Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25945 and BWI76_RS25950 are separated by 61 nucleotides BWI76_RS25950 and BWI76_RS25955 are separated by 4 nucleotides
BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773
_RS25945
BWI76_RS25950: BWI76_RS25950 - nicotinate phosphoribosyltransferase, at 5,364,835 to 5,366,325
_RS25950
BWI76_RS25955: BWI76_RS25955 - ribose-phosphate pyrophosphokinase, at 5,366,330 to 5,367,199
_RS25955
Position (kb)
5364
5365
5366
5367 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5364.492 kb on - strand, within BWI76_RS25945 at 5364.690 kb on + strand at 5364.703 kb on + strand at 5364.736 kb on + strand at 5364.841 kb on - strand at 5364.876 kb on + strand at 5364.884 kb on - strand at 5364.944 kb on - strand at 5365.072 kb on - strand, within BWI76_RS25950 at 5365.128 kb on - strand, within BWI76_RS25950 at 5365.288 kb on + strand, within BWI76_RS25950 at 5365.408 kb on + strand, within BWI76_RS25950 at 5365.416 kb on - strand, within BWI76_RS25950 at 5365.686 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.724 kb on + strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.727 kb on - strand, within BWI76_RS25950 at 5365.732 kb on - strand, within BWI76_RS25950 at 5365.870 kb on - strand, within BWI76_RS25950 at 5365.934 kb on - strand, within BWI76_RS25950 at 5366.113 kb on + strand, within BWI76_RS25950 at 5366.136 kb on - strand, within BWI76_RS25950 at 5366.453 kb on + strand at 5366.499 kb on - strand, within BWI76_RS25955 at 5366.516 kb on + strand, within BWI76_RS25955 at 5366.521 kb on + strand, within BWI76_RS25955 at 5366.522 kb on + strand, within BWI76_RS25955 at 5366.564 kb on - strand, within BWI76_RS25955 at 5366.619 kb on - strand, within BWI76_RS25955 at 5366.624 kb on - strand, within BWI76_RS25955 at 5366.705 kb on - strand, within BWI76_RS25955 at 5366.760 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.782 kb on + strand, within BWI76_RS25955 at 5366.788 kb on - strand, within BWI76_RS25955 at 5366.790 kb on - strand, within BWI76_RS25955 at 5366.876 kb on + strand, within BWI76_RS25955 at 5367.144 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 5,364,492 - BWI76_RS25945 0.85 -0.1 5,364,690 + -0.8 5,364,703 + -1.5 5,364,736 + -0.1 5,364,841 - +0.5 5,364,876 + +2.1 5,364,884 - -0.6 5,364,944 - +0.7 5,365,072 - BWI76_RS25950 0.16 +1.2 5,365,128 - BWI76_RS25950 0.20 -0.1 5,365,288 + BWI76_RS25950 0.30 +0.5 5,365,408 + BWI76_RS25950 0.38 +1.0 5,365,416 - BWI76_RS25950 0.39 +0.0 5,365,686 + BWI76_RS25950 0.57 -0.7 5,365,724 + BWI76_RS25950 0.60 -1.3 5,365,724 + BWI76_RS25950 0.60 +1.1 5,365,727 - BWI76_RS25950 0.60 +0.6 5,365,727 - BWI76_RS25950 0.60 +0.2 5,365,732 - BWI76_RS25950 0.60 +0.5 5,365,870 - BWI76_RS25950 0.69 +0.2 5,365,934 - BWI76_RS25950 0.74 +0.6 5,366,113 + BWI76_RS25950 0.86 +0.5 5,366,136 - BWI76_RS25950 0.87 -1.8 5,366,453 + -1.1 5,366,499 - BWI76_RS25955 0.19 -0.5 5,366,516 + BWI76_RS25955 0.21 +0.8 5,366,521 + BWI76_RS25955 0.22 -2.3 5,366,522 + BWI76_RS25955 0.22 -1.4 5,366,564 - BWI76_RS25955 0.27 +0.0 5,366,619 - BWI76_RS25955 0.33 -0.3 5,366,624 - BWI76_RS25955 0.34 +0.9 5,366,705 - BWI76_RS25955 0.43 +1.2 5,366,760 + BWI76_RS25955 0.49 +0.0 5,366,782 + BWI76_RS25955 0.52 -1.5 5,366,782 + BWI76_RS25955 0.52 -0.4 5,366,788 - BWI76_RS25955 0.53 +0.0 5,366,790 - BWI76_RS25955 0.53 -0.3 5,366,876 + BWI76_RS25955 0.63 -0.5 5,367,144 + -1.4
Or see this region's nucleotide sequence