Experiment: Vogels_fungal_media 0.1X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26150 and BPHYT_RS26155 are separated by 45 nucleotides BPHYT_RS26155 and BPHYT_RS26160 are separated by 38 nucleotides BPHYT_RS26160 and BPHYT_RS26165 are separated by 56 nucleotides
BPHYT_RS26150: BPHYT_RS26150 - hypothetical protein, at 1,442,226 to 1,442,996
_RS26150
BPHYT_RS26155: BPHYT_RS26155 - carboxylesterase, at 1,443,042 to 1,443,911
_RS26155
BPHYT_RS26160: BPHYT_RS26160 - membrane protein, at 1,443,950 to 1,444,756
_RS26160
BPHYT_RS26165: BPHYT_RS26165 - hypothetical protein, at 1,444,813 to 1,445,517
_RS26165
Position (kb) 1443
1444 Strain fitness (log2 ratio) -2
-1
0
1 at 1442.066 kb on - strand at 1442.086 kb on + strand at 1442.218 kb on + strand at 1442.219 kb on - strand at 1442.452 kb on - strand, within BPHYT_RS26150 at 1442.481 kb on - strand, within BPHYT_RS26150 at 1442.617 kb on - strand, within BPHYT_RS26150 at 1442.720 kb on + strand, within BPHYT_RS26150 at 1442.862 kb on - strand, within BPHYT_RS26150 at 1442.894 kb on - strand, within BPHYT_RS26150 at 1443.177 kb on - strand, within BPHYT_RS26155 at 1443.417 kb on + strand, within BPHYT_RS26155 at 1443.736 kb on - strand, within BPHYT_RS26155 at 1444.142 kb on + strand, within BPHYT_RS26160 at 1444.511 kb on + strand, within BPHYT_RS26160 at 1444.603 kb on + strand, within BPHYT_RS26160 at 1444.604 kb on - strand, within BPHYT_RS26160 at 1444.754 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.1X remove 1,442,066 - +0.2 1,442,086 + -1.5 1,442,218 + +0.4 1,442,219 - +0.3 1,442,452 - BPHYT_RS26150 0.29 +0.7 1,442,481 - BPHYT_RS26150 0.33 +0.3 1,442,617 - BPHYT_RS26150 0.51 -0.1 1,442,720 + BPHYT_RS26150 0.64 +0.0 1,442,862 - BPHYT_RS26150 0.82 -1.9 1,442,894 - BPHYT_RS26150 0.87 -1.8 1,443,177 - BPHYT_RS26155 0.16 +0.1 1,443,417 + BPHYT_RS26155 0.43 -0.0 1,443,736 - BPHYT_RS26155 0.80 +0.4 1,444,142 + BPHYT_RS26160 0.24 -0.3 1,444,511 + BPHYT_RS26160 0.70 +0.2 1,444,603 + BPHYT_RS26160 0.81 -0.9 1,444,604 - BPHYT_RS26160 0.81 -1.2 1,444,754 + -0.8
Or see this region's nucleotide sequence