PFLU_RS16485	0.30	-1.5
3,741,540	-		PFLU_RS16485	0.31	+1.1
3,741,569	+		PFLU_RS16485	0.32	-1.9
3,741,569	+		PFLU_RS16485	0.32	-1.6
3,741,569	+		PFLU_RS16485	0.32	-0.1
3,741,570	-		PFLU_RS16485	0.33	+2.3
3,741,570	-		PFLU_RS16485	0.33	+2.7
3,741,637	+		PFLU_RS16485	0.37	-2.9
3,741,638	-		PFLU_RS16485	0.37	+0.7
3,741,638	-		PFLU_RS16485	0.37	+1.5
3,741,730	+		PFLU_RS16485	0.43	+0.7
3,741,731	-		PFLU_RS16485	0.43	+0.7