Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22920

Experiment: Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
4,784,356	+		BWI76_RS22915	0.36	-0.5
4,784,409	-		BWI76_RS22915	0.44	-0.6
4,784,409	-		BWI76_RS22915	0.44	+0.0
4,784,419	-		BWI76_RS22915	0.46	-0.3
4,784,495	+		BWI76_RS22915	0.57	+0.5
4,784,512	+				+1.0
4,784,558	+		BWI76_RS22915	0.67	-0.1
4,784,605	-		BWI76_RS22915	0.74	-0.3
4,784,605	-		BWI76_RS22915	0.74	-1.5
4,784,624	-		BWI76_RS22915	0.77	+0.5
4,784,641	+		BWI76_RS22915	0.80	-0.8
4,784,651	+		BWI76_RS22915	0.81	-0.5
4,784,664	-		BWI76_RS22915	0.83	+0.8
4,784,664	-		BWI76_RS22915	0.83	-0.7
4,784,670	-		BWI76_RS22915	0.84	+2.3
4,784,684	-		BWI76_RS22915	0.87	+0.2
4,784,684	-		BWI76_RS22915	0.87	-1.1
4,784,691	+		BWI76_RS22915	0.88	-2.7
4,784,699	-		BWI76_RS22915	0.89	-0.1
4,784,704	-		BWI76_RS22915	0.90	-0.5
4,784,704	-		BWI76_RS22915	0.90	-0.5
4,784,704	-		BWI76_RS22915	0.90	-1.0
4,784,704	-		BWI76_RS22915	0.90	+0.8
4,784,704	-		BWI76_RS22915	0.90	-0.6
4,784,704	-		BWI76_RS22915	0.90	+1.2
4,784,709	-				+0.9
4,784,709	-				-0.9
4,784,709	-				+1.2
4,784,709	-				-2.1
4,784,730	-				-0.5
4,784,730	-				+0.8
4,784,730	-				-0.9
4,784,730	-				-0.4
4,784,732	+				-2.7
4,784,740	-				-0.4
4,784,740	-				-0.5
4,784,740	-				+0.1
4,784,753	-				+0.0
4,784,762	-				-1.4
4,784,762	-				-1.5
4,784,762	-				-0.3
4,784,763	-				-0.1
4,784,763	-				-1.5
4,784,763	-				+1.0
4,784,767	-				-1.3
4,784,794	-				+2.0
4,784,827	-				-0.6
4,784,835	+				+1.0
4,784,835	+				+1.0
4,784,837	+				+1.0
4,784,843	-				+0.0
4,784,866	-				+1.0
4,784,887	-				-0.7
4,784,905	+				+1.0
4,784,905	+				-0.2
4,784,910	+				-1.2
4,784,910	+				+0.3
4,784,913	-				-0.3
4,784,913	-				+0.1
4,785,026	-				-0.4
4,785,149	+				+1.0
4,785,155	+				-1.1
4,785,230	+				+2.4
4,785,236	-				-1.3
4,785,248	-				+0.5
4,785,256	+				+0.5
4,785,265	+				-1.5
4,785,284	+				-2.4
4,785,285	+				+1.0
4,785,285	+				-0.5
4,785,285	+				+0.0
4,785,292	-				-2.3
4,785,293	-				-1.0
4,785,293	-				-1.9
4,785,308	+				-1.5
4,785,308	+				+0.0
4,785,308	+				-1.0
4,785,316	-				-1.0
4,785,316	-				+0.0
4,785,343	-				+1.4
4,785,368	+				-1.0
4,785,386	-				-1.2
4,785,394	+				-1.3
4,785,397	-				-0.5
4,785,397	-				+0.0
4,785,397	-				-1.0
4,785,402	-				+1.8
4,785,404	-				+0.0
4,785,410	-				-1.3
4,785,411	-				+0.5
4,785,416	-				+2.6
4,785,416	-				-0.5
4,785,416	-				+0.0
4,785,416	-				-1.5
4,785,416	-				-0.5
4,785,416	-				+0.0
4,785,421	-				-1.1
4,785,421	-				-0.3
4,785,495	-		BWI76_RS22920	0.13	+0.9
4,785,495	-		BWI76_RS22920	0.13	-1.0
4,785,495	-		BWI76_RS22920	0.13	-1.0
4,785,518	+		BWI76_RS22920	0.14	+0.0
4,785,561	-		BWI76_RS22920	0.18	-1.8
4,785,617	+		BWI76_RS22920	0.22	+1.0
4,785,617	+		BWI76_RS22920	0.22	-0.5
4,785,617	+		BWI76_RS22920	0.22	+1.0
4,785,620	-		BWI76_RS22920	0.22	-1.3
4,785,639	+		BWI76_RS22920	0.24	-0.2
4,785,639	+		BWI76_RS22920	0.24	+0.0
4,785,644	+		BWI76_RS22920	0.24	-1.5
4,785,644	+		BWI76_RS22920	0.24	-0.5
4,785,644	+		BWI76_RS22920	0.24	-2.5
4,785,644	+		BWI76_RS22920	0.24	-1.5
4,785,644	+		BWI76_RS22920	0.24	-2.3
4,785,644	+		BWI76_RS22920	0.24	+0.0
4,785,644	+		BWI76_RS22920	0.24	+1.0
4,785,644	+		BWI76_RS22920	0.24	-0.5
4,785,644	+		BWI76_RS22920	0.24	-1.5
4,785,647	-		BWI76_RS22920	0.24	+0.0
4,785,647	-		BWI76_RS22920	0.24	-1.8
4,785,652	-				+0.0
4,785,652	-		BWI76_RS22920	0.25	+0.5
4,785,652	-		BWI76_RS22920	0.25	+0.0
4,785,652	-		BWI76_RS22920	0.25	+1.0
4,785,652	-		BWI76_RS22920	0.25	+0.0
4,785,652	-		BWI76_RS22920	0.25	-1.0
4,785,652	-		BWI76_RS22920	0.25	-1.9
4,785,655	+		BWI76_RS22920	0.25	+0.5
4,785,663	+		BWI76_RS22920	0.25	-1.4
4,785,671	-				+1.0
4,785,676	+		BWI76_RS22920	0.26	+0.0
4,785,676	-		BWI76_RS22920	0.26	+1.0
4,785,695	+		BWI76_RS22920	0.28	-3.1
4,785,695	+		BWI76_RS22920	0.28	+1.5
4,785,703	-		BWI76_RS22920	0.28	+0.2
4,785,703	-		BWI76_RS22920	0.28	+1.0
4,785,711	+		BWI76_RS22920	0.29	+0.8
4,785,711	+		BWI76_RS22920	0.29	-1.3
4,785,711	+		BWI76_RS22920	0.29	+3.4
4,785,711	+		BWI76_RS22920	0.29	-0.3
4,785,711	+		BWI76_RS22920	0.29	+0.5
4,785,711	+		BWI76_RS22920	0.29	+0.0
4,785,711	+		BWI76_RS22920	0.29	-0.5
4,785,719	-		BWI76_RS22920	0.30	+1.0
4,785,719	-		BWI76_RS22920	0.30	-1.0
4,785,719	-		BWI76_RS22920	0.30	-1.3
4,785,719	-		BWI76_RS22920	0.30	+0.2
4,785,719	-		BWI76_RS22920	0.30	-1.0
4,785,779	+		BWI76_RS22920	0.34	-1.5
4,785,779	+		BWI76_RS22920	0.34	-0.5
4,785,779	+		BWI76_RS22920	0.34	-0.8
4,785,784	+		BWI76_RS22920	0.35	+0.8
4,785,784	+		BWI76_RS22920	0.35	+1.0
4,785,784	+		BWI76_RS22920	0.35	-2.3
4,785,785	+		BWI76_RS22920	0.35	-2.0
4,785,795	+		BWI76_RS22920	0.35	-1.5
4,785,802	+		BWI76_RS22920	0.36	-1.8
4,785,802	+		BWI76_RS22920	0.36	+0.0
4,785,804	+		BWI76_RS22920	0.36	-0.7
4,785,810	-		BWI76_RS22920	0.37	+0.0
4,785,819	-		BWI76_RS22920	0.37	+1.3
4,785,847	+		BWI76_RS22920	0.39	+0.0
4,785,847	+		BWI76_RS22920	0.39	+0.6
4,785,847	+		BWI76_RS22920	0.39	-2.1
4,785,847	+		BWI76_RS22920	0.39	-3.3
4,785,847	+		BWI76_RS22920	0.39	-0.9
4,785,855	-		BWI76_RS22920	0.40	+0.0
4,785,855	-		BWI76_RS22920	0.40	+0.6
4,785,856	+		BWI76_RS22920	0.40	-2.0
4,785,892	+		BWI76_RS22920	0.43	+1.3
4,785,901	+		BWI76_RS22920	0.44	-0.8
4,785,901	+		BWI76_RS22920	0.44	-1.0
4,785,909	-		BWI76_RS22920	0.44	-0.5
4,785,911	+		BWI76_RS22920	0.44	-0.3
4,785,911	+		BWI76_RS22920	0.44	-0.3
4,785,911	+		BWI76_RS22920	0.44	-0.2
4,785,911	+		BWI76_RS22920	0.44	+1.0
4,785,911	+		BWI76_RS22920	0.44	-1.6
4,785,919	-		BWI76_RS22920	0.45	-0.5
4,785,919	-		BWI76_RS22920	0.45	-0.8
4,785,919	-		BWI76_RS22920	0.45	-1.0
4,785,920	-		BWI76_RS22920	0.45	+1.0
4,785,921	+		BWI76_RS22920	0.45	-2.4
4,785,926	+		BWI76_RS22920	0.45	-0.3
4,785,926	+		BWI76_RS22920	0.45	-1.9
4,785,926	+		BWI76_RS22920	0.45	-1.3
4,785,931	+		BWI76_RS22920	0.46	-1.1
4,785,931	+		BWI76_RS22920	0.46	+1.0
4,785,935	+		BWI76_RS22920	0.46	-1.0
4,785,962	-		BWI76_RS22920	0.48	-0.8
4,785,978	+		BWI76_RS22920	0.49	-0.5
4,786,053	-		BWI76_RS22920	0.55	-0.4
4,786,113	+		BWI76_RS22920	0.60	+2.0
4,786,124	+		BWI76_RS22920	0.61	-0.5
4,786,132	-		BWI76_RS22920	0.61	+0.0
4,786,323	-		BWI76_RS22920	0.76	-0.7
4,786,514	-				+0.0
4,786,524	-				-0.7
4,786,759	+				-0.5
4,786,820	-				-0.1
4,786,948	-		BWI76_RS22925	0.16	-1.0
4,787,415	+		BWI76_RS22925	0.42	+1.0
4,787,423	-		BWI76_RS22925	0.42	+0.7
4,787,439	-		BWI76_RS22925	0.43	+0.4
4,787,633	-		BWI76_RS22925	0.54	+1.1