Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26630 and BWI76_RS26635 are separated by 111 nucleotides BWI76_RS26635 and BWI76_RS26640 are separated by 221 nucleotides BWI76_RS26640 and BWI76_RS26645 are separated by 9 nucleotides BWI76_RS26645 and BWI76_RS26650 are separated by 27 nucleotides BWI76_RS26650 and BWI76_RS26655 are separated by 411 nucleotides
BWI76_RS26630: BWI76_RS26630 - pimeloyl-[acyl-carrier protein] methyl ester esterase, at 5,513,047 to 5,513,829
_RS26630
BWI76_RS26635: BWI76_RS26635 - hypothetical protein, at 5,513,941 to 5,514,210
_RS26635
BWI76_RS26640: BWI76_RS26640 - ferrous iron transporter FeoC, at 5,514,432 to 5,514,668
_RS26640
BWI76_RS26645: BWI76_RS26645 - ferrous iron transporter B, at 5,514,678 to 5,516,996
_RS26645
BWI76_RS26650: BWI76_RS26650 - iron transporter, at 5,517,024 to 5,517,251
_RS26650
BWI76_RS26655: BWI76_RS26655 - transcription accessory protein, at 5,517,663 to 5,519,993
_RS26655
Position (kb) 5514
5515
5516
5517 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5513.797 kb on + strand at 5513.930 kb on + strand at 5513.984 kb on + strand, within BWI76_RS26635 at 5513.988 kb on + strand, within BWI76_RS26635 at 5513.996 kb on - strand, within BWI76_RS26635 at 5514.244 kb on + strand at 5514.298 kb on + strand at 5514.608 kb on - strand, within BWI76_RS26640 at 5514.764 kb on - strand at 5514.869 kb on - strand at 5514.999 kb on + strand, within BWI76_RS26645 at 5515.000 kb on + strand, within BWI76_RS26645 at 5515.007 kb on - strand, within BWI76_RS26645 at 5515.071 kb on + strand, within BWI76_RS26645 at 5515.117 kb on - strand, within BWI76_RS26645 at 5515.117 kb on - strand, within BWI76_RS26645 at 5515.180 kb on - strand, within BWI76_RS26645 at 5515.219 kb on + strand, within BWI76_RS26645 at 5515.227 kb on - strand, within BWI76_RS26645 at 5515.304 kb on + strand, within BWI76_RS26645 at 5515.312 kb on - strand, within BWI76_RS26645 at 5515.392 kb on - strand, within BWI76_RS26645 at 5515.397 kb on + strand, within BWI76_RS26645 at 5515.402 kb on + strand, within BWI76_RS26645 at 5515.405 kb on - strand, within BWI76_RS26645 at 5515.427 kb on - strand, within BWI76_RS26645 at 5515.627 kb on - strand, within BWI76_RS26645 at 5515.844 kb on + strand, within BWI76_RS26645 at 5515.951 kb on + strand, within BWI76_RS26645 at 5516.020 kb on - strand, within BWI76_RS26645 at 5516.035 kb on - strand, within BWI76_RS26645 at 5516.035 kb on - strand, within BWI76_RS26645 at 5516.061 kb on - strand, within BWI76_RS26645 at 5516.076 kb on - strand, within BWI76_RS26645 at 5516.162 kb on + strand, within BWI76_RS26645 at 5516.210 kb on + strand, within BWI76_RS26645 at 5516.210 kb on + strand, within BWI76_RS26645 at 5516.218 kb on - strand, within BWI76_RS26645 at 5516.220 kb on - strand, within BWI76_RS26645 at 5516.301 kb on - strand, within BWI76_RS26645 at 5516.312 kb on - strand, within BWI76_RS26645 at 5516.373 kb on + strand, within BWI76_RS26645 at 5516.419 kb on + strand, within BWI76_RS26645 at 5516.467 kb on - strand, within BWI76_RS26645 at 5516.687 kb on + strand, within BWI76_RS26645 at 5516.714 kb on + strand, within BWI76_RS26645 at 5516.818 kb on - strand at 5516.818 kb on - strand at 5516.821 kb on + strand at 5516.879 kb on + strand at 5516.879 kb on + strand at 5516.880 kb on - strand at 5516.891 kb on + strand at 5516.894 kb on - strand at 5516.894 kb on - strand at 5516.894 kb on - strand at 5516.899 kb on - strand at 5516.899 kb on - strand at 5516.899 kb on - strand at 5516.899 kb on - strand at 5516.899 kb on - strand at 5516.899 kb on - strand at 5516.901 kb on + strand at 5516.901 kb on + strand at 5516.901 kb on + strand at 5516.901 kb on + strand at 5516.901 kb on + strand at 5516.901 kb on + strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.909 kb on - strand at 5516.923 kb on + strand at 5516.923 kb on + strand at 5516.923 kb on + strand at 5516.923 kb on + strand at 5516.931 kb on - strand at 5516.931 kb on - strand at 5516.931 kb on - strand at 5516.931 kb on - strand at 5516.936 kb on - strand at 5516.950 kb on - strand at 5516.998 kb on + strand at 5517.074 kb on + strand, within BWI76_RS26650 at 5517.074 kb on + strand, within BWI76_RS26650 at 5517.074 kb on + strand, within BWI76_RS26650 at 5517.075 kb on + strand, within BWI76_RS26650 at 5517.082 kb on - strand, within BWI76_RS26650 at 5517.104 kb on + strand, within BWI76_RS26650 at 5517.117 kb on + strand, within BWI76_RS26650 at 5517.125 kb on - strand, within BWI76_RS26650 at 5517.130 kb on - strand, within BWI76_RS26650 at 5517.161 kb on + strand, within BWI76_RS26650 at 5517.161 kb on + strand, within BWI76_RS26650 at 5517.169 kb on - strand, within BWI76_RS26650 at 5517.169 kb on - strand, within BWI76_RS26650 at 5517.176 kb on - strand, within BWI76_RS26650 at 5517.177 kb on - strand, within BWI76_RS26650 at 5517.194 kb on + strand, within BWI76_RS26650 at 5517.202 kb on - strand, within BWI76_RS26650 at 5517.238 kb on + strand at 5517.238 kb on + strand at 5517.238 kb on + strand at 5517.238 kb on + strand at 5517.238 kb on + strand at 5517.240 kb on - strand at 5517.246 kb on - strand at 5517.246 kb on - strand at 5517.246 kb on - strand at 5517.248 kb on + strand at 5517.248 kb on + strand at 5517.248 kb on + strand at 5517.249 kb on + strand at 5517.253 kb on + strand at 5517.253 kb on + strand at 5517.253 kb on + strand at 5517.253 kb on + strand at 5517.253 kb on + strand at 5517.256 kb on - strand at 5517.261 kb on - strand at 5517.261 kb on - strand at 5517.261 kb on - strand at 5517.285 kb on + strand at 5517.293 kb on - strand at 5517.293 kb on - strand at 5517.311 kb on + strand at 5517.314 kb on + strand at 5517.318 kb on + strand at 5517.319 kb on + strand at 5517.319 kb on + strand at 5517.319 kb on - strand at 5517.326 kb on - strand at 5517.391 kb on + strand at 5517.446 kb on + strand at 5517.446 kb on + strand at 5517.455 kb on + strand at 5517.468 kb on + strand at 5517.468 kb on + strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.476 kb on - strand at 5517.497 kb on + strand at 5517.569 kb on + strand at 5517.576 kb on - strand at 5517.576 kb on - strand at 5517.599 kb on + strand at 5517.609 kb on + strand at 5517.611 kb on + strand at 5517.627 kb on - strand at 5517.627 kb on - strand at 5517.649 kb on - strand at 5517.702 kb on - strand at 5517.840 kb on + strand at 5517.843 kb on - strand at 5517.880 kb on + strand at 5517.888 kb on + strand at 5517.888 kb on - strand at 5517.904 kb on + strand, within BWI76_RS26655 at 5517.926 kb on - strand, within BWI76_RS26655 at 5517.947 kb on + strand, within BWI76_RS26655 at 5517.959 kb on + strand, within BWI76_RS26655 at 5517.969 kb on + strand, within BWI76_RS26655 at 5517.977 kb on - strand, within BWI76_RS26655
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 5,513,797 + +0.4 5,513,930 + +0.0 5,513,984 + BWI76_RS26635 0.16 +0.9 5,513,988 + BWI76_RS26635 0.17 +0.2 5,513,996 - BWI76_RS26635 0.20 +0.4 5,514,244 + +0.4 5,514,298 + -0.5 5,514,608 - BWI76_RS26640 0.74 +0.9 5,514,764 - +0.3 5,514,869 - +1.5 5,514,999 + BWI76_RS26645 0.14 -2.7 5,515,000 + BWI76_RS26645 0.14 -1.7 5,515,007 - BWI76_RS26645 0.14 -0.3 5,515,071 + BWI76_RS26645 0.17 -1.3 5,515,117 - BWI76_RS26645 0.19 +1.0 5,515,117 - BWI76_RS26645 0.19 -0.7 5,515,180 - BWI76_RS26645 0.22 -0.6 5,515,219 + BWI76_RS26645 0.23 -0.6 5,515,227 - BWI76_RS26645 0.24 +1.0 5,515,304 + BWI76_RS26645 0.27 -0.6 5,515,312 - BWI76_RS26645 0.27 -0.6 5,515,392 - BWI76_RS26645 0.31 -0.6 5,515,397 + BWI76_RS26645 0.31 -0.6 5,515,402 + BWI76_RS26645 0.31 +0.2 5,515,405 - BWI76_RS26645 0.31 +0.5 5,515,427 - BWI76_RS26645 0.32 -1.2 5,515,627 - BWI76_RS26645 0.41 -0.1 5,515,844 + BWI76_RS26645 0.50 +2.0 5,515,951 + BWI76_RS26645 0.55 -1.7 5,516,020 - BWI76_RS26645 0.58 -2.2 5,516,035 - BWI76_RS26645 0.59 -1.3 5,516,035 - BWI76_RS26645 0.59 -1.1 5,516,061 - BWI76_RS26645 0.60 +1.0 5,516,076 - BWI76_RS26645 0.60 -0.1 5,516,162 + BWI76_RS26645 0.64 +1.5 5,516,210 + BWI76_RS26645 0.66 -0.8 5,516,210 + BWI76_RS26645 0.66 -0.6 5,516,218 - BWI76_RS26645 0.66 +1.3 5,516,220 - BWI76_RS26645 0.66 -1.1 5,516,301 - BWI76_RS26645 0.70 -0.7 5,516,312 - BWI76_RS26645 0.70 +0.8 5,516,373 + BWI76_RS26645 0.73 +0.9 5,516,419 + BWI76_RS26645 0.75 +0.7 5,516,467 - BWI76_RS26645 0.77 -1.7 5,516,687 + BWI76_RS26645 0.87 -0.7 5,516,714 + BWI76_RS26645 0.88 +2.0 5,516,818 - -0.2 5,516,818 - +1.0 5,516,821 + -0.9 5,516,879 + +1.0 5,516,879 + -0.9 5,516,880 - -1.5 5,516,891 + -1.3 5,516,894 - +1.0 5,516,894 - +1.0 5,516,894 - +1.0 5,516,899 - -0.1 5,516,899 - -2.4 5,516,899 - +1.0 5,516,899 - -1.0 5,516,899 - +1.6 5,516,899 - -1.0 5,516,901 + -1.1 5,516,901 + +0.5 5,516,901 + +0.1 5,516,901 + -1.1 5,516,901 + +0.0 5,516,901 + -0.6 5,516,909 - -1.0 5,516,909 - +1.3 5,516,909 - +1.4 5,516,909 - +0.0 5,516,909 - +0.0 5,516,909 - -0.3 5,516,909 - -0.4 5,516,909 - +1.0 5,516,909 - -0.4 5,516,909 - -1.3 5,516,909 - -2.2 5,516,923 + +0.6 5,516,923 + +0.6 5,516,923 + -0.6 5,516,923 + -0.6 5,516,931 - -0.3 5,516,931 - -0.1 5,516,931 - -1.3 5,516,931 - -1.1 5,516,936 - -0.5 5,516,950 - -1.0 5,516,998 + -0.6 5,517,074 + BWI76_RS26650 0.22 -0.4 5,517,074 + BWI76_RS26650 0.22 +0.1 5,517,074 + BWI76_RS26650 0.22 +1.0 5,517,075 + BWI76_RS26650 0.22 -0.4 5,517,082 - BWI76_RS26650 0.25 -1.3 5,517,104 + BWI76_RS26650 0.35 +1.5 5,517,117 + BWI76_RS26650 0.41 -1.0 5,517,125 - BWI76_RS26650 0.44 +1.3 5,517,130 - BWI76_RS26650 0.46 -0.8 5,517,161 + BWI76_RS26650 0.60 -0.8 5,517,161 + BWI76_RS26650 0.60 -1.4 5,517,169 - BWI76_RS26650 0.64 +0.7 5,517,169 - BWI76_RS26650 0.64 -0.1 5,517,176 - BWI76_RS26650 0.67 -1.3 5,517,177 - BWI76_RS26650 0.67 +0.0 5,517,194 + BWI76_RS26650 0.75 -2.3 5,517,202 - BWI76_RS26650 0.78 +1.0 5,517,238 + -0.6 5,517,238 + +0.2 5,517,238 + -0.4 5,517,238 + -1.0 5,517,238 + +0.8 5,517,240 - -0.6 5,517,246 - -2.0 5,517,246 - -2.4 5,517,246 - -0.9 5,517,248 + +0.4 5,517,248 + -2.8 5,517,248 + -0.6 5,517,249 + +0.1 5,517,253 + +0.6 5,517,253 + -0.3 5,517,253 + +0.3 5,517,253 + -0.4 5,517,253 + +0.0 5,517,256 - -0.1 5,517,261 - +0.0 5,517,261 - +0.0 5,517,261 - -0.4 5,517,285 + -1.0 5,517,293 - +0.9 5,517,293 - -0.6 5,517,311 + +0.4 5,517,314 + +0.0 5,517,318 + -0.6 5,517,319 + -0.1 5,517,319 + -1.1 5,517,319 - -2.2 5,517,326 - -0.2 5,517,391 + -0.2 5,517,446 + -0.1 5,517,446 + -0.2 5,517,455 + -0.5 5,517,468 + +0.6 5,517,468 + +0.3 5,517,476 - -1.6 5,517,476 - +0.9 5,517,476 - -0.4 5,517,476 - +0.7 5,517,476 - -1.0 5,517,476 - -0.6 5,517,476 - -2.0 5,517,497 + +0.9 5,517,569 + +0.7 5,517,576 - +0.0 5,517,576 - -0.7 5,517,599 + -1.4 5,517,609 + -0.4 5,517,611 + +0.5 5,517,627 - -0.6 5,517,627 - +1.2 5,517,649 - -2.6 5,517,702 - -1.4 5,517,840 + +0.6 5,517,843 - -1.0 5,517,880 + +0.9 5,517,888 + -1.3 5,517,888 - +1.0 5,517,904 + BWI76_RS26655 0.10 +0.4 5,517,926 - BWI76_RS26655 0.11 -0.6 5,517,947 + BWI76_RS26655 0.12 -1.1 5,517,959 + BWI76_RS26655 0.13 -0.1 5,517,969 + BWI76_RS26655 0.13 -0.4 5,517,977 - BWI76_RS26655 0.13 +0.5
Or see this region's nucleotide sequence