Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20770 and BWI76_RS20775 overlap by 4 nucleotides BWI76_RS20775 and BWI76_RS20780 are separated by 170 nucleotides
BWI76_RS20770: BWI76_RS20770 - reactivating factor for ethanolamine ammonia lyase, at 4,341,070 to 4,342,473
_RS20770
BWI76_RS20775: BWI76_RS20775 - ethanolamine utilization protein EutH, at 4,342,470 to 4,343,702
_RS20775
BWI76_RS20780: BWI76_RS20780 - alcohol dehydrogenase EutG, at 4,343,873 to 4,345,060
_RS20780
Position (kb)
4342
4343
4344 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4341.646 kb on - strand, within BWI76_RS20770 at 4341.693 kb on + strand, within BWI76_RS20770 at 4341.907 kb on - strand, within BWI76_RS20770 at 4341.988 kb on - strand, within BWI76_RS20770 at 4342.093 kb on + strand, within BWI76_RS20770 at 4342.241 kb on + strand, within BWI76_RS20770 at 4342.241 kb on + strand, within BWI76_RS20770 at 4342.249 kb on - strand, within BWI76_RS20770 at 4342.395 kb on + strand at 4342.395 kb on + strand at 4342.608 kb on - strand, within BWI76_RS20775 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.335 kb on + strand, within BWI76_RS20775 at 4343.343 kb on - strand, within BWI76_RS20775 at 4343.551 kb on - strand, within BWI76_RS20775 at 4343.655 kb on - strand at 4343.675 kb on - strand at 4343.764 kb on + strand at 4343.826 kb on + strand at 4343.859 kb on + strand at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.170 kb on - strand, within BWI76_RS20780 at 4344.227 kb on + strand, within BWI76_RS20780 at 4344.306 kb on + strand, within BWI76_RS20780 at 4344.398 kb on + strand, within BWI76_RS20780 at 4344.467 kb on + strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 4,341,646 - BWI76_RS20770 0.41 +0.9 4,341,693 + BWI76_RS20770 0.44 -1.7 4,341,907 - BWI76_RS20770 0.60 +1.6 4,341,988 - BWI76_RS20770 0.65 -0.0 4,342,093 + BWI76_RS20770 0.73 -0.8 4,342,241 + BWI76_RS20770 0.83 -0.5 4,342,241 + BWI76_RS20770 0.83 -0.4 4,342,249 - BWI76_RS20770 0.84 -0.2 4,342,395 + +0.9 4,342,395 + +0.5 4,342,608 - BWI76_RS20775 0.11 -0.2 4,343,138 - BWI76_RS20775 0.54 -0.2 4,343,138 - BWI76_RS20775 0.54 +0.7 4,343,335 + BWI76_RS20775 0.70 +2.9 4,343,343 - BWI76_RS20775 0.71 +1.1 4,343,551 - BWI76_RS20775 0.88 +0.8 4,343,655 - -2.6 4,343,675 - +0.4 4,343,764 + -0.5 4,343,826 + +0.3 4,343,859 + +0.1 4,344,162 + BWI76_RS20780 0.24 +1.0 4,344,162 + BWI76_RS20780 0.24 +0.3 4,344,170 - BWI76_RS20780 0.25 +3.2 4,344,227 + BWI76_RS20780 0.30 -3.0 4,344,306 + BWI76_RS20780 0.36 -0.1 4,344,398 + BWI76_RS20780 0.44 -0.6 4,344,467 + BWI76_RS20780 0.50 +1.3 4,344,669 - BWI76_RS20780 0.67 +0.5 4,344,669 - BWI76_RS20780 0.67 +1.5
Or see this region's nucleotide sequence