Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17900 and BWI76_RS17905 are separated by 53 nucleotides BWI76_RS17905 and BWI76_RS17910 are separated by 106 nucleotides BWI76_RS17910 and BWI76_RS17915 are separated by 96 nucleotides BWI76_RS17915 and BWI76_RS17920 are separated by 3 nucleotides
BWI76_RS17900: BWI76_RS17900 - PTS mannose transporter subunit IID, at 3,723,421 to 3,724,272
_RS17900
BWI76_RS17905: BWI76_RS17905 - hypothetical protein, at 3,724,326 to 3,724,784
_RS17905
BWI76_RS17910: BWI76_RS17910 - hypothetical protein, at 3,724,891 to 3,725,112
_RS17910
BWI76_RS17915: BWI76_RS17915 - membrane protein, at 3,725,209 to 3,725,775
_RS17915
BWI76_RS17920: BWI76_RS17920 - 23S rRNA (guanine(745)-N(1))-methyltransferase, at 3,725,779 to 3,726,573
_RS17920
Position (kb)
3724
3725
3726 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 3723.895 kb on + strand, within BWI76_RS17900 at 3724.101 kb on + strand, within BWI76_RS17900 at 3724.156 kb on + strand, within BWI76_RS17900 at 3724.210 kb on - strand at 3724.277 kb on - strand at 3724.348 kb on - strand at 3724.352 kb on - strand at 3724.383 kb on - strand, within BWI76_RS17905 at 3724.432 kb on + strand, within BWI76_RS17905 at 3724.432 kb on + strand, within BWI76_RS17905 at 3724.440 kb on - strand, within BWI76_RS17905 at 3724.450 kb on - strand, within BWI76_RS17905 at 3724.465 kb on + strand, within BWI76_RS17905 at 3724.466 kb on + strand, within BWI76_RS17905 at 3724.488 kb on - strand, within BWI76_RS17905 at 3724.526 kb on + strand, within BWI76_RS17905 at 3724.527 kb on + strand, within BWI76_RS17905 at 3724.527 kb on - strand, within BWI76_RS17905 at 3724.551 kb on + strand, within BWI76_RS17905 at 3724.551 kb on + strand, within BWI76_RS17905 at 3724.554 kb on - strand, within BWI76_RS17905 at 3724.557 kb on + strand, within BWI76_RS17905 at 3724.558 kb on + strand, within BWI76_RS17905 at 3724.564 kb on - strand, within BWI76_RS17905 at 3724.564 kb on - strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.567 kb on + strand, within BWI76_RS17905 at 3724.575 kb on - strand, within BWI76_RS17905 at 3724.575 kb on - strand, within BWI76_RS17905 at 3724.575 kb on - strand, within BWI76_RS17905 at 3724.575 kb on - strand, within BWI76_RS17905 at 3724.599 kb on - strand, within BWI76_RS17905 at 3724.601 kb on - strand, within BWI76_RS17905 at 3724.603 kb on + strand, within BWI76_RS17905 at 3724.603 kb on + strand, within BWI76_RS17905 at 3724.603 kb on + strand, within BWI76_RS17905 at 3724.619 kb on - strand, within BWI76_RS17905 at 3724.684 kb on + strand, within BWI76_RS17905 at 3724.692 kb on - strand, within BWI76_RS17905 at 3724.712 kb on - strand, within BWI76_RS17905 at 3724.801 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.835 kb on - strand at 3724.840 kb on - strand at 3724.980 kb on + strand, within BWI76_RS17910 at 3725.035 kb on - strand, within BWI76_RS17910 at 3725.063 kb on - strand, within BWI76_RS17910 at 3725.069 kb on + strand, within BWI76_RS17910 at 3725.074 kb on + strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.089 kb on + strand, within BWI76_RS17910 at 3725.099 kb on + strand at 3725.099 kb on + strand at 3725.108 kb on - strand at 3725.109 kb on - strand at 3725.110 kb on + strand at 3725.118 kb on - strand at 3725.118 kb on - strand at 3725.189 kb on + strand at 3725.326 kb on + strand, within BWI76_RS17915 at 3725.334 kb on - strand, within BWI76_RS17915 at 3725.334 kb on - strand, within BWI76_RS17915 at 3725.576 kb on + strand, within BWI76_RS17915 at 3725.623 kb on + strand, within BWI76_RS17915 at 3725.631 kb on - strand, within BWI76_RS17915 at 3725.728 kb on - strand at 3725.743 kb on + strand at 3725.926 kb on - strand, within BWI76_RS17920 at 3725.979 kb on + strand, within BWI76_RS17920
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 3,723,895 + BWI76_RS17900 0.56 -0.0 3,724,101 + BWI76_RS17900 0.80 +0.4 3,724,156 + BWI76_RS17900 0.86 +0.2 3,724,210 - -1.0 3,724,277 - +0.1 3,724,348 - +0.2 3,724,352 - +0.3 3,724,383 - BWI76_RS17905 0.12 -0.7 3,724,432 + BWI76_RS17905 0.23 -1.0 3,724,432 + BWI76_RS17905 0.23 -0.0 3,724,440 - BWI76_RS17905 0.25 +0.4 3,724,450 - BWI76_RS17905 0.27 +0.2 3,724,465 + BWI76_RS17905 0.30 -0.4 3,724,466 + BWI76_RS17905 0.31 -0.2 3,724,488 - BWI76_RS17905 0.35 +0.1 3,724,526 + BWI76_RS17905 0.44 -2.3 3,724,527 + BWI76_RS17905 0.44 +1.0 3,724,527 - BWI76_RS17905 0.44 +0.2 3,724,551 + BWI76_RS17905 0.49 -0.3 3,724,551 + BWI76_RS17905 0.49 -1.0 3,724,554 - BWI76_RS17905 0.50 -2.2 3,724,557 + BWI76_RS17905 0.50 -0.6 3,724,558 + BWI76_RS17905 0.51 +0.2 3,724,564 - BWI76_RS17905 0.52 +1.9 3,724,564 - BWI76_RS17905 0.52 +0.6 3,724,567 + BWI76_RS17905 0.53 +0.3 3,724,567 + -1.4 3,724,567 + BWI76_RS17905 0.53 -0.5 3,724,567 + BWI76_RS17905 0.53 -1.2 3,724,567 + BWI76_RS17905 0.53 +0.2 3,724,567 + BWI76_RS17905 0.53 -3.2 3,724,567 + BWI76_RS17905 0.53 -0.9 3,724,567 + BWI76_RS17905 0.53 +1.4 3,724,567 + BWI76_RS17905 0.53 +1.2 3,724,567 + BWI76_RS17905 0.53 -0.3 3,724,567 + BWI76_RS17905 0.53 -1.7 3,724,567 + BWI76_RS17905 0.53 -0.6 3,724,567 + BWI76_RS17905 0.53 +0.4 3,724,575 - BWI76_RS17905 0.54 +3.5 3,724,575 - BWI76_RS17905 0.54 -0.5 3,724,575 - BWI76_RS17905 0.54 +3.5 3,724,575 - BWI76_RS17905 0.54 +0.1 3,724,599 - BWI76_RS17905 0.59 -0.7 3,724,601 - BWI76_RS17905 0.60 -1.0 3,724,603 + BWI76_RS17905 0.60 +0.5 3,724,603 + BWI76_RS17905 0.60 -4.2 3,724,603 + BWI76_RS17905 0.60 -0.3 3,724,619 - BWI76_RS17905 0.64 -1.9 3,724,684 + BWI76_RS17905 0.78 -0.9 3,724,692 - BWI76_RS17905 0.80 +0.7 3,724,712 - BWI76_RS17905 0.84 +0.4 3,724,801 + +0.7 3,724,806 + +0.2 3,724,806 + +0.2 3,724,806 + -0.0 3,724,806 + +0.3 3,724,835 - -0.9 3,724,840 - +0.4 3,724,980 + BWI76_RS17910 0.40 -2.3 3,725,035 - BWI76_RS17910 0.65 -0.7 3,725,063 - BWI76_RS17910 0.77 -1.1 3,725,069 + BWI76_RS17910 0.80 -0.9 3,725,074 + BWI76_RS17910 0.82 -1.4 3,725,077 - BWI76_RS17910 0.84 -4.4 3,725,077 - BWI76_RS17910 0.84 -0.7 3,725,077 - BWI76_RS17910 0.84 -3.4 3,725,089 + BWI76_RS17910 0.89 -3.8 3,725,099 + +0.9 3,725,099 + -4.1 3,725,108 - -1.7 3,725,109 - -0.5 3,725,110 + -2.9 3,725,118 - -1.6 3,725,118 - -5.5 3,725,189 + -3.6 3,725,326 + BWI76_RS17915 0.21 -3.1 3,725,334 - BWI76_RS17915 0.22 -3.4 3,725,334 - BWI76_RS17915 0.22 -2.3 3,725,576 + BWI76_RS17915 0.65 -2.3 3,725,623 + BWI76_RS17915 0.73 -4.1 3,725,631 - BWI76_RS17915 0.74 -3.6 3,725,728 - -2.8 3,725,743 + -1.6 3,725,926 - BWI76_RS17920 0.18 +0.6 3,725,979 + BWI76_RS17920 0.25 -1.4
Or see this region's nucleotide sequence