Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06845

Experiment: Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06835 and BWI76_RS06840 are separated by 176 nucleotidesBWI76_RS06840 and BWI76_RS06845 are separated by 127 nucleotidesBWI76_RS06845 and BWI76_RS06850 are separated by 63 nucleotides BWI76_RS06835: BWI76_RS06835 - molecular chaperone HtpG, at 1,433,098 to 1,434,972 _RS06835 BWI76_RS06840: BWI76_RS06840 - adenylate kinase, at 1,435,149 to 1,435,793 _RS06840 BWI76_RS06845: BWI76_RS06845 - ferrochelatase, at 1,435,921 to 1,436,883 _RS06845 BWI76_RS06850: BWI76_RS06850 - inosine/guanosine kinase, at 1,436,947 to 1,438,251 _RS06850 Position (kb) 1435 1436 1437Strain fitness (log2 ratio) -1 0 1at 1434.947 kb on + strandat 1434.985 kb on + strandat 1434.985 kb on + strandat 1434.991 kb on - strandat 1434.993 kb on - strandat 1434.993 kb on - strandat 1434.993 kb on - strandat 1435.869 kb on - strandat 1437.121 kb on + strand, within BWI76_RS06850at 1437.245 kb on - strand, within BWI76_RS06850at 1437.277 kb on + strand, within BWI76_RS06850at 1437.352 kb on - strand, within BWI76_RS06850at 1437.401 kb on + strand, within BWI76_RS06850at 1437.625 kb on - strand, within BWI76_RS06850at 1437.837 kb on + strand, within BWI76_RS06850

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
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1,434,947 + -0.0
1,434,985 + +0.4
1,434,985 + +0.0
1,434,991 - -0.1
1,434,993 - +0.6
1,434,993 - +0.6
1,434,993 - -0.1
1,435,869 - -1.4
1,437,121 + BWI76_RS06850 0.13 +0.9
1,437,245 - BWI76_RS06850 0.23 +0.1
1,437,277 + BWI76_RS06850 0.25 +0.6
1,437,352 - BWI76_RS06850 0.31 +0.1
1,437,401 + BWI76_RS06850 0.35 +0.1
1,437,625 - BWI76_RS06850 0.52 -0.0
1,437,837 + BWI76_RS06850 0.68 +0.9

Or see this region's nucleotide sequence