Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20995
Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,389,326 | + | BWI76_RS20990 | 0.55 | -2.0 | |
4,389,339 | - | BWI76_RS20990 | 0.56 | -0.3 | |
4,389,339 | - | BWI76_RS20990 | 0.56 | +0.0 | |
4,389,526 | - | BWI76_RS20990 | 0.67 | +0.0 | |
4,389,743 | - | BWI76_RS20990 | 0.80 | -0.6 | |
4,389,843 | - | BWI76_RS20990 | 0.86 | +0.3 | |
4,389,843 | - | BWI76_RS20990 | 0.86 | -1.7 | |
4,389,860 | + | BWI76_RS20990 | 0.87 | +0.9 | |
4,389,868 | - | BWI76_RS20990 | 0.88 | -0.6 | |
4,389,923 | + | -1.2 | |||
4,389,931 | + | +0.1 | |||
4,389,974 | + | +1.0 | |||
4,389,997 | + | -1.6 | |||
4,390,000 | - | +0.9 | |||
4,390,049 | + | -1.0 | |||
4,390,231 | - | -1.3 | |||
4,390,241 | - | -2.6 | |||
4,390,246 | - | -2.6 | |||
4,390,246 | - | -2.0 | |||
4,390,446 | + | -2.6 | |||
4,390,446 | + | -2.8 | |||
4,390,476 | - | BWI76_RS20995 | 0.11 | -3.4 | |
4,390,617 | - | BWI76_RS20995 | 0.18 | -1.5 | |
4,391,043 | - | BWI76_RS20995 | 0.38 | -3.7 | |
4,391,302 | + | BWI76_RS20995 | 0.51 | -2.6 | |
4,391,642 | + | BWI76_RS20995 | 0.67 | -2.1 | |
4,392,555 | - | BWI76_RS21000 | 0.16 | +1.0 | |
4,392,635 | + | BWI76_RS21000 | 0.21 | -0.7 | |
4,393,187 | - | BWI76_RS21000 | 0.57 | -2.2 | |
4,393,289 | + | BWI76_RS21000 | 0.63 | +0.3 | |
4,393,289 | + | BWI76_RS21000 | 0.63 | +0.3 |
Or see this region's nucleotide sequence