Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01390

Experiment: Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01385 and BWI76_RS01390 are separated by 11 nucleotidesBWI76_RS01390 and BWI76_RS01395 are separated by 387 nucleotides BWI76_RS01385: BWI76_RS01385 - potassium transporter, at 283,005 to 284,456 _RS01385 BWI76_RS01390: BWI76_RS01390 - protoporphyrinogen oxidase, at 284,468 to 285,001 _RS01390 BWI76_RS01395: BWI76_RS01395 - 16S ribosomal RNA, at 285,389 to 286,942 _RS01395 Position (kb) 284 285 286Strain fitness (log2 ratio) -3 -2 -1 0 1at 283.908 kb on - strand, within BWI76_RS01385at 283.931 kb on + strand, within BWI76_RS01385at 284.107 kb on - strand, within BWI76_RS01385at 284.314 kb on + strandat 284.460 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM
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283,908 - BWI76_RS01385 0.62 +0.1
283,931 + BWI76_RS01385 0.64 -1.5
284,107 - BWI76_RS01385 0.76 -1.1
284,314 + -3.5
284,460 - +0.0

Or see this region's nucleotide sequence