Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13305

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13300 and BWI76_RS13305 are separated by 172 nucleotidesBWI76_RS13305 and BWI76_RS13310 are separated by 270 nucleotides BWI76_RS13300: BWI76_RS13300 - carboxylesterase, at 2,772,984 to 2,774,492 _RS13300 BWI76_RS13305: BWI76_RS13305 - hydrolase, at 2,774,665 to 2,775,288 _RS13305 BWI76_RS13310: BWI76_RS13310 - glucan biosynthesis protein D, at 2,775,559 to 2,777,214 _RS13310 Position (kb) 2774 2775 2776Strain fitness (log2 ratio) -1 0 1at 2773.727 kb on + strand, within BWI76_RS13300at 2774.106 kb on + strand, within BWI76_RS13300at 2774.508 kb on + strandat 2775.271 kb on - strandat 2775.312 kb on - strandat 2775.448 kb on - strandat 2775.795 kb on + strand, within BWI76_RS13310at 2775.967 kb on - strand, within BWI76_RS13310at 2776.020 kb on - strand, within BWI76_RS13310at 2776.116 kb on + strand, within BWI76_RS13310at 2776.276 kb on - strand, within BWI76_RS13310

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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2,773,727 + BWI76_RS13300 0.49 -1.1
2,774,106 + BWI76_RS13300 0.74 -0.4
2,774,508 + -0.4
2,775,271 - -0.2
2,775,312 - +0.1
2,775,448 - -0.9
2,775,795 + BWI76_RS13310 0.14 -0.1
2,775,967 - BWI76_RS13310 0.25 -0.6
2,776,020 - BWI76_RS13310 0.28 -1.0
2,776,116 + BWI76_RS13310 0.34 +0.2
2,776,276 - BWI76_RS13310 0.43 +0.1

Or see this region's nucleotide sequence