Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05145

Experiment: Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS05140 and BWI76_RS05145 are separated by 118 nucleotidesBWI76_RS05145 and BWI76_RS05150 are separated by 138 nucleotides BWI76_RS05140: BWI76_RS05140 - Fe3+-hydroxamate ABC transporter permease FhuB, at 1,080,069 to 1,082,051 _RS05140 BWI76_RS05145: BWI76_RS05145 - aspartate aminotransferase family protein, at 1,082,170 to 1,083,450 _RS05145 BWI76_RS05150: BWI76_RS05150 - ClC family H(+)/Cl(-) exchange transporter, at 1,083,589 to 1,085,049 _RS05150 Position (kb) 1082 1083 1084Strain fitness (log2 ratio) -2 -1 0 1at 1081.190 kb on - strand, within BWI76_RS05140at 1081.242 kb on - strand, within BWI76_RS05140at 1081.299 kb on + strand, within BWI76_RS05140at 1081.338 kb on - strand, within BWI76_RS05140at 1081.557 kb on + strand, within BWI76_RS05140at 1082.143 kb on - strandat 1083.661 kb on + strandat 1083.816 kb on - strand, within BWI76_RS05150at 1083.856 kb on + strand, within BWI76_RS05150at 1084.100 kb on + strand, within BWI76_RS05150at 1084.159 kb on + strand, within BWI76_RS05150at 1084.191 kb on - strand, within BWI76_RS05150at 1084.269 kb on - strand, within BWI76_RS05150at 1084.323 kb on + strand, within BWI76_RS05150at 1084.374 kb on + strand, within BWI76_RS05150at 1084.374 kb on + strand, within BWI76_RS05150at 1084.382 kb on - strand, within BWI76_RS05150at 1084.382 kb on - strand, within BWI76_RS05150at 1084.382 kb on - strand, within BWI76_RS05150at 1084.442 kb on - strand, within BWI76_RS05150

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
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1,081,190 - BWI76_RS05140 0.57 -1.4
1,081,242 - BWI76_RS05140 0.59 -0.0
1,081,299 + BWI76_RS05140 0.62 +0.8
1,081,338 - BWI76_RS05140 0.64 +1.2
1,081,557 + BWI76_RS05140 0.75 +0.1
1,082,143 - +1.3
1,083,661 + +0.3
1,083,816 - BWI76_RS05150 0.16 -1.0
1,083,856 + BWI76_RS05150 0.18 -0.3
1,084,100 + BWI76_RS05150 0.35 -0.3
1,084,159 + BWI76_RS05150 0.39 -0.2
1,084,191 - BWI76_RS05150 0.41 -1.8
1,084,269 - BWI76_RS05150 0.47 -0.2
1,084,323 + BWI76_RS05150 0.50 -1.3
1,084,374 + BWI76_RS05150 0.54 +0.3
1,084,374 + BWI76_RS05150 0.54 -0.6
1,084,382 - BWI76_RS05150 0.54 +1.0
1,084,382 - BWI76_RS05150 0.54 +0.4
1,084,382 - BWI76_RS05150 0.54 -1.0
1,084,442 - BWI76_RS05150 0.58 -0.3

Or see this region's nucleotide sequence