Experiment: Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22915 and BWI76_RS22920 are separated by 559 nucleotides BWI76_RS22920 and BWI76_RS22925 are separated by 31 nucleotides
BWI76_RS22915: BWI76_RS22915 - L-fuculose phosphate aldolase (EC 4.1.2.17) (from data) , at 4,784,123 to 4,784,770
_RS22915
BWI76_RS22920: BWI76_RS22920 - MFS transporter, at 4,785,330 to 4,786,640
_RS22920
BWI76_RS22925: BWI76_RS22925 - L-fucose isomerase, at 4,786,672 to 4,788,447
_RS22925
Position (kb)
4785
4786
4787 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4784.356 kb on + strand, within BWI76_RS22915 at 4784.409 kb on - strand, within BWI76_RS22915 at 4784.409 kb on - strand, within BWI76_RS22915 at 4784.419 kb on - strand, within BWI76_RS22915 at 4784.495 kb on + strand, within BWI76_RS22915 at 4784.512 kb on + strand at 4784.558 kb on + strand, within BWI76_RS22915 at 4784.605 kb on - strand, within BWI76_RS22915 at 4784.605 kb on - strand, within BWI76_RS22915 at 4784.624 kb on - strand, within BWI76_RS22915 at 4784.641 kb on + strand, within BWI76_RS22915 at 4784.651 kb on + strand, within BWI76_RS22915 at 4784.664 kb on - strand, within BWI76_RS22915 at 4784.664 kb on - strand, within BWI76_RS22915 at 4784.670 kb on - strand, within BWI76_RS22915 at 4784.684 kb on - strand, within BWI76_RS22915 at 4784.684 kb on - strand, within BWI76_RS22915 at 4784.691 kb on + strand, within BWI76_RS22915 at 4784.699 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.704 kb on - strand, within BWI76_RS22915 at 4784.709 kb on - strand at 4784.709 kb on - strand at 4784.709 kb on - strand at 4784.709 kb on - strand at 4784.730 kb on - strand at 4784.730 kb on - strand at 4784.730 kb on - strand at 4784.730 kb on - strand at 4784.732 kb on + strand at 4784.740 kb on - strand at 4784.740 kb on - strand at 4784.740 kb on - strand at 4784.753 kb on - strand at 4784.762 kb on - strand at 4784.762 kb on - strand at 4784.762 kb on - strand at 4784.763 kb on - strand at 4784.763 kb on - strand at 4784.763 kb on - strand at 4784.767 kb on - strand at 4784.794 kb on - strand at 4784.827 kb on - strand at 4784.835 kb on + strand at 4784.835 kb on + strand at 4784.837 kb on + strand at 4784.843 kb on - strand at 4784.866 kb on - strand at 4784.887 kb on - strand at 4784.905 kb on + strand at 4784.905 kb on + strand at 4784.910 kb on + strand at 4784.910 kb on + strand at 4784.913 kb on - strand at 4784.913 kb on - strand at 4785.026 kb on - strand at 4785.149 kb on + strand at 4785.155 kb on + strand at 4785.230 kb on + strand at 4785.236 kb on - strand at 4785.248 kb on - strand at 4785.256 kb on + strand at 4785.265 kb on + strand at 4785.284 kb on + strand at 4785.285 kb on + strand at 4785.285 kb on + strand at 4785.285 kb on + strand at 4785.292 kb on - strand at 4785.293 kb on - strand at 4785.293 kb on - strand at 4785.308 kb on + strand at 4785.308 kb on + strand at 4785.308 kb on + strand at 4785.316 kb on - strand at 4785.316 kb on - strand at 4785.343 kb on - strand at 4785.368 kb on + strand at 4785.386 kb on - strand at 4785.394 kb on + strand at 4785.397 kb on - strand at 4785.397 kb on - strand at 4785.397 kb on - strand at 4785.402 kb on - strand at 4785.404 kb on - strand at 4785.410 kb on - strand at 4785.411 kb on - strand at 4785.416 kb on - strand at 4785.416 kb on - strand at 4785.416 kb on - strand at 4785.416 kb on - strand at 4785.416 kb on - strand at 4785.416 kb on - strand at 4785.421 kb on - strand at 4785.421 kb on - strand at 4785.495 kb on - strand, within BWI76_RS22920 at 4785.495 kb on - strand, within BWI76_RS22920 at 4785.495 kb on - strand, within BWI76_RS22920 at 4785.518 kb on + strand, within BWI76_RS22920 at 4785.561 kb on - strand, within BWI76_RS22920 at 4785.617 kb on + strand, within BWI76_RS22920 at 4785.617 kb on + strand, within BWI76_RS22920 at 4785.617 kb on + strand, within BWI76_RS22920 at 4785.620 kb on - strand, within BWI76_RS22920 at 4785.639 kb on + strand, within BWI76_RS22920 at 4785.639 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.644 kb on + strand, within BWI76_RS22920 at 4785.647 kb on - strand, within BWI76_RS22920 at 4785.647 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.652 kb on - strand, within BWI76_RS22920 at 4785.655 kb on + strand, within BWI76_RS22920 at 4785.663 kb on + strand, within BWI76_RS22920 at 4785.671 kb on - strand at 4785.676 kb on + strand, within BWI76_RS22920 at 4785.676 kb on - strand, within BWI76_RS22920 at 4785.695 kb on + strand, within BWI76_RS22920 at 4785.695 kb on + strand, within BWI76_RS22920 at 4785.703 kb on - strand, within BWI76_RS22920 at 4785.703 kb on - strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.711 kb on + strand, within BWI76_RS22920 at 4785.719 kb on - strand, within BWI76_RS22920 at 4785.719 kb on - strand, within BWI76_RS22920 at 4785.719 kb on - strand, within BWI76_RS22920 at 4785.719 kb on - strand, within BWI76_RS22920 at 4785.719 kb on - strand, within BWI76_RS22920 at 4785.779 kb on + strand, within BWI76_RS22920 at 4785.779 kb on + strand, within BWI76_RS22920 at 4785.779 kb on + strand, within BWI76_RS22920 at 4785.784 kb on + strand, within BWI76_RS22920 at 4785.784 kb on + strand, within BWI76_RS22920 at 4785.784 kb on + strand, within BWI76_RS22920 at 4785.785 kb on + strand, within BWI76_RS22920 at 4785.795 kb on + strand, within BWI76_RS22920 at 4785.802 kb on + strand, within BWI76_RS22920 at 4785.802 kb on + strand, within BWI76_RS22920 at 4785.804 kb on + strand, within BWI76_RS22920 at 4785.810 kb on - strand, within BWI76_RS22920 at 4785.819 kb on - strand, within BWI76_RS22920 at 4785.847 kb on + strand, within BWI76_RS22920 at 4785.847 kb on + strand, within BWI76_RS22920 at 4785.847 kb on + strand, within BWI76_RS22920 at 4785.847 kb on + strand, within BWI76_RS22920 at 4785.847 kb on + strand, within BWI76_RS22920 at 4785.855 kb on - strand, within BWI76_RS22920 at 4785.855 kb on - strand, within BWI76_RS22920 at 4785.856 kb on + strand, within BWI76_RS22920 at 4785.892 kb on + strand, within BWI76_RS22920 at 4785.901 kb on + strand, within BWI76_RS22920 at 4785.901 kb on + strand, within BWI76_RS22920 at 4785.909 kb on - strand, within BWI76_RS22920 at 4785.911 kb on + strand, within BWI76_RS22920 at 4785.911 kb on + strand, within BWI76_RS22920 at 4785.911 kb on + strand, within BWI76_RS22920 at 4785.911 kb on + strand, within BWI76_RS22920 at 4785.911 kb on + strand, within BWI76_RS22920 at 4785.919 kb on - strand, within BWI76_RS22920 at 4785.919 kb on - strand, within BWI76_RS22920 at 4785.919 kb on - strand, within BWI76_RS22920 at 4785.920 kb on - strand, within BWI76_RS22920 at 4785.921 kb on + strand, within BWI76_RS22920 at 4785.926 kb on + strand, within BWI76_RS22920 at 4785.926 kb on + strand, within BWI76_RS22920 at 4785.926 kb on + strand, within BWI76_RS22920 at 4785.931 kb on + strand, within BWI76_RS22920 at 4785.931 kb on + strand, within BWI76_RS22920 at 4785.935 kb on + strand, within BWI76_RS22920 at 4785.962 kb on - strand, within BWI76_RS22920 at 4785.978 kb on + strand, within BWI76_RS22920 at 4786.053 kb on - strand, within BWI76_RS22920 at 4786.113 kb on + strand, within BWI76_RS22920 at 4786.124 kb on + strand, within BWI76_RS22920 at 4786.132 kb on - strand, within BWI76_RS22920 at 4786.323 kb on - strand, within BWI76_RS22920 at 4786.514 kb on - strand at 4786.524 kb on - strand at 4786.759 kb on + strand at 4786.820 kb on - strand at 4786.948 kb on - strand, within BWI76_RS22925 at 4787.415 kb on + strand, within BWI76_RS22925 at 4787.423 kb on - strand, within BWI76_RS22925 at 4787.439 kb on - strand, within BWI76_RS22925 at 4787.633 kb on - strand, within BWI76_RS22925
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM remove 4,784,356 + BWI76_RS22915 0.36 -0.5 4,784,409 - BWI76_RS22915 0.44 -0.6 4,784,409 - BWI76_RS22915 0.44 +0.0 4,784,419 - BWI76_RS22915 0.46 -0.3 4,784,495 + BWI76_RS22915 0.57 +0.5 4,784,512 + +1.0 4,784,558 + BWI76_RS22915 0.67 -0.1 4,784,605 - BWI76_RS22915 0.74 -0.3 4,784,605 - BWI76_RS22915 0.74 -1.5 4,784,624 - BWI76_RS22915 0.77 +0.5 4,784,641 + BWI76_RS22915 0.80 -0.8 4,784,651 + BWI76_RS22915 0.81 -0.5 4,784,664 - BWI76_RS22915 0.83 +0.8 4,784,664 - BWI76_RS22915 0.83 -0.7 4,784,670 - BWI76_RS22915 0.84 +2.3 4,784,684 - BWI76_RS22915 0.87 +0.2 4,784,684 - BWI76_RS22915 0.87 -1.1 4,784,691 + BWI76_RS22915 0.88 -2.7 4,784,699 - BWI76_RS22915 0.89 -0.1 4,784,704 - BWI76_RS22915 0.90 -0.5 4,784,704 - BWI76_RS22915 0.90 -0.5 4,784,704 - BWI76_RS22915 0.90 -1.0 4,784,704 - BWI76_RS22915 0.90 +0.8 4,784,704 - BWI76_RS22915 0.90 -0.6 4,784,704 - BWI76_RS22915 0.90 +1.2 4,784,709 - +0.9 4,784,709 - -0.9 4,784,709 - +1.2 4,784,709 - -2.1 4,784,730 - -0.5 4,784,730 - +0.8 4,784,730 - -0.9 4,784,730 - -0.4 4,784,732 + -2.7 4,784,740 - -0.4 4,784,740 - -0.5 4,784,740 - +0.1 4,784,753 - +0.0 4,784,762 - -1.4 4,784,762 - -1.5 4,784,762 - -0.3 4,784,763 - -0.1 4,784,763 - -1.5 4,784,763 - +1.0 4,784,767 - -1.3 4,784,794 - +2.0 4,784,827 - -0.6 4,784,835 + +1.0 4,784,835 + +1.0 4,784,837 + +1.0 4,784,843 - +0.0 4,784,866 - +1.0 4,784,887 - -0.7 4,784,905 + +1.0 4,784,905 + -0.2 4,784,910 + -1.2 4,784,910 + +0.3 4,784,913 - -0.3 4,784,913 - +0.1 4,785,026 - -0.4 4,785,149 + +1.0 4,785,155 + -1.1 4,785,230 + +2.4 4,785,236 - -1.3 4,785,248 - +0.5 4,785,256 + +0.5 4,785,265 + -1.5 4,785,284 + -2.4 4,785,285 + +1.0 4,785,285 + -0.5 4,785,285 + +0.0 4,785,292 - -2.3 4,785,293 - -1.0 4,785,293 - -1.9 4,785,308 + -1.5 4,785,308 + +0.0 4,785,308 + -1.0 4,785,316 - -1.0 4,785,316 - +0.0 4,785,343 - +1.4 4,785,368 + -1.0 4,785,386 - -1.2 4,785,394 + -1.3 4,785,397 - -0.5 4,785,397 - +0.0 4,785,397 - -1.0 4,785,402 - +1.8 4,785,404 - +0.0 4,785,410 - -1.3 4,785,411 - +0.5 4,785,416 - +2.6 4,785,416 - -0.5 4,785,416 - +0.0 4,785,416 - -1.5 4,785,416 - -0.5 4,785,416 - +0.0 4,785,421 - -1.1 4,785,421 - -0.3 4,785,495 - BWI76_RS22920 0.13 +0.9 4,785,495 - BWI76_RS22920 0.13 -1.0 4,785,495 - BWI76_RS22920 0.13 -1.0 4,785,518 + BWI76_RS22920 0.14 +0.0 4,785,561 - BWI76_RS22920 0.18 -1.8 4,785,617 + BWI76_RS22920 0.22 +1.0 4,785,617 + BWI76_RS22920 0.22 -0.5 4,785,617 + BWI76_RS22920 0.22 +1.0 4,785,620 - BWI76_RS22920 0.22 -1.3 4,785,639 + BWI76_RS22920 0.24 -0.2 4,785,639 + BWI76_RS22920 0.24 +0.0 4,785,644 + BWI76_RS22920 0.24 -1.5 4,785,644 + BWI76_RS22920 0.24 -0.5 4,785,644 + BWI76_RS22920 0.24 -2.5 4,785,644 + BWI76_RS22920 0.24 -1.5 4,785,644 + BWI76_RS22920 0.24 -2.3 4,785,644 + BWI76_RS22920 0.24 +0.0 4,785,644 + BWI76_RS22920 0.24 +1.0 4,785,644 + BWI76_RS22920 0.24 -0.5 4,785,644 + BWI76_RS22920 0.24 -1.5 4,785,647 - BWI76_RS22920 0.24 +0.0 4,785,647 - BWI76_RS22920 0.24 -1.8 4,785,652 - +0.0 4,785,652 - BWI76_RS22920 0.25 +0.5 4,785,652 - BWI76_RS22920 0.25 +0.0 4,785,652 - BWI76_RS22920 0.25 +1.0 4,785,652 - BWI76_RS22920 0.25 +0.0 4,785,652 - BWI76_RS22920 0.25 -1.0 4,785,652 - BWI76_RS22920 0.25 -1.9 4,785,655 + BWI76_RS22920 0.25 +0.5 4,785,663 + BWI76_RS22920 0.25 -1.4 4,785,671 - +1.0 4,785,676 + BWI76_RS22920 0.26 +0.0 4,785,676 - BWI76_RS22920 0.26 +1.0 4,785,695 + BWI76_RS22920 0.28 -3.1 4,785,695 + BWI76_RS22920 0.28 +1.5 4,785,703 - BWI76_RS22920 0.28 +0.2 4,785,703 - BWI76_RS22920 0.28 +1.0 4,785,711 + BWI76_RS22920 0.29 +0.8 4,785,711 + BWI76_RS22920 0.29 -1.3 4,785,711 + BWI76_RS22920 0.29 +3.4 4,785,711 + BWI76_RS22920 0.29 -0.3 4,785,711 + BWI76_RS22920 0.29 +0.5 4,785,711 + BWI76_RS22920 0.29 +0.0 4,785,711 + BWI76_RS22920 0.29 -0.5 4,785,719 - BWI76_RS22920 0.30 +1.0 4,785,719 - BWI76_RS22920 0.30 -1.0 4,785,719 - BWI76_RS22920 0.30 -1.3 4,785,719 - BWI76_RS22920 0.30 +0.2 4,785,719 - BWI76_RS22920 0.30 -1.0 4,785,779 + BWI76_RS22920 0.34 -1.5 4,785,779 + BWI76_RS22920 0.34 -0.5 4,785,779 + BWI76_RS22920 0.34 -0.8 4,785,784 + BWI76_RS22920 0.35 +0.8 4,785,784 + BWI76_RS22920 0.35 +1.0 4,785,784 + BWI76_RS22920 0.35 -2.3 4,785,785 + BWI76_RS22920 0.35 -2.0 4,785,795 + BWI76_RS22920 0.35 -1.5 4,785,802 + BWI76_RS22920 0.36 -1.8 4,785,802 + BWI76_RS22920 0.36 +0.0 4,785,804 + BWI76_RS22920 0.36 -0.7 4,785,810 - BWI76_RS22920 0.37 +0.0 4,785,819 - BWI76_RS22920 0.37 +1.3 4,785,847 + BWI76_RS22920 0.39 +0.0 4,785,847 + BWI76_RS22920 0.39 +0.6 4,785,847 + BWI76_RS22920 0.39 -2.1 4,785,847 + BWI76_RS22920 0.39 -3.3 4,785,847 + BWI76_RS22920 0.39 -0.9 4,785,855 - BWI76_RS22920 0.40 +0.0 4,785,855 - BWI76_RS22920 0.40 +0.6 4,785,856 + BWI76_RS22920 0.40 -2.0 4,785,892 + BWI76_RS22920 0.43 +1.3 4,785,901 + BWI76_RS22920 0.44 -0.8 4,785,901 + BWI76_RS22920 0.44 -1.0 4,785,909 - BWI76_RS22920 0.44 -0.5 4,785,911 + BWI76_RS22920 0.44 -0.3 4,785,911 + BWI76_RS22920 0.44 -0.3 4,785,911 + BWI76_RS22920 0.44 -0.2 4,785,911 + BWI76_RS22920 0.44 +1.0 4,785,911 + BWI76_RS22920 0.44 -1.6 4,785,919 - BWI76_RS22920 0.45 -0.5 4,785,919 - BWI76_RS22920 0.45 -0.8 4,785,919 - BWI76_RS22920 0.45 -1.0 4,785,920 - BWI76_RS22920 0.45 +1.0 4,785,921 + BWI76_RS22920 0.45 -2.4 4,785,926 + BWI76_RS22920 0.45 -0.3 4,785,926 + BWI76_RS22920 0.45 -1.9 4,785,926 + BWI76_RS22920 0.45 -1.3 4,785,931 + BWI76_RS22920 0.46 -1.1 4,785,931 + BWI76_RS22920 0.46 +1.0 4,785,935 + BWI76_RS22920 0.46 -1.0 4,785,962 - BWI76_RS22920 0.48 -0.8 4,785,978 + BWI76_RS22920 0.49 -0.5 4,786,053 - BWI76_RS22920 0.55 -0.4 4,786,113 + BWI76_RS22920 0.60 +2.0 4,786,124 + BWI76_RS22920 0.61 -0.5 4,786,132 - BWI76_RS22920 0.61 +0.0 4,786,323 - BWI76_RS22920 0.76 -0.7 4,786,514 - +0.0 4,786,524 - -0.7 4,786,759 + -0.5 4,786,820 - -0.1 4,786,948 - BWI76_RS22925 0.16 -1.0 4,787,415 + BWI76_RS22925 0.42 +1.0 4,787,423 - BWI76_RS22925 0.42 +0.7 4,787,439 - BWI76_RS22925 0.43 +0.4 4,787,633 - BWI76_RS22925 0.54 +1.1
Or see this region's nucleotide sequence