Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08685

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
1,929,356	+		PFLU_RS08675	0.13	+4.4
1,929,563	+		PFLU_RS08675	0.52	+4.2
1,929,564	-		PFLU_RS08675	0.52	+5.0
1,929,575	+		PFLU_RS08675	0.54	+4.3
1,929,575	+		PFLU_RS08675	0.54	+3.3
1,929,576	-		PFLU_RS08675	0.54	+3.7
1,929,576	-		PFLU_RS08675	0.54	+7.1
1,929,683	+		PFLU_RS08675	0.74	+3.5
1,929,737	+		PFLU_RS08675	0.84	+4.1
1,929,737	+		PFLU_RS08675	0.84	+5.9
1,929,737	+		PFLU_RS08675	0.84	+5.5
1,929,738	-		PFLU_RS08675	0.85	+4.8
1,929,738	-		PFLU_RS08675	0.85	+3.5
1,929,738	-		PFLU_RS08675	0.85	+2.4
1,929,889	+		PFLU_RS08680	0.15	+5.2
1,929,889	+		PFLU_RS08680	0.15	+5.1
1,929,890	-		PFLU_RS08680	0.15	+2.8
1,930,409	+		PFLU_RS08685	0.11	-0.0
1,930,410	-		PFLU_RS08685	0.11	+3.3
1,930,410	-		PFLU_RS08685	0.11	+4.4
1,930,455	+		PFLU_RS08685	0.14	+0.6
1,930,455	+		PFLU_RS08685	0.14	-1.9
1,930,610	+		PFLU_RS08685	0.28	+1.8
1,930,610	+		PFLU_RS08685	0.28	+1.9
1,930,611	-		PFLU_RS08685	0.28	+2.3
1,930,742	+		PFLU_RS08685	0.39	+1.1
1,930,742	+		PFLU_RS08685	0.39	+2.7
1,930,742	+		PFLU_RS08685	0.39	+1.3
1,930,742	+		PFLU_RS08685	0.39	-2.0
1,930,742	+		PFLU_RS08685	0.39	+1.3
1,930,742	+		PFLU_RS08685	0.39	-1.1
1,930,742	+		PFLU_RS08685	0.39	+1.0
1,930,743	-		PFLU_RS08685	0.39	-0.8
1,930,743	-		PFLU_RS08685	0.39	+1.5
1,930,743	-		PFLU_RS08685	0.39	+2.4
1,930,743	-		PFLU_RS08685	0.39	+1.0
1,930,743	-		PFLU_RS08685	0.39	-0.3
1,930,760	+		PFLU_RS08685	0.40	+1.6
1,930,760	+		PFLU_RS08685	0.40	-0.4
1,930,761	-		PFLU_RS08685	0.40	+0.7
1,930,761	-		PFLU_RS08685	0.40	-0.1
1,930,761	-		PFLU_RS08685	0.40	+1.0
1,930,761	-		PFLU_RS08685	0.40	+1.4
1,930,866	-		PFLU_RS08685	0.49	+1.5
1,931,010	-		PFLU_RS08685	0.61	-0.4
1,931,199	+		PFLU_RS08685	0.77	-1.6
1,931,199	+		PFLU_RS08685	0.77	+0.2
1,931,199	+		PFLU_RS08685	0.77	-0.8
1,931,199	+		PFLU_RS08685	0.77	-1.3
1,931,199	+		PFLU_RS08685	0.77	-0.6
1,931,199	+		PFLU_RS08685	0.77	+1.8
1,931,199	+		PFLU_RS08685	0.77	+0.6
1,931,199	+		PFLU_RS08685	0.77	+0.5
1,931,199	+		PFLU_RS08685	0.77	-0.6
1,931,199	+		PFLU_RS08685	0.77	+0.2
1,931,199	+		PFLU_RS08685	0.77	-2.9
1,931,199	+		PFLU_RS08685	0.77	+1.3
1,931,199	+		PFLU_RS08685	0.77	+1.5
1,931,199	+		PFLU_RS08685	0.77	+0.8
1,931,199	+		PFLU_RS08685	0.77	+0.9
1,931,200	-		PFLU_RS08685	0.77	+1.3
1,931,200	-		PFLU_RS08685	0.77	+1.5
1,931,200	-		PFLU_RS08685	0.77	-1.8
1,931,200	-		PFLU_RS08685	0.77	+0.5
1,931,200	-		PFLU_RS08685	0.77	-1.1
1,931,200	-		PFLU_RS08685	0.77	-2.4
1,931,200	-		PFLU_RS08685	0.77	-0.6
1,931,200	-		PFLU_RS08685	0.77	-0.7
1,931,200	-		PFLU_RS08685	0.77	+0.4
1,931,200	-		PFLU_RS08685	0.77	-0.8
1,931,200	-		PFLU_RS08685	0.77	+0.9
1,931,200	-		PFLU_RS08685	0.77	-0.4
1,931,200	-		PFLU_RS08685	0.77	-0.8
1,931,200	-		PFLU_RS08685	0.77	+1.6
1,931,200	-		PFLU_RS08685	0.77	+0.4
1,931,200	-		PFLU_RS08685	0.77	+0.4
1,931,203	+		PFLU_RS08685	0.77	-0.6
1,931,203	+		PFLU_RS08685	0.77	-2.2
1,931,203	+		PFLU_RS08685	0.77	+2.7
1,931,204	-		PFLU_RS08685	0.78	-1.7
1,931,204	-		PFLU_RS08685	0.78	-1.4
1,931,204	-		PFLU_RS08685	0.78	-0.5
1,931,468	+				+2.2
1,931,468	+				-0.8
1,931,468	+				+2.7
1,931,468	+				-2.9
1,931,468	+				+1.2
1,931,468	+				-0.9
1,931,469	-				-0.4
1,931,469	-				-0.6
1,931,469	-				+0.9
1,931,469	-				+1.2
1,931,469	-				+0.1
1,931,485	+				-2.6
1,931,486	-				+0.9
1,931,486	-				+1.4
1,931,486	-				-1.8
1,931,726	+		PFLU_RS08690	0.61	-2.3
1,931,726	+		PFLU_RS08690	0.61	-1.6
1,931,726	+		PFLU_RS08690	0.61	-2.1
1,931,726	+		PFLU_RS08690	0.61	-0.9
1,931,726	+		PFLU_RS08690	0.61	-0.6
1,931,726	+		PFLU_RS08690	0.61	-0.5
1,931,726	+		PFLU_RS08690	0.61	+1.1
1,931,726	+		PFLU_RS08690	0.61	-2.4
1,931,726	+		PFLU_RS08690	0.61	-1.5
1,931,726	+		PFLU_RS08690	0.61	-2.1
1,931,726	+		PFLU_RS08690	0.61	-1.5
1,931,726	+		PFLU_RS08690	0.61	+1.3
1,931,726	+		PFLU_RS08690	0.61	-0.2
1,931,727	-		PFLU_RS08690	0.61	+0.7
1,931,727	-		PFLU_RS08690	0.61	+1.7
1,931,727	-		PFLU_RS08690	0.61	+1.2
1,931,727	-		PFLU_RS08690	0.61	-1.0
1,931,727	-		PFLU_RS08690	0.61	+0.1
1,931,727	-		PFLU_RS08690	0.61	-0.8
1,931,727	-		PFLU_RS08690	0.61	-0.6
1,931,727	-		PFLU_RS08690	0.61	-0.6
1,931,727	-		PFLU_RS08690	0.61	-1.5
1,931,756	+		PFLU_RS08690	0.68	+1.4
1,931,757	-		PFLU_RS08690	0.68	+2.2
1,931,771	+		PFLU_RS08690	0.72	+1.6
1,931,771	+		PFLU_RS08690	0.72	+0.0
1,931,771	+		PFLU_RS08690	0.72	+0.6
1,931,771	+		PFLU_RS08690	0.72	-1.5
1,931,771	+		PFLU_RS08690	0.72	+0.8
1,931,771	+		PFLU_RS08690	0.72	-1.1
1,931,771	+		PFLU_RS08690	0.72	+1.5
1,931,771	+		PFLU_RS08690	0.72	+1.8
1,931,772	-		PFLU_RS08690	0.72	+1.1
1,931,772	-		PFLU_RS08690	0.72	-2.4
1,931,772	-		PFLU_RS08690	0.72	+1.4
1,931,772	-		PFLU_RS08690	0.72	-0.3
1,931,772	-		PFLU_RS08690	0.72	+0.7
1,931,772	-		PFLU_RS08690	0.72	+0.4
1,931,772	-		PFLU_RS08690	0.72	-0.1
1,931,772	-		PFLU_RS08690	0.72	+0.1
1,931,772	-		PFLU_RS08690	0.72	-1.2
1,931,772	-		PFLU_RS08690	0.72	-3.1
1,931,772	-		PFLU_RS08690	0.72	-1.0
1,931,772	-		PFLU_RS08690	0.72	-2.9
1,931,772	-		PFLU_RS08690	0.72	-2.2
1,931,772	-		PFLU_RS08690	0.72	+0.6
1,931,774	+		PFLU_RS08690	0.73	-0.6
1,931,774	+		PFLU_RS08690	0.73	+0.8
1,931,774	+		PFLU_RS08690	0.73	+1.1
1,931,775	-		PFLU_RS08690	0.73	+1.5
1,931,859	+				-1.2
1,931,870	+				-0.0
1,931,870	+				+1.0
1,932,008	+				-0.1
1,932,009	-				+0.5
1,932,194	+		PFLU_RS08695	0.44	-1.5
1,932,194	+		PFLU_RS08695	0.44	-0.4
1,932,194	+		PFLU_RS08695	0.44	-0.3
1,932,194	+		PFLU_RS08695	0.44	-0.8
1,932,194	+		PFLU_RS08695	0.44	+1.2
1,932,194	+		PFLU_RS08695	0.44	+0.7
1,932,194	+		PFLU_RS08695	0.44	+1.7
1,932,194	+		PFLU_RS08695	0.44	+1.7
1,932,195	-		PFLU_RS08695	0.44	-2.6
1,932,195	-		PFLU_RS08695	0.44	+0.1
1,932,195	-		PFLU_RS08695	0.44	-0.1
1,932,195	-		PFLU_RS08695	0.44	+0.2
1,932,195	-		PFLU_RS08695	0.44	-0.1
1,932,353	+				-0.1
1,932,353	+				+0.2
1,932,353	+				+1.9
1,932,353	+				+1.6
1,932,353	+				+0.5
1,932,353	+				+0.2
1,932,353	+				-1.3
1,932,354	-				-2.1
1,932,354	-				-0.5
1,932,354	-				-1.3
1,932,413	+				+2.5
1,932,413	+				-0.3
1,932,456	-				-0.5
1,932,456	-				-0.1
1,932,456	-				-2.4
1,932,456	-				+1.3