Experiment: Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20560 and BWI76_RS20565 are separated by 4 nucleotides BWI76_RS20565 and BWI76_RS20570 are separated by 57 nucleotides BWI76_RS20570 and BWI76_RS20575 are separated by 259 nucleotides BWI76_RS20575 and BWI76_RS20580 are separated by 44 nucleotides BWI76_RS20580 and BWI76_RS20585 are separated by 46 nucleotides BWI76_RS20585 and BWI76_RS20590 are separated by 4 nucleotides BWI76_RS20590 and BWI76_RS20595 are separated by 89 nucleotides
BWI76_RS20560: BWI76_RS20560 - hypothetical protein, at 4,306,510 to 4,306,863
_RS20560
BWI76_RS20565: BWI76_RS20565 - hypothetical protein, at 4,306,868 to 4,307,263
_RS20565
BWI76_RS20570: BWI76_RS20570 - glutamate--tRNA ligase, at 4,307,321 to 4,308,739
_RS20570
BWI76_RS20575: BWI76_RS20575 - tRNA-Val, at 4,308,999 to 4,309,074
_RS20575
BWI76_RS20580: BWI76_RS20580 - tRNA-Val, at 4,309,119 to 4,309,194
_RS20580
BWI76_RS20585: BWI76_RS20585 - tRNA-Val, at 4,309,241 to 4,309,316
_RS20585
BWI76_RS20590: BWI76_RS20590 - tRNA-Lys, at 4,309,321 to 4,309,396
_RS20590
BWI76_RS20595: BWI76_RS20595 - LysR family transcriptional regulator, at 4,309,486 to 4,310,370
_RS20595
Position (kb) 4307
4308
4309 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4306.344 kb on + strand at 4306.509 kb on - strand at 4306.531 kb on - strand at 4306.563 kb on - strand, within BWI76_RS20560 at 4306.637 kb on - strand, within BWI76_RS20560 at 4306.639 kb on - strand, within BWI76_RS20560 at 4307.110 kb on - strand, within BWI76_RS20565 at 4307.155 kb on - strand, within BWI76_RS20565 at 4307.185 kb on - strand, within BWI76_RS20565 at 4307.247 kb on - strand at 4309.435 kb on + strand at 4309.539 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM remove 4,306,344 + -0.2 4,306,509 - +0.5 4,306,531 - -0.6 4,306,563 - BWI76_RS20560 0.15 +0.3 4,306,637 - BWI76_RS20560 0.36 +0.3 4,306,639 - BWI76_RS20560 0.36 +1.2 4,307,110 - BWI76_RS20565 0.61 +0.4 4,307,155 - BWI76_RS20565 0.72 -0.2 4,307,185 - BWI76_RS20565 0.80 -1.1 4,307,247 - +0.0 4,309,435 + -3.4 4,309,539 + -0.2
Or see this region's nucleotide sequence