Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25950

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25945 and BWI76_RS25950 are separated by 61 nucleotidesBWI76_RS25950 and BWI76_RS25955 are separated by 4 nucleotides BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773 _RS25945 BWI76_RS25950: BWI76_RS25950 - nicotinate phosphoribosyltransferase, at 5,364,835 to 5,366,325 _RS25950 BWI76_RS25955: BWI76_RS25955 - ribose-phosphate pyrophosphokinase, at 5,366,330 to 5,367,199 _RS25955 Position (kb) 5364 5365 5366 5367Strain fitness (log2 ratio) -2 -1 0 1 2at 5364.492 kb on - strand, within BWI76_RS25945at 5364.690 kb on + strandat 5364.703 kb on + strandat 5364.736 kb on + strandat 5364.841 kb on - strandat 5364.876 kb on + strandat 5364.884 kb on - strandat 5364.944 kb on - strandat 5365.072 kb on - strand, within BWI76_RS25950at 5365.128 kb on - strand, within BWI76_RS25950at 5365.288 kb on + strand, within BWI76_RS25950at 5365.408 kb on + strand, within BWI76_RS25950at 5365.416 kb on - strand, within BWI76_RS25950at 5365.686 kb on + strand, within BWI76_RS25950at 5365.724 kb on + strand, within BWI76_RS25950at 5365.724 kb on + strand, within BWI76_RS25950at 5365.727 kb on - strand, within BWI76_RS25950at 5365.727 kb on - strand, within BWI76_RS25950at 5365.732 kb on - strand, within BWI76_RS25950at 5365.870 kb on - strand, within BWI76_RS25950at 5365.934 kb on - strand, within BWI76_RS25950at 5366.113 kb on + strand, within BWI76_RS25950at 5366.136 kb on - strand, within BWI76_RS25950at 5366.453 kb on + strandat 5366.499 kb on - strand, within BWI76_RS25955at 5366.516 kb on + strand, within BWI76_RS25955at 5366.521 kb on + strand, within BWI76_RS25955at 5366.522 kb on + strand, within BWI76_RS25955at 5366.564 kb on - strand, within BWI76_RS25955at 5366.619 kb on - strand, within BWI76_RS25955at 5366.624 kb on - strand, within BWI76_RS25955at 5366.705 kb on - strand, within BWI76_RS25955at 5366.760 kb on + strand, within BWI76_RS25955at 5366.782 kb on + strand, within BWI76_RS25955at 5366.782 kb on + strand, within BWI76_RS25955at 5366.788 kb on - strand, within BWI76_RS25955at 5366.790 kb on - strand, within BWI76_RS25955at 5366.876 kb on + strand, within BWI76_RS25955at 5367.144 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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5,364,492 - BWI76_RS25945 0.85 -0.1
5,364,690 + -0.8
5,364,703 + -1.5
5,364,736 + -0.1
5,364,841 - +0.5
5,364,876 + +2.1
5,364,884 - -0.6
5,364,944 - +0.7
5,365,072 - BWI76_RS25950 0.16 +1.2
5,365,128 - BWI76_RS25950 0.20 -0.1
5,365,288 + BWI76_RS25950 0.30 +0.5
5,365,408 + BWI76_RS25950 0.38 +1.0
5,365,416 - BWI76_RS25950 0.39 +0.0
5,365,686 + BWI76_RS25950 0.57 -0.7
5,365,724 + BWI76_RS25950 0.60 -1.3
5,365,724 + BWI76_RS25950 0.60 +1.1
5,365,727 - BWI76_RS25950 0.60 +0.6
5,365,727 - BWI76_RS25950 0.60 +0.2
5,365,732 - BWI76_RS25950 0.60 +0.5
5,365,870 - BWI76_RS25950 0.69 +0.2
5,365,934 - BWI76_RS25950 0.74 +0.6
5,366,113 + BWI76_RS25950 0.86 +0.5
5,366,136 - BWI76_RS25950 0.87 -1.8
5,366,453 + -1.1
5,366,499 - BWI76_RS25955 0.19 -0.5
5,366,516 + BWI76_RS25955 0.21 +0.8
5,366,521 + BWI76_RS25955 0.22 -2.3
5,366,522 + BWI76_RS25955 0.22 -1.4
5,366,564 - BWI76_RS25955 0.27 +0.0
5,366,619 - BWI76_RS25955 0.33 -0.3
5,366,624 - BWI76_RS25955 0.34 +0.9
5,366,705 - BWI76_RS25955 0.43 +1.2
5,366,760 + BWI76_RS25955 0.49 +0.0
5,366,782 + BWI76_RS25955 0.52 -1.5
5,366,782 + BWI76_RS25955 0.52 -0.4
5,366,788 - BWI76_RS25955 0.53 +0.0
5,366,790 - BWI76_RS25955 0.53 -0.3
5,366,876 + BWI76_RS25955 0.63 -0.5
5,367,144 + -1.4

Or see this region's nucleotide sequence